RNA–Protein interactions for RNA: ENST00000576069.5

SPNS3-206, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-206ENST00000576069 GPATCH8Q9UKJ3 1502 aaKnown RBP30.47■■■□□ 2.47
SPNS3-206ENST00000576069 LRRC9Q6ZRR7 1453 aa30.47■■■□□ 2.47
SPNS3-206ENST00000576069 CCNB3Q8WWL7 1395 aa30.47■■■□□ 2.47
SPNS3-206ENST00000576069 ADGRL1O94910 1474 aa30.46■■■□□ 2.47
SPNS3-206ENST00000576069 PREX2Q70Z35 1606 aa30.45■■■□□ 2.47
SPNS3-206ENST00000576069 SCAPERQ9BY12 1400 aa30.45■■■□□ 2.46
SPNS3-206ENST00000576069 KANK4Q5T7N3 995 aaPredicted RBP30.44■■■□□ 2.46
SPNS3-206ENST00000576069 CDC42BPBQ9Y5S2 1711 aa30.44■■■□□ 2.46
SPNS3-206ENST00000576069 CDC42BPAQ5VT25 1732 aa30.42■■■□□ 2.46
SPNS3-206ENST00000576069 CFDP1Q9UEE9 299 aaPredicted RBP30.4■■■□□ 2.46
SPNS3-206ENST00000576069 NCOA2Q15596 1464 aa30.38■■■□□ 2.45
SPNS3-206ENST00000576069 SUPT6HQ7KZ85 1726 aaKnown RBP30.38■■■□□ 2.45
SPNS3-206ENST00000576069 FRMPD1Q5SYB0 1578 aa30.37■■■□□ 2.45
SPNS3-206ENST00000576069 POGZQ7Z3K3 1410 aa30.36■■■□□ 2.45
SPNS3-206ENST00000576069 RICTORQ6R327 1708 aa30.34■■■□□ 2.45
SPNS3-206ENST00000576069 ZNF777Q9ULD5 760 aaPredicted RBP30.34■■■□□ 2.45
SPNS3-206ENST00000576069 ABCC1P33527 1531 aa30.29■■■□□ 2.44
SPNS3-206ENST00000576069 ZMYM4Q5VZL5 1548 aa30.29■■■□□ 2.44
SPNS3-206ENST00000576069 ZNF518AQ6AHZ1 1483 aa30.29■■■□□ 2.44
SPNS3-206ENST00000576069 MAGI2Q86UL8 1455 aa30.29■■■□□ 2.44
SPNS3-206ENST00000576069 AFAP1Q8N556 730 aa30.28■■■□□ 2.44
SPNS3-206ENST00000576069 KIAA1107Q9UPP5 1409 aa30.28■■■□□ 2.44
SPNS3-206ENST00000576069 ARHGEF12Q9NZN5 1544 aa30.27■■■□□ 2.44
SPNS3-206ENST00000576069 ITSN2Q9NZM3 1697 aa30.27■■■□□ 2.44
SPNS3-206ENST00000576069 PLEKHH2Q8IVE3 1493 aa30.27■■■□□ 2.44
SPNS3-206ENST00000576069 SAMD9LQ8IVG5 1584 aa30.26■■■□□ 2.43
SPNS3-206ENST00000576069 TRAPPC8Q9Y2L5 1435 aa30.23■■■□□ 2.43
SPNS3-206ENST00000576069 HNRNPMP52272 730 aaKnown RBP eCLIP30.23■■■□□ 2.43
SPNS3-206ENST00000576069 ZNF644Q9H582 1327 aaPredicted RBP30.21■■■□□ 2.43
SPNS3-206ENST00000576069 KDM5CP41229 1560 aa30.2■■■□□ 2.43
SPNS3-206ENST00000576069 ZFYVE16Q7Z3T8 1539 aa30.17■■■□□ 2.42
SPNS3-206ENST00000576069 SYCP2Q9BX26 1530 aa30.17■■■□□ 2.42
SPNS3-206ENST00000576069 YEATS2Q9ULM3 1422 aa30.17■■■□□ 2.42
SPNS3-206ENST00000576069 ARHGEF40Q8TER5 1519 aa30.17■■■□□ 2.42
SPNS3-206ENST00000576069 MYOM3Q5VTT5 1437 aa30.16■■■□□ 2.42
SPNS3-206ENST00000576069 MLH3Q9UHC1 1453 aa30.16■■■□□ 2.42
SPNS3-206ENST00000576069 MIA2Q96PC5 1412 aa30.15■■■□□ 2.42
SPNS3-206ENST00000576069 KDM4FA0A1W2PPD8 638 aa30.14■■■□□ 2.42
SPNS3-206ENST00000576069 RSPH4AQ5TD94 716 aa30.13■■■□□ 2.41
SPNS3-206ENST00000576069 MYT1LQ9UL68 1186 aa30.13■■■□□ 2.41
SPNS3-206ENST00000576069 MBD5Q9P267 1494 aa30.12■■■□□ 2.41
SPNS3-206ENST00000576069 CAMSAP2Q08AD1 1489 aa30.11■■■□□ 2.41
SPNS3-206ENST00000576069 SPAG9O60271 1321 aaKnown RBP30.1■■■□□ 2.41
SPNS3-206ENST00000576069 ATP10AO60312 1499 aa30.1■■■□□ 2.41
SPNS3-206ENST00000576069 HECW2Q9P2P5 1572 aa30.1■■■□□ 2.41
SPNS3-206ENST00000576069 ARID4BQ4LE39 1312 aaPredicted RBP30.06■■■□□ 2.4
SPNS3-206ENST00000576069 C9orf84Q5VXU9 1444 aa30.04■■■□□ 2.4
SPNS3-206ENST00000576069 AEBP2Q6ZN18 517 aaPredicted RBP30.02■■■□□ 2.4
SPNS3-206ENST00000576069 KIDINS220Q9ULH0 1771 aa30■■■□□ 2.39
SPNS3-206ENST00000576069 CCDC141Q6ZP82 1450 aa30■■■□□ 2.39
SPNS3-206ENST00000576069 DIP2CQ9Y2E4 1556 aa29.99■■■□□ 2.39
SPNS3-206ENST00000576069 RTEL1-TNFRSF6BF6WH68 1400 aa29.99■■■□□ 2.39
SPNS3-206ENST00000576069 FGD6Q6ZV73 1430 aa29.99■■■□□ 2.39
SPNS3-206ENST00000576069 ARHGEF5Q12774 1597 aa29.98■■■□□ 2.39
SPNS3-206ENST00000576069 TSPY4P0CV99 314 aa29.98■■■□□ 2.39
SPNS3-206ENST00000576069 TSPY10P0CW01 314 aa29.98■■■□□ 2.39
SPNS3-206ENST00000576069 ATP7AQ04656 1500 aa29.96■■■□□ 2.39
SPNS3-206ENST00000576069 REREQ9P2R6 1566 aa29.96■■■□□ 2.39
SPNS3-206ENST00000576069 ABCA6Q8N139 1617 aa29.96■■■□□ 2.39
SPNS3-206ENST00000576069 INO80Q9ULG1 1556 aaPredicted RBP29.94■■■□□ 2.38
SPNS3-206ENST00000576069 PTPN23Q9H3S7 1636 aa29.93■■■□□ 2.38
SPNS3-206ENST00000576069 TCOF1Q13428 1488 aaKnown RBP29.93■■■□□ 2.38
SPNS3-206ENST00000576069 PPARGC1BQ86YN6 1023 aaKnown RBP29.92■■■□□ 2.38
SPNS3-206ENST00000576069 BCORL1Q5H9F3 1711 aa29.91■■■□□ 2.38
SPNS3-206ENST00000576069 SIGLEC1Q9BZZ2 1709 aa29.91■■■□□ 2.38
SPNS3-206ENST00000576069 AGLP35573 1532 aa29.88■■■□□ 2.37
SPNS3-206ENST00000576069 ADAMTSL3P82987 1691 aa29.88■■■□□ 2.37
SPNS3-206ENST00000576069 MLECQ14165 292 aa29.85■■■□□ 2.37
SPNS3-206ENST00000576069 A2MP01023 1474 aa29.85■■■□□ 2.37
SPNS3-206ENST00000576069 ABCC5O15440 1437 aa29.83■■■□□ 2.37
SPNS3-206ENST00000576069 MAST1Q9Y2H9 1570 aa29.82■■■□□ 2.36
SPNS3-206ENST00000576069 DHX29Q7Z478 1369 aaKnown RBP29.81■■■□□ 2.36
SPNS3-206ENST00000576069 FAM50AQ14320 339 aaKnown RBP29.81■■■□□ 2.36
SPNS3-206ENST00000576069 DAPK1P53355 1430 aa29.79■■■□□ 2.36
SPNS3-206ENST00000576069 ADGBQ8N7X0 1667 aa29.79■■■□□ 2.36
SPNS3-206ENST00000576069 PLXNC1O60486 1568 aa29.78■■■□□ 2.36
SPNS3-206ENST00000576069 SHANK2Q9UPX8 1470 aa29.78■■■□□ 2.36
SPNS3-206ENST00000576069 DNMT1P26358 1616 aaKnown RBP29.76■■■□□ 2.35
SPNS3-206ENST00000576069 MADDQ8WXG6 1647 aa29.76■■■□□ 2.35
SPNS3-206ENST00000576069 PTPRMP28827 1452 aa29.74■■■□□ 2.35
SPNS3-206ENST00000576069 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.72■■■□□ 2.35
SPNS3-206ENST00000576069 PPP6R1Q9UPN7 881 aa29.69■■■□□ 2.34
SPNS3-206ENST00000576069 CROCC2H7BZ55 1655 aa29.69■■■□□ 2.34
SPNS3-206ENST00000576069 ESF1Q9H501 851 aaKnown RBP29.68■■■□□ 2.34
SPNS3-206ENST00000576069 CHIC2Q9UKJ5 165 aa29.67■■■□□ 2.34
SPNS3-206ENST00000576069 KIF3BO15066 747 aa29.66■■■□□ 2.34
SPNS3-206ENST00000576069 GGT6Q6P531 493 aa29.66■■■□□ 2.34
SPNS3-206ENST00000576069 ANKRD30AQ9BXX3 1397 aa29.65■■■□□ 2.34
SPNS3-206ENST00000576069 RRP7BPQ9NSQ0 103 aa29.65■■■□□ 2.34
SPNS3-206ENST00000576069 RIMS1Q86UR5 1692 aaKnown RBP29.65■■■□□ 2.34
SPNS3-206ENST00000576069 FER1L4A9Z1Z3 1794 aa29.64■■■□□ 2.34
SPNS3-206ENST00000576069 RRBP1Q9P2E9 1410 aaKnown RBP29.64■■■□□ 2.34
SPNS3-206ENST00000576069 KIF15Q9NS87 1388 aa29.64■■■□□ 2.33
SPNS3-206ENST00000576069 NCOA1Q15788 1441 aa29.62■■■□□ 2.33
SPNS3-206ENST00000576069 DUOX2Q9NRD8 1548 aa29.62■■■□□ 2.33
SPNS3-206ENST00000576069 CNTLNQ9NXG0 1405 aa29.62■■■□□ 2.33
SPNS3-206ENST00000576069 ADGRL2O95490 1459 aa29.61■■■□□ 2.33
SPNS3-206ENST00000576069 PTPRKQ15262 1439 aa29.57■■■□□ 2.32
SPNS3-206ENST00000576069 ERBINQ96RT1 1412 aa29.55■■■□□ 2.32
SPNS3-206ENST00000576069 EIF2AK4Q9P2K8 1649 aaKnown RBP29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms