RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 EHBP1L1Q8N3D4 1523 aa23.47■■□□□ 1.35
TRAPPC1-207ENST00000575639 DENND4BO75064 1496 aaPredicted RBP23.46■■□□□ 1.35
TRAPPC1-207ENST00000575639 ARHGAP5Q13017 1502 aa23.46■■□□□ 1.35
TRAPPC1-207ENST00000575639 MAP3K1Q13233 1512 aa23.46■■□□□ 1.35
TRAPPC1-207ENST00000575639 CFAP74Q9C0B2 1584 aa23.45■■□□□ 1.34
TRAPPC1-207ENST00000575639 CFDP1Q9UEE9 299 aaPredicted RBP23.45■■□□□ 1.34
TRAPPC1-207ENST00000575639 TIAM1Q13009 1591 aa23.44■■□□□ 1.34
TRAPPC1-207ENST00000575639 SCAPERQ9BY12 1400 aa23.44■■□□□ 1.34
TRAPPC1-207ENST00000575639 KANK4Q5T7N3 995 aaPredicted RBP23.42■■□□□ 1.34
TRAPPC1-207ENST00000575639 ZNF777Q9ULD5 760 aaPredicted RBP23.42■■□□□ 1.34
TRAPPC1-207ENST00000575639 GPATCH8Q9UKJ3 1502 aaKnown RBP23.42■■□□□ 1.34
TRAPPC1-207ENST00000575639 LRRC9Q6ZRR7 1453 aa23.42■■□□□ 1.34
TRAPPC1-207ENST00000575639 MYO5CQ9NQX4 1742 aa23.4■■□□□ 1.34
TRAPPC1-207ENST00000575639 NCOA2Q15596 1464 aa23.36■■□□□ 1.33
TRAPPC1-207ENST00000575639 POGZQ7Z3K3 1410 aa23.34■■□□□ 1.33
TRAPPC1-207ENST00000575639 PREX2Q70Z35 1606 aa23.33■■□□□ 1.33
TRAPPC1-207ENST00000575639 AFAP1Q8N556 730 aa23.33■■□□□ 1.33
TRAPPC1-207ENST00000575639 MYT1LQ9UL68 1186 aa23.31■■□□□ 1.32
TRAPPC1-207ENST00000575639 SUPT6HQ7KZ85 1726 aaKnown RBP23.3■■□□□ 1.32
TRAPPC1-207ENST00000575639 ZNF518AQ6AHZ1 1483 aa23.3■■□□□ 1.32
TRAPPC1-207ENST00000575639 PLEKHH2Q8IVE3 1493 aa23.3■■□□□ 1.32
TRAPPC1-207ENST00000575639 HNRNPMP52272 730 aaKnown RBP eCLIP23.29■■□□□ 1.32
TRAPPC1-207ENST00000575639 CDC42BPBQ9Y5S2 1711 aa23.28■■□□□ 1.32
TRAPPC1-207ENST00000575639 KIAA1107Q9UPP5 1409 aa23.28■■□□□ 1.32
TRAPPC1-207ENST00000575639 MAGI2Q86UL8 1455 aa23.28■■□□□ 1.32
TRAPPC1-207ENST00000575639 FRMPD1Q5SYB0 1578 aa23.27■■□□□ 1.32
TRAPPC1-207ENST00000575639 CDC42BPAQ5VT25 1732 aa23.26■■□□□ 1.31
TRAPPC1-207ENST00000575639 ZNF644Q9H582 1327 aaPredicted RBP23.26■■□□□ 1.31
TRAPPC1-207ENST00000575639 TRAPPC8Q9Y2L5 1435 aa23.25■■□□□ 1.31
TRAPPC1-207ENST00000575639 ABCC1P33527 1531 aa23.24■■□□□ 1.31
TRAPPC1-207ENST00000575639 ZMYM4Q5VZL5 1548 aa23.23■■□□□ 1.31
TRAPPC1-207ENST00000575639 ARHGEF12Q9NZN5 1544 aa23.23■■□□□ 1.31
TRAPPC1-207ENST00000575639 ARID4BQ4LE39 1312 aaPredicted RBP23.23■■□□□ 1.31
TRAPPC1-207ENST00000575639 RSPH4AQ5TD94 716 aa23.22■■□□□ 1.31
TRAPPC1-207ENST00000575639 RICTORQ6R327 1708 aa23.22■■□□□ 1.31
TRAPPC1-207ENST00000575639 SAMD9LQ8IVG5 1584 aa23.2■■□□□ 1.3
TRAPPC1-207ENST00000575639 MYOM3Q5VTT5 1437 aa23.2■■□□□ 1.3
TRAPPC1-207ENST00000575639 YEATS2Q9ULM3 1422 aa23.2■■□□□ 1.3
TRAPPC1-207ENST00000575639 SPAG9O60271 1321 aaKnown RBP23.2■■□□□ 1.3
TRAPPC1-207ENST00000575639 ITSN2Q9NZM3 1697 aa23.19■■□□□ 1.3
TRAPPC1-207ENST00000575639 ZFYVE16Q7Z3T8 1539 aa23.19■■□□□ 1.3
TRAPPC1-207ENST00000575639 MIA2Q96PC5 1412 aa23.19■■□□□ 1.3
TRAPPC1-207ENST00000575639 SYCP2Q9BX26 1530 aa23.18■■□□□ 1.3
TRAPPC1-207ENST00000575639 LMTK3Q96Q04 1460 aa23.17■■□□□ 1.3
TRAPPC1-207ENST00000575639 MLH3Q9UHC1 1453 aa23.17■■□□□ 1.3
TRAPPC1-207ENST00000575639 KDM5CP41229 1560 aa23.16■■□□□ 1.3
TRAPPC1-207ENST00000575639 ATP10AO60312 1499 aa23.16■■□□□ 1.3
TRAPPC1-207ENST00000575639 ARHGEF40Q8TER5 1519 aa23.15■■□□□ 1.3
TRAPPC1-207ENST00000575639 CAMSAP2Q08AD1 1489 aa23.14■■□□□ 1.29
TRAPPC1-207ENST00000575639 MBD5Q9P267 1494 aa23.13■■□□□ 1.29
TRAPPC1-207ENST00000575639 TSPY4P0CV99 314 aa23.13■■□□□ 1.29
TRAPPC1-207ENST00000575639 TSPY10P0CW01 314 aa23.13■■□□□ 1.29
TRAPPC1-207ENST00000575639 C9orf84Q5VXU9 1444 aa23.11■■□□□ 1.29
TRAPPC1-207ENST00000575639 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
TRAPPC1-207ENST00000575639 CCDC141Q6ZP82 1450 aa23.07■■□□□ 1.28
TRAPPC1-207ENST00000575639 FGD6Q6ZV73 1430 aa23.07■■□□□ 1.28
TRAPPC1-207ENST00000575639 RTEL1-TNFRSF6BF6WH68 1400 aa23.06■■□□□ 1.28
TRAPPC1-207ENST00000575639 MLECQ14165 292 aa23.05■■□□□ 1.28
TRAPPC1-207ENST00000575639 FAM50AQ14320 339 aaKnown RBP23.02■■□□□ 1.28
TRAPPC1-207ENST00000575639 ATP7AQ04656 1500 aa23.02■■□□□ 1.28
TRAPPC1-207ENST00000575639 SOCS7O14512 581 aa23.01■■□□□ 1.27
TRAPPC1-207ENST00000575639 ARHGEF5Q12774 1597 aa23.01■■□□□ 1.27
TRAPPC1-207ENST00000575639 DIP2CQ9Y2E4 1556 aa23.01■■□□□ 1.27
TRAPPC1-207ENST00000575639 ILDR2Q71H61 639 aa22.99■■□□□ 1.27
TRAPPC1-207ENST00000575639 TCOF1Q13428 1488 aaKnown RBP22.98■■□□□ 1.27
TRAPPC1-207ENST00000575639 KIDINS220Q9ULH0 1771 aa22.97■■□□□ 1.27
TRAPPC1-207ENST00000575639 REREQ9P2R6 1566 aa22.97■■□□□ 1.27
TRAPPC1-207ENST00000575639 ABCA6Q8N139 1617 aa22.97■■□□□ 1.27
TRAPPC1-207ENST00000575639 PTPN23Q9H3S7 1636 aa22.97■■□□□ 1.27
TRAPPC1-207ENST00000575639 A2MP01023 1474 aa22.96■■□□□ 1.27
TRAPPC1-207ENST00000575639 ESF1Q9H501 851 aaKnown RBP22.95■■□□□ 1.26
TRAPPC1-207ENST00000575639 INO80Q9ULG1 1556 aaPredicted RBP22.95■■□□□ 1.26
TRAPPC1-207ENST00000575639 AGLP35573 1532 aa22.94■■□□□ 1.26
TRAPPC1-207ENST00000575639 DHX29Q7Z478 1369 aaKnown RBP22.94■■□□□ 1.26
TRAPPC1-207ENST00000575639 ABCC5O15440 1437 aa22.93■■□□□ 1.26
TRAPPC1-207ENST00000575639 PTPRMP28827 1452 aa22.92■■□□□ 1.26
TRAPPC1-207ENST00000575639 BCORL1Q5H9F3 1711 aa22.91■■□□□ 1.26
TRAPPC1-207ENST00000575639 DAPK1P53355 1430 aa22.91■■□□□ 1.26
TRAPPC1-207ENST00000575639 ADAMTSL3P82987 1691 aa22.88■■□□□ 1.25
TRAPPC1-207ENST00000575639 GGT6Q6P531 493 aa22.88■■□□□ 1.25
TRAPPC1-207ENST00000575639 CHIC2Q9UKJ5 165 aa22.88■■□□□ 1.25
TRAPPC1-207ENST00000575639 SHANK2Q9UPX8 1470 aa22.87■■□□□ 1.25
TRAPPC1-207ENST00000575639 KIF3BO15066 747 aa22.87■■□□□ 1.25
TRAPPC1-207ENST00000575639 PPP6R1Q9UPN7 881 aa22.87■■□□□ 1.25
TRAPPC1-207ENST00000575639 RRP7BPQ9NSQ0 103 aa22.86■■□□□ 1.25
TRAPPC1-207ENST00000575639 ANKRD30AQ9BXX3 1397 aa22.86■■□□□ 1.25
TRAPPC1-207ENST00000575639 MAST1Q9Y2H9 1570 aa22.85■■□□□ 1.25
TRAPPC1-207ENST00000575639 DISP3Q9P2K9 1392 aa22.85■■□□□ 1.25
TRAPPC1-207ENST00000575639 SIGLEC1Q9BZZ2 1709 aa22.85■■□□□ 1.25
TRAPPC1-207ENST00000575639 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.84■■□□□ 1.25
TRAPPC1-207ENST00000575639 PLPPR3Q6T4P5 718 aa22.83■■□□□ 1.25
TRAPPC1-207ENST00000575639 KIF15Q9NS87 1388 aa22.83■■□□□ 1.25
TRAPPC1-207ENST00000575639 PLXNC1O60486 1568 aa22.83■■□□□ 1.25
TRAPPC1-207ENST00000575639 MADDQ8WXG6 1647 aa22.82■■□□□ 1.24
TRAPPC1-207ENST00000575639 DNMT1P26358 1616 aaKnown RBP22.82■■□□□ 1.24
TRAPPC1-207ENST00000575639 ADGBQ8N7X0 1667 aa22.81■■□□□ 1.24
TRAPPC1-207ENST00000575639 CNTLNQ9NXG0 1405 aa22.81■■□□□ 1.24
TRAPPC1-207ENST00000575639 ITGAEP38570 1179 aa22.79■■□□□ 1.24
TRAPPC1-207ENST00000575639 NCOA1Q15788 1441 aa22.78■■□□□ 1.24
TRAPPC1-207ENST00000575639 CERKQ8TCT0 537 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms