RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 SUPT6HQ7KZ85 1726 aaKnown RBP23.87■■□□□ 1.41
LITAF-217ENST00000575426 PREX2Q70Z35 1606 aa23.86■■□□□ 1.41
LITAF-217ENST00000575426 CCNB3Q8WWL7 1395 aa23.83■■□□□ 1.41
LITAF-217ENST00000575426 LRRC9Q6ZRR7 1453 aa23.82■■□□□ 1.4
LITAF-217ENST00000575426 DENND4BO75064 1496 aaPredicted RBP23.8■■□□□ 1.4
LITAF-217ENST00000575426 ADGRL1O94910 1474 aa23.8■■□□□ 1.4
LITAF-217ENST00000575426 ITSN2Q9NZM3 1697 aa23.79■■□□□ 1.4
LITAF-217ENST00000575426 RAPGEF3O95398 923 aa23.78■■□□□ 1.4
LITAF-217ENST00000575426 GPATCH8Q9UKJ3 1502 aaKnown RBP23.78■■□□□ 1.4
LITAF-217ENST00000575426 KANK4Q5T7N3 995 aaPredicted RBP23.77■■□□□ 1.4
LITAF-217ENST00000575426 SCAPERQ9BY12 1400 aa23.76■■□□□ 1.39
LITAF-217ENST00000575426 RICTORQ6R327 1708 aa23.76■■□□□ 1.39
LITAF-217ENST00000575426 CFDP1Q9UEE9 299 aaPredicted RBP23.76■■□□□ 1.39
LITAF-217ENST00000575426 ZNF777Q9ULD5 760 aaPredicted RBP23.76■■□□□ 1.39
LITAF-217ENST00000575426 NCOA2Q15596 1464 aa23.75■■□□□ 1.39
LITAF-217ENST00000575426 FRMPD1Q5SYB0 1578 aa23.7■■□□□ 1.38
LITAF-217ENST00000575426 ABCC1P33527 1531 aa23.68■■□□□ 1.38
LITAF-217ENST00000575426 POGZQ7Z3K3 1410 aa23.67■■□□□ 1.38
LITAF-217ENST00000575426 SAMD9LQ8IVG5 1584 aa23.67■■□□□ 1.38
LITAF-217ENST00000575426 PLEKHH2Q8IVE3 1493 aa23.67■■□□□ 1.38
LITAF-217ENST00000575426 ZNF518AQ6AHZ1 1483 aa23.65■■□□□ 1.38
LITAF-217ENST00000575426 MYT1LQ9UL68 1186 aa23.65■■□□□ 1.38
LITAF-217ENST00000575426 ZMYM4Q5VZL5 1548 aa23.63■■□□□ 1.37
LITAF-217ENST00000575426 AFAP1Q8N556 730 aa23.62■■□□□ 1.37
LITAF-217ENST00000575426 SYCP2Q9BX26 1530 aa23.61■■□□□ 1.37
LITAF-217ENST00000575426 HNRNPMP52272 730 aaKnown RBP eCLIP23.61■■□□□ 1.37
LITAF-217ENST00000575426 MAGI2Q86UL8 1455 aa23.61■■□□□ 1.37
LITAF-217ENST00000575426 KIAA1107Q9UPP5 1409 aa23.6■■□□□ 1.37
LITAF-217ENST00000575426 ARHGEF12Q9NZN5 1544 aa23.6■■□□□ 1.37
LITAF-217ENST00000575426 ZFYVE16Q7Z3T8 1539 aa23.59■■□□□ 1.37
LITAF-217ENST00000575426 MYOM3Q5VTT5 1437 aa23.59■■□□□ 1.37
LITAF-217ENST00000575426 TRAPPC8Q9Y2L5 1435 aa23.59■■□□□ 1.37
LITAF-217ENST00000575426 ZNF644Q9H582 1327 aaPredicted RBP23.58■■□□□ 1.36
LITAF-217ENST00000575426 KDM5CP41229 1560 aa23.57■■□□□ 1.36
LITAF-217ENST00000575426 ARHGEF40Q8TER5 1519 aa23.56■■□□□ 1.36
LITAF-217ENST00000575426 HECW2Q9P2P5 1572 aa23.56■■□□□ 1.36
LITAF-217ENST00000575426 CAMSAP2Q08AD1 1489 aa23.56■■□□□ 1.36
LITAF-217ENST00000575426 MIA2Q96PC5 1412 aa23.55■■□□□ 1.36
LITAF-217ENST00000575426 YEATS2Q9ULM3 1422 aa23.52■■□□□ 1.36
LITAF-217ENST00000575426 RSPH4AQ5TD94 716 aa23.52■■□□□ 1.36
LITAF-217ENST00000575426 MLH3Q9UHC1 1453 aa23.51■■□□□ 1.35
LITAF-217ENST00000575426 SPAG9O60271 1321 aaKnown RBP23.51■■□□□ 1.35
LITAF-217ENST00000575426 ARID4BQ4LE39 1312 aaPredicted RBP23.51■■□□□ 1.35
LITAF-217ENST00000575426 PPARGC1BQ86YN6 1023 aaKnown RBP23.49■■□□□ 1.35
LITAF-217ENST00000575426 KIDINS220Q9ULH0 1771 aa23.49■■□□□ 1.35
LITAF-217ENST00000575426 ATP10AO60312 1499 aa23.49■■□□□ 1.35
LITAF-217ENST00000575426 PTPN23Q9H3S7 1636 aa23.48■■□□□ 1.35
LITAF-217ENST00000575426 MBD5Q9P267 1494 aa23.48■■□□□ 1.35
LITAF-217ENST00000575426 CCDC141Q6ZP82 1450 aa23.46■■□□□ 1.35
LITAF-217ENST00000575426 ARHGEF5Q12774 1597 aa23.45■■□□□ 1.34
LITAF-217ENST00000575426 C9orf84Q5VXU9 1444 aa23.45■■□□□ 1.34
LITAF-217ENST00000575426 FGD6Q6ZV73 1430 aa23.45■■□□□ 1.34
LITAF-217ENST00000575426 TSPY4P0CV99 314 aa23.45■■□□□ 1.34
LITAF-217ENST00000575426 TSPY10P0CW01 314 aa23.45■■□□□ 1.34
LITAF-217ENST00000575426 ABCA6Q8N139 1617 aa23.44■■□□□ 1.34
LITAF-217ENST00000575426 DIP2CQ9Y2E4 1556 aa23.44■■□□□ 1.34
LITAF-217ENST00000575426 ATP7AQ04656 1500 aa23.43■■□□□ 1.34
LITAF-217ENST00000575426 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
LITAF-217ENST00000575426 INO80Q9ULG1 1556 aaPredicted RBP23.42■■□□□ 1.34
LITAF-217ENST00000575426 KDM4FA0A1W2PPD8 638 aa23.41■■□□□ 1.34
LITAF-217ENST00000575426 BCORL1Q5H9F3 1711 aa23.39■■□□□ 1.34
LITAF-217ENST00000575426 RTEL1-TNFRSF6BF6WH68 1400 aa23.39■■□□□ 1.33
LITAF-217ENST00000575426 ADGBQ8N7X0 1667 aa23.38■■□□□ 1.33
LITAF-217ENST00000575426 TCOF1Q13428 1488 aaKnown RBP23.38■■□□□ 1.33
LITAF-217ENST00000575426 REREQ9P2R6 1566 aa23.38■■□□□ 1.33
LITAF-217ENST00000575426 SIGLEC1Q9BZZ2 1709 aa23.37■■□□□ 1.33
LITAF-217ENST00000575426 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
LITAF-217ENST00000575426 MLECQ14165 292 aa23.35■■□□□ 1.33
LITAF-217ENST00000575426 CROCC2H7BZ55 1655 aa23.33■■□□□ 1.33
LITAF-217ENST00000575426 ADAMTSL3P82987 1691 aa23.33■■□□□ 1.33
LITAF-217ENST00000575426 DNMT1P26358 1616 aaKnown RBP23.33■■□□□ 1.32
LITAF-217ENST00000575426 MAST1Q9Y2H9 1570 aa23.32■■□□□ 1.32
LITAF-217ENST00000575426 A2MP01023 1474 aa23.31■■□□□ 1.32
LITAF-217ENST00000575426 AGLP35573 1532 aa23.3■■□□□ 1.32
LITAF-217ENST00000575426 DAPK1P53355 1430 aa23.29■■□□□ 1.32
LITAF-217ENST00000575426 ABCC5O15440 1437 aa23.28■■□□□ 1.32
LITAF-217ENST00000575426 FER1L4A9Z1Z3 1794 aa23.28■■□□□ 1.32
LITAF-217ENST00000575426 MADDQ8WXG6 1647 aa23.27■■□□□ 1.32
LITAF-217ENST00000575426 SHANK2Q9UPX8 1470 aa23.26■■□□□ 1.31
LITAF-217ENST00000575426 RIMS1Q86UR5 1692 aaKnown RBP23.25■■□□□ 1.31
LITAF-217ENST00000575426 DHX29Q7Z478 1369 aaKnown RBP23.25■■□□□ 1.31
LITAF-217ENST00000575426 PLXNC1O60486 1568 aa23.24■■□□□ 1.31
LITAF-217ENST00000575426 ESF1Q9H501 851 aaKnown RBP23.24■■□□□ 1.31
LITAF-217ENST00000575426 CHIC2Q9UKJ5 165 aa23.23■■□□□ 1.31
LITAF-217ENST00000575426 ANKRD30AQ9BXX3 1397 aa23.2■■□□□ 1.3
LITAF-217ENST00000575426 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.2■■□□□ 1.3
LITAF-217ENST00000575426 RRP7BPQ9NSQ0 103 aa23.19■■□□□ 1.3
LITAF-217ENST00000575426 KIF3BO15066 747 aa23.18■■□□□ 1.3
LITAF-217ENST00000575426 GGT6Q6P531 493 aa23.18■■□□□ 1.3
LITAF-217ENST00000575426 PTPRMP28827 1452 aa23.17■■□□□ 1.3
LITAF-217ENST00000575426 DUOX2Q9NRD8 1548 aa23.17■■□□□ 1.3
LITAF-217ENST00000575426 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
LITAF-217ENST00000575426 ITGAEP38570 1179 aa23.16■■□□□ 1.3
LITAF-217ENST00000575426 KIF15Q9NS87 1388 aa23.15■■□□□ 1.3
LITAF-217ENST00000575426 PLPPR3Q6T4P5 718 aa23.14■■□□□ 1.29
LITAF-217ENST00000575426 EIF2AK4Q9P2K8 1649 aaKnown RBP23.13■■□□□ 1.29
LITAF-217ENST00000575426 PPP6R1Q9UPN7 881 aa23.13■■□□□ 1.29
LITAF-217ENST00000575426 ADGRL2O95490 1459 aa23.12■■□□□ 1.29
LITAF-217ENST00000575426 NCOA1Q15788 1441 aa23.11■■□□□ 1.29
LITAF-217ENST00000575426 CNTLNQ9NXG0 1405 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms