RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 ARHGAP5Q13017 1502 aa18.3■□□□□ 0.52
RPAIN-214ENST00000574003 ARHGEF40Q8TER5 1519 aa18.3■□□□□ 0.52
RPAIN-214ENST00000574003 POGZQ7Z3K3 1410 aa18.29■□□□□ 0.52
RPAIN-214ENST00000574003 CEP162Q5TB80 1403 aa18.28■□□□□ 0.52
RPAIN-214ENST00000574003 ZMYM4Q5VZL5 1548 aa18.28■□□□□ 0.52
RPAIN-214ENST00000574003 SIGLEC1Q9BZZ2 1709 aa18.27■□□□□ 0.52
RPAIN-214ENST00000574003 CDC42BPBQ9Y5S2 1711 aa18.27■□□□□ 0.52
RPAIN-214ENST00000574003 ADAMTSL3P82987 1691 aa18.27■□□□□ 0.52
RPAIN-214ENST00000574003 ZFYVE16Q7Z3T8 1539 aa18.27■□□□□ 0.51
RPAIN-214ENST00000574003 AFAP1Q8N556 730 aa18.25■□□□□ 0.51
RPAIN-214ENST00000574003 BCORL1Q5H9F3 1711 aa18.25■□□□□ 0.51
RPAIN-214ENST00000574003 MADDQ8WXG6 1647 aa18.23■□□□□ 0.51
RPAIN-214ENST00000574003 HECW2Q9P2P5 1572 aa18.22■□□□□ 0.51
RPAIN-214ENST00000574003 MLECQ14165 292 aa18.22■□□□□ 0.51
RPAIN-214ENST00000574003 PREX2Q70Z35 1606 aa18.22■□□□□ 0.51
RPAIN-214ENST00000574003 ARHGEF12Q9NZN5 1544 aa18.22■□□□□ 0.51
RPAIN-214ENST00000574003 PTPRMP28827 1452 aa18.21■□□□□ 0.51
RPAIN-214ENST00000574003 CDC42BPAQ5VT25 1732 aa18.21■□□□□ 0.51
RPAIN-214ENST00000574003 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
RPAIN-214ENST00000574003 ZNF777Q9ULD5 760 aaPredicted RBP18.2■□□□□ 0.5
RPAIN-214ENST00000574003 MAGI2Q86UL8 1455 aa18.2■□□□□ 0.5
RPAIN-214ENST00000574003 MYT1LQ9UL68 1186 aa18.19■□□□□ 0.5
RPAIN-214ENST00000574003 TRAPPC8Q9Y2L5 1435 aa18.19■□□□□ 0.5
RPAIN-214ENST00000574003 RIMS1Q86UR5 1692 aaKnown RBP18.18■□□□□ 0.5
RPAIN-214ENST00000574003 ZNF518AQ6AHZ1 1483 aa18.17■□□□□ 0.5
RPAIN-214ENST00000574003 ABCC1P33527 1531 aa18.17■□□□□ 0.5
RPAIN-214ENST00000574003 GPATCH8Q9UKJ3 1502 aaKnown RBP18.17■□□□□ 0.5
RPAIN-214ENST00000574003 MTUS2Q5JR59 1369 aa18.17■□□□□ 0.5
RPAIN-214ENST00000574003 ATP10AO60312 1499 aa18.16■□□□□ 0.5
RPAIN-214ENST00000574003 KDM5CP41229 1560 aa18.16■□□□□ 0.5
RPAIN-214ENST00000574003 ITSN2Q9NZM3 1697 aa18.15■□□□□ 0.5
RPAIN-214ENST00000574003 C9orf84Q5VXU9 1444 aa18.14■□□□□ 0.49
RPAIN-214ENST00000574003 SAMD9LQ8IVG5 1584 aa18.13■□□□□ 0.49
RPAIN-214ENST00000574003 HNRNPMP52272 730 aaKnown RBP eCLIP18.13■□□□□ 0.49
RPAIN-214ENST00000574003 CCNB3Q8WWL7 1395 aa18.11■□□□□ 0.49
RPAIN-214ENST00000574003 DIP2CQ9Y2E4 1556 aa18.11■□□□□ 0.49
RPAIN-214ENST00000574003 ABCA6Q8N139 1617 aa18.11■□□□□ 0.49
RPAIN-214ENST00000574003 SYCP2Q9BX26 1530 aa18.1■□□□□ 0.49
RPAIN-214ENST00000574003 CFDP1Q9UEE9 299 aaPredicted RBP18.1■□□□□ 0.49
RPAIN-214ENST00000574003 ZNF644Q9H582 1327 aaPredicted RBP18.09■□□□□ 0.49
RPAIN-214ENST00000574003 EHBP1L1Q8N3D4 1523 aa18.08■□□□□ 0.49
RPAIN-214ENST00000574003 MLH3Q9UHC1 1453 aa18.08■□□□□ 0.49
RPAIN-214ENST00000574003 TIAM1Q13009 1591 aa18.08■□□□□ 0.48
RPAIN-214ENST00000574003 FER1L4A9Z1Z3 1794 aa18.07■□□□□ 0.48
RPAIN-214ENST00000574003 KIDINS220Q9ULH0 1771 aa18.07■□□□□ 0.48
RPAIN-214ENST00000574003 CEBPAP49715 358 aaPredicted RBP18.05■□□□□ 0.48
RPAIN-214ENST00000574003 VPS8Q8N3P4 1428 aa18.05■□□□□ 0.48
RPAIN-214ENST00000574003 SPAG9O60271 1321 aaKnown RBP18.03■□□□□ 0.48
RPAIN-214ENST00000574003 HSPA2P54652 639 aa18.02■□□□□ 0.48
RPAIN-214ENST00000574003 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
RPAIN-214ENST00000574003 LMTK3Q96Q04 1460 aa18.01■□□□□ 0.47
RPAIN-214ENST00000574003 KIAA1107Q9UPP5 1409 aa18■□□□□ 0.47
RPAIN-214ENST00000574003 REREQ9P2R6 1566 aa18■□□□□ 0.47
RPAIN-214ENST00000574003 KANK4Q5T7N3 995 aaPredicted RBP17.99■□□□□ 0.47
RPAIN-214ENST00000574003 PLEKHH2Q8IVE3 1493 aa17.99■□□□□ 0.47
RPAIN-214ENST00000574003 SUPT6HQ7KZ85 1726 aaKnown RBP17.98■□□□□ 0.47
RPAIN-214ENST00000574003 ATP7AQ04656 1500 aa17.98■□□□□ 0.47
RPAIN-214ENST00000574003 LRRC9Q6ZRR7 1453 aa17.96■□□□□ 0.47
RPAIN-214ENST00000574003 MBD5Q9P267 1494 aa17.96■□□□□ 0.47
RPAIN-214ENST00000574003 AGLP35573 1532 aa17.96■□□□□ 0.47
RPAIN-214ENST00000574003 INO80Q9ULG1 1556 aaPredicted RBP17.95■□□□□ 0.46
RPAIN-214ENST00000574003 CAMSAP2Q08AD1 1489 aa17.93■□□□□ 0.46
RPAIN-214ENST00000574003 A2MP01023 1474 aa17.91■□□□□ 0.46
RPAIN-214ENST00000574003 C3P01024 1663 aa17.9■□□□□ 0.46
RPAIN-214ENST00000574003 ILDR1Q86SU0 546 aaPredicted RBP17.9■□□□□ 0.46
RPAIN-214ENST00000574003 ESF1Q9H501 851 aaKnown RBP17.9■□□□□ 0.46
RPAIN-214ENST00000574003 PLXNC1O60486 1568 aa17.88■□□□□ 0.45
RPAIN-214ENST00000574003 GGT6Q6P531 493 aa17.88■□□□□ 0.45
RPAIN-214ENST00000574003 CCDC141Q6ZP82 1450 aa17.87■□□□□ 0.45
RPAIN-214ENST00000574003 MAP3K1Q13233 1512 aa17.87■□□□□ 0.45
RPAIN-214ENST00000574003 PREX1Q8TCU6 1659 aa17.85■□□□□ 0.45
RPAIN-214ENST00000574003 ADGBQ8N7X0 1667 aa17.84■□□□□ 0.45
RPAIN-214ENST00000574003 RTEL1-TNFRSF6BF6WH68 1400 aa17.83■□□□□ 0.45
RPAIN-214ENST00000574003 SETD1BQ9UPS6 1966 aaKnown RBP17.83■□□□□ 0.44
RPAIN-214ENST00000574003 CLTCQ00610 1675 aaKnown RBP17.83■□□□□ 0.44
RPAIN-214ENST00000574003 ZMYM3Q14202 1370 aa17.82■□□□□ 0.44
RPAIN-214ENST00000574003 MYOM3Q5VTT5 1437 aa17.81■□□□□ 0.44
RPAIN-214ENST00000574003 UHRF1BP1Q6BDS2 1440 aa17.81■□□□□ 0.44
RPAIN-214ENST00000574003 CNTLNQ9NXG0 1405 aa17.81■□□□□ 0.44
RPAIN-214ENST00000574003 DHX29Q7Z478 1369 aaKnown RBP17.81■□□□□ 0.44
RPAIN-214ENST00000574003 APLP2Q06481 763 aa17.81■□□□□ 0.44
RPAIN-214ENST00000574003 ARHGEF5Q12774 1597 aa17.81■□□□□ 0.44
RPAIN-214ENST00000574003 KIF3BO15066 747 aa17.8■□□□□ 0.44
RPAIN-214ENST00000574003 TSPY4P0CV99 314 aa17.78■□□□□ 0.44
RPAIN-214ENST00000574003 TSPY10P0CW01 314 aa17.78■□□□□ 0.44
RPAIN-214ENST00000574003 RSPH4AQ5TD94 716 aa17.78■□□□□ 0.44
RPAIN-214ENST00000574003 MROH2AA6NES4 1674 aa17.77■□□□□ 0.44
RPAIN-214ENST00000574003 MIA2Q96PC5 1412 aa17.76■□□□□ 0.43
RPAIN-214ENST00000574003 STRCQ7RTU9 1775 aa17.76■□□□□ 0.43
RPAIN-214ENST00000574003 PTPRKQ15262 1439 aa17.73■□□□□ 0.43
RPAIN-214ENST00000574003 PTPN23Q9H3S7 1636 aa17.72■□□□□ 0.43
RPAIN-214ENST00000574003 NPATQ14207 1427 aa17.72■□□□□ 0.43
RPAIN-214ENST00000574003 MAST1Q9Y2H9 1570 aa17.71■□□□□ 0.43
RPAIN-214ENST00000574003 FBXO31Q5XUX0 539 aaPredicted RBP17.71■□□□□ 0.43
RPAIN-214ENST00000574003 ABCC5O15440 1437 aa17.71■□□□□ 0.43
RPAIN-214ENST00000574003 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
RPAIN-214ENST00000574003 FGD6Q6ZV73 1430 aa17.69■□□□□ 0.42
RPAIN-214ENST00000574003 MYO3AQ8NEV4 1616 aa17.68■□□□□ 0.42
RPAIN-214ENST00000574003 WASHC2CQ9Y4E1 1318 aa17.68■□□□□ 0.42
RPAIN-214ENST00000574003 NCOA1Q15788 1441 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms