RNA–Protein interactions for RNA: ENST00000574318.1

TOM1L1-217, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-217ENST00000574318 COLQQ9Y215 455 aaPredicted RBP11.9□□□□□ -0.5
TOM1L1-217ENST00000574318 KDM2AQ9Y2K7 1162 aa11.9□□□□□ -0.5
TOM1L1-217ENST00000574318 POTEFA5A3E0 1075 aa11.89□□□□□ -0.51
TOM1L1-217ENST00000574318 PPP1R37O75864 691 aa11.87□□□□□ -0.51
TOM1L1-217ENST00000574318 DPY19L2Q6NUT2 758 aa11.83□□□□□ -0.52
TOM1L1-217ENST00000574318 L3MBTL3Q96JM7 780 aaPredicted RBP11.82□□□□□ -0.52
TOM1L1-217ENST00000574318 TMEM121BQ9BXQ6 578 aaPredicted RBP11.81□□□□□ -0.52
TOM1L1-217ENST00000574318 MICALL2Q8IY33 904 aa11.8□□□□□ -0.52
TOM1L1-217ENST00000574318 BOLA1Q9Y3E2 137 aa11.8□□□□□ -0.52
TOM1L1-217ENST00000574318 G3V3G9 751 aa11.77□□□□□ -0.53
TOM1L1-217ENST00000574318 BCANQ96GW7 911 aa11.74□□□□□ -0.53
TOM1L1-217ENST00000574318 CADPS2Q86UW7 1296 aa11.73□□□□□ -0.53
TOM1L1-217ENST00000574318 NCAPD3P42695 1498 aa11.71□□□□□ -0.53
TOM1L1-217ENST00000574318 POTEB2H3BUK9 544 aa11.68□□□□□ -0.54
TOM1L1-217ENST00000574318 C3orf67Q6ZVT6 689 aa11.68□□□□□ -0.54
TOM1L1-217ENST00000574318 CRISPLD2Q9H0B8 497 aa11.68□□□□□ -0.54
TOM1L1-217ENST00000574318 ATAD2BQ9ULI0 1458 aa11.68□□□□□ -0.54
TOM1L1-217ENST00000574318 NCKAP5LQ9HCH0 1330 aa11.66□□□□□ -0.54
TOM1L1-217ENST00000574318 POTEJP0CG39 1038 aa11.66□□□□□ -0.54
TOM1L1-217ENST00000574318 PDE4AP27815 886 aa11.64□□□□□ -0.55
TOM1L1-217ENST00000574318 MAMSTRQ6ZN01 415 aa11.64□□□□□ -0.55
TOM1L1-217ENST00000574318 GPHNQ9NQX3 736 aaPredicted RBP11.63□□□□□ -0.55
TOM1L1-217ENST00000574318 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.63□□□□□ -0.55
TOM1L1-217ENST00000574318 SMARCA4P51532 1647 aa11.62□□□□□ -0.55
TOM1L1-217ENST00000574318 KIF3CO14782 793 aa11.62□□□□□ -0.55
TOM1L1-217ENST00000574318 MFSD10Q14728 455 aa11.62□□□□□ -0.55
TOM1L1-217ENST00000574318 TMC2Q8TDI7 906 aa11.61□□□□□ -0.55
TOM1L1-217ENST00000574318 TMEM92Q6UXU6 159 aa11.6□□□□□ -0.55
TOM1L1-217ENST00000574318 SCUBE2Q9NQ36 999 aa11.6□□□□□ -0.55
TOM1L1-217ENST00000574318 WDR70Q9NW82 654 aa11.6□□□□□ -0.55
TOM1L1-217ENST00000574318 SMARCA2P51531 1590 aa11.59□□□□□ -0.55
TOM1L1-217ENST00000574318 P3H3Q8IVL6 736 aa11.59□□□□□ -0.55
TOM1L1-217ENST00000574318 DDX27Q96GQ7 796 aaKnown RBP11.58□□□□□ -0.56
TOM1L1-217ENST00000574318 LARP6Q9BRS8 491 aaKnown RBP11.58□□□□□ -0.56
TOM1L1-217ENST00000574318 HMGXB3Q12766 1538 aa11.58□□□□□ -0.56
TOM1L1-217ENST00000574318 C2orf72A6NCS6 295 aa11.57□□□□□ -0.56
TOM1L1-217ENST00000574318 LHX8Q68G74 356 aa11.57□□□□□ -0.56
TOM1L1-217ENST00000574318 BAZ1AQ9NRL2 1556 aaPredicted RBP11.57□□□□□ -0.56
TOM1L1-217ENST00000574318 FOXK1P85037 733 aa11.56□□□□□ -0.56
TOM1L1-217ENST00000574318 PPP1R15BQ5SWA1 713 aa11.54□□□□□ -0.56
TOM1L1-217ENST00000574318 BAZ1BQ9UIG0 1483 aaKnown RBP11.53□□□□□ -0.56
TOM1L1-217ENST00000574318 DSG2Q14126 1118 aa11.53□□□□□ -0.56
TOM1L1-217ENST00000574318 NBR1Q14596 966 aa11.53□□□□□ -0.56
TOM1L1-217ENST00000574318 MROH2BQ7Z745 1585 aa11.53□□□□□ -0.56
TOM1L1-217ENST00000574318 PEG3Q9GZU2 1588 aa11.53□□□□□ -0.56
TOM1L1-217ENST00000574318 ERCC6Q03468 1493 aa11.51□□□□□ -0.57
TOM1L1-217ENST00000574318 NESP48681 1621 aa11.5□□□□□ -0.57
TOM1L1-217ENST00000574318 OTUD5Q96G74 571 aa11.5□□□□□ -0.57
TOM1L1-217ENST00000574318 CUX2O14529 1486 aa11.5□□□□□ -0.57
TOM1L1-217ENST00000574318 CAMK2BQ13554 666 aa11.49□□□□□ -0.57
TOM1L1-217ENST00000574318 SLAIN1Q8ND83 568 aa11.49□□□□□ -0.57
TOM1L1-217ENST00000574318 PLPP6Q8IY26 295 aa11.48□□□□□ -0.57
TOM1L1-217ENST00000574318 E2F4Q16254 413 aa11.47□□□□□ -0.57
TOM1L1-217ENST00000574318 KCNV2Q8TDN2 545 aa11.47□□□□□ -0.57
TOM1L1-217ENST00000574318 ARHGEF1Q92888 912 aaKnown RBP11.42□□□□□ -0.58
TOM1L1-217ENST00000574318 ARIH1Q9Y4X5 557 aaPredicted RBP11.42□□□□□ -0.58
TOM1L1-217ENST00000574318 SLC34A2O95436 690 aa11.41□□□□□ -0.58
TOM1L1-217ENST00000574318 EMILIN3Q9NT22 766 aa11.38□□□□□ -0.59
TOM1L1-217ENST00000574318 DOK7Q18PE1 504 aa11.37□□□□□ -0.59
TOM1L1-217ENST00000574318 PTCD2Q8WV60 388 aaKnown RBP11.37□□□□□ -0.59
TOM1L1-217ENST00000574318 LAMC3Q9Y6N6 1575 aa11.37□□□□□ -0.59
TOM1L1-217ENST00000574318 SNPHO15079 494 aa11.36□□□□□ -0.59
TOM1L1-217ENST00000574318 HOXB3P14651 431 aaPredicted RBP11.36□□□□□ -0.59
TOM1L1-217ENST00000574318 OXER1Q8TDS5 423 aa11.36□□□□□ -0.59
TOM1L1-217ENST00000574318 CADPSQ9ULU8 1353 aa11.36□□□□□ -0.59
TOM1L1-217ENST00000574318 PDS5BQ9NTI5 1447 aa11.35□□□□□ -0.59
TOM1L1-217ENST00000574318 WIZO95785 1651 aa11.33□□□□□ -0.6
TOM1L1-217ENST00000574318 THOC2Q8NI27 1593 aaKnown RBP11.33□□□□□ -0.6
TOM1L1-217ENST00000574318 ZSWIM6Q9HCJ5 1215 aa11.33□□□□□ -0.6
TOM1L1-217ENST00000574318 RSF1Q96T23 1441 aaPredicted RBP11.33□□□□□ -0.6
TOM1L1-217ENST00000574318 RIMBP2O15034 1052 aa11.32□□□□□ -0.6
TOM1L1-217ENST00000574318 DPYSL4O14531 572 aa11.3□□□□□ -0.6
TOM1L1-217ENST00000574318 TBC1D12O60347 775 aa11.3□□□□□ -0.6
TOM1L1-217ENST00000574318 PDIA6Q15084 440 aa11.29□□□□□ -0.6
TOM1L1-217ENST00000574318 UPF1Q92900 1129 aaKnown RBP eCLIP11.29□□□□□ -0.6
TOM1L1-217ENST00000574318 PCDHGA4Q9Y5G9 962 aa11.28□□□□□ -0.6
TOM1L1-217ENST00000574318 SPDYE16A6NNV3 312 aaPredicted RBP11.27□□□□□ -0.61
TOM1L1-217ENST00000574318 MAP3K9P80192 1104 aa11.27□□□□□ -0.61
TOM1L1-217ENST00000574318 ZNF710Q8N1W2 664 aa11.26□□□□□ -0.61
TOM1L1-217ENST00000574318 KIF21AQ7Z4S6 1674 aa11.25□□□□□ -0.61
TOM1L1-217ENST00000574318 TPRNQ4KMQ1 711 aa11.25□□□□□ -0.61
TOM1L1-217ENST00000574318 MRC2Q9UBG0 1479 aa11.25□□□□□ -0.61
TOM1L1-217ENST00000574318 ZNF316A6NFI3 1004 aaPredicted RBP11.24□□□□□ -0.61
TOM1L1-217ENST00000574318 TULP1O00294 542 aaPredicted RBP11.24□□□□□ -0.61
TOM1L1-217ENST00000574318 GPR153Q6NV75 609 aa11.24□□□□□ -0.61
TOM1L1-217ENST00000574318 TESPA1A2RU30 521 aaPredicted RBP11.23□□□□□ -0.61
TOM1L1-217ENST00000574318 CFTRP13569 1480 aa11.23□□□□□ -0.61
TOM1L1-217ENST00000574318 KDM4FA0A1W2PPD8 638 aa11.22□□□□□ -0.61
TOM1L1-217ENST00000574318 TOP2AP11388 1531 aaKnown RBP11.22□□□□□ -0.61
TOM1L1-217ENST00000574318 WDR62O43379 1518 aa11.21□□□□□ -0.61
TOM1L1-217ENST00000574318 EVI5O60447 810 aa11.21□□□□□ -0.61
TOM1L1-217ENST00000574318 HOXB1P14653 301 aaPredicted RBP11.21□□□□□ -0.61
TOM1L1-217ENST00000574318 FANCD2Q9BXW9 1451 aa11.2□□□□□ -0.62
TOM1L1-217ENST00000574318 SEMA3EO15041 775 aa11.2□□□□□ -0.62
TOM1L1-217ENST00000574318 PRKCSHP14314 528 aaPredicted RBP11.2□□□□□ -0.62
TOM1L1-217ENST00000574318 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
TOM1L1-217ENST00000574318 CEP164Q9UPV0 1460 aa11.19□□□□□ -0.62
TOM1L1-217ENST00000574318 ARSIQ5FYB1 569 aa11.19□□□□□ -0.62
TOM1L1-217ENST00000574318 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.19□□□□□ -0.62
TOM1L1-217ENST00000574318 PTGER2P43116 358 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms