RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 MARCH6O60337 910 aa20.14■□□□□ 0.81
CACNA1A-202ENST00000573710 MSH5O43196 834 aa20.14■□□□□ 0.81
CACNA1A-202ENST00000573710 CCAR2Q8N163 923 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-202ENST00000573710 SETQ01105 290 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-202ENST00000573710 MCCP23508 829 aa20.13■□□□□ 0.81
CACNA1A-202ENST00000573710 GORABQ5T7V8 394 aa20.13■□□□□ 0.81
CACNA1A-202ENST00000573710 NUDCQ9Y266 331 aa20.12■□□□□ 0.81
CACNA1A-202ENST00000573710 FRAT2O75474 233 aaPredicted RBP20.11■□□□□ 0.81
CACNA1A-202ENST00000573710 APPP05067 770 aa20.11■□□□□ 0.81
CACNA1A-202ENST00000573710 SUPT16HQ9Y5B9 1047 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-202ENST00000573710 KIAA1211Q6ZU35 1233 aa20.1■□□□□ 0.81
CACNA1A-202ENST00000573710 VSIG10Q8N0Z9 540 aa20.08■□□□□ 0.81
CACNA1A-202ENST00000573710 RTF1Q92541 710 aaKnown RBP20.08■□□□□ 0.81
CACNA1A-202ENST00000573710 RRP12Q5JTH9 1297 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-202ENST00000573710 NOL8Q76FK4 1167 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-202ENST00000573710 BCL11BQ9C0K0 894 aaPredicted RBP20.07■□□□□ 0.8
CACNA1A-202ENST00000573710 TOMM22Q9NS69 142 aa20.07■□□□□ 0.8
CACNA1A-202ENST00000573710 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.06■□□□□ 0.87e-11■■■■■ 260.8
CACNA1A-202ENST00000573710 B4GALNT3Q6L9W6 998 aa20.06■□□□□ 0.8
CACNA1A-202ENST00000573710 PHF23Q9BUL5 403 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-202ENST00000573710 FOXD4L5Q5VV16 416 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-202ENST00000573710 FOXD4L4Q8WXT5 416 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-202ENST00000573710 SAMD1Q6SPF0 538 aaPredicted RBP20.03■□□□□ 0.8
CACNA1A-202ENST00000573710 TCEAL9Q9UHQ7 104 aa20.03■□□□□ 0.8
CACNA1A-202ENST00000573710 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.02■□□□□ 0.8
CACNA1A-202ENST00000573710 SRPK2P78362 688 aaKnown RBP20.02■□□□□ 0.8
CACNA1A-202ENST00000573710 CWC22Q9HCG8 908 aaKnown RBP20.01■□□□□ 0.79
CACNA1A-202ENST00000573710 FOXD4L1Q9NU39 408 aa20.01■□□□□ 0.79
CACNA1A-202ENST00000573710 TPM4P67936 248 aa20.01■□□□□ 0.79
CACNA1A-202ENST00000573710 GTF2E1P29083 439 aaPredicted RBP20■□□□□ 0.79
CACNA1A-202ENST00000573710 STK26Q9P289 416 aa20■□□□□ 0.79
CACNA1A-202ENST00000573710 NOP58Q9Y2X3 529 aaKnown RBP20■□□□□ 0.79
CACNA1A-202ENST00000573710 MTUS2Q5JR59 1369 aa19.98■□□□□ 0.79
CACNA1A-202ENST00000573710 TPD52L1Q16890 204 aaPredicted RBP19.98■□□□□ 0.79
CACNA1A-202ENST00000573710 DHX37Q8IY37 1157 aaKnown RBP19.97■□□□□ 0.79
CACNA1A-202ENST00000573710 MIER1Q8N108 512 aa19.96■□□□□ 0.79
CACNA1A-202ENST00000573710 FBXW7Q969H0 707 aa19.96■□□□□ 0.79
CACNA1A-202ENST00000573710 TPM3P06753 285 aa19.96■□□□□ 0.79
CACNA1A-202ENST00000573710 AK7Q96M32 723 aa19.96■□□□□ 0.79
CACNA1A-202ENST00000573710 CARD11Q9BXL7 1154 aa19.96■□□□□ 0.79
CACNA1A-202ENST00000573710 TRIM6-TRIM34B2RNG4 842 aa19.95■□□□□ 0.78
CACNA1A-202ENST00000573710 CTDP1Q9Y5B0 961 aaPredicted RBP19.95■□□□□ 0.78
CACNA1A-202ENST00000573710 FOXD4L6Q3SYB3 417 aaPredicted RBP19.94■□□□□ 0.78
CACNA1A-202ENST00000573710 FOXD4L3Q6VB84 417 aaPredicted RBP19.94■□□□□ 0.78
CACNA1A-202ENST00000573710 CSRNP3Q8WYN3 585 aa19.93■□□□□ 0.78
CACNA1A-202ENST00000573710 DEKP35659 375 aaKnown RBP19.91■□□□□ 0.78
CACNA1A-202ENST00000573710 PLCD4Q9BRC7 762 aa19.91■□□□□ 0.78
CACNA1A-202ENST00000573710 CDCA8Q53HL2 280 aa19.9■□□□□ 0.78
CACNA1A-202ENST00000573710 SCRIBQ14160 1630 aa19.9■□□□□ 0.78
CACNA1A-202ENST00000573710 SLKQ9H2G2 1235 aaPredicted RBP19.89■□□□□ 0.78
CACNA1A-202ENST00000573710 CHMP4BQ9H444 224 aaKnown RBP19.89■□□□□ 0.77
CACNA1A-202ENST00000573710 SKIDA1Q1XH10 827 aa19.89■□□□□ 0.77
CACNA1A-202ENST00000573710 TRIM34Q9BYJ4 488 aa19.88■□□□□ 0.77
CACNA1A-202ENST00000573710 PCMTD1Q96MG8 357 aaPredicted RBP19.88■□□□□ 0.77
CACNA1A-202ENST00000573710 PAF1Q8N7H5 531 aa19.87■□□□□ 0.77
CACNA1A-202ENST00000573710 ZNF592Q92610 1267 aa19.84■□□□□ 0.77
CACNA1A-202ENST00000573710 TSR1Q2NL82 804 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-202ENST00000573710 SLC4A10Q6U841 1118 aa19.83■□□□□ 0.76
CACNA1A-202ENST00000573710 ZNF771Q7L3S4 317 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-202ENST00000573710 LTV1Q96GA3 475 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-202ENST00000573710 ZFYVE27Q5T4F4 411 aa19.8■□□□□ 0.76
CACNA1A-202ENST00000573710 PLEKHD1A6NEE1 506 aa19.8■□□□□ 0.76
CACNA1A-202ENST00000573710 SF3A1Q15459 793 aaKnown RBP19.8■□□□□ 0.76
CACNA1A-202ENST00000573710 HTATSF1O43719 755 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 MS4A1P11836 297 aa19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 ITPRIPQ8IWB1 547 aa19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 MAP7D2Q96T17 732 aa19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 MEX3CQ5U5Q3 659 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 CCDC34Q96HJ3 373 aa19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 WDR70Q9NW82 654 aa19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 GPATCH3Q96I76 525 aa19.78■□□□□ 0.76
CACNA1A-202ENST00000573710 AEBP2Q6ZN18 517 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-202ENST00000573710 NUTM2FA1L443 756 aa19.77■□□□□ 0.76
CACNA1A-202ENST00000573710 MORC1Q86VD1 984 aa19.77■□□□□ 0.75
CACNA1A-202ENST00000573710 PPM1FP49593 454 aaPredicted RBP19.76■□□□□ 0.75
CACNA1A-202ENST00000573710 NGEFQ8N5V2 710 aa19.76■□□□□ 0.75
CACNA1A-202ENST00000573710 USP35Q9P2H5 1018 aa19.75■□□□□ 0.75
CACNA1A-202ENST00000573710 DHX16O60231 1041 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-202ENST00000573710 ODF2Q5BJF6 829 aa19.75■□□□□ 0.75
CACNA1A-202ENST00000573710 NAP1L1P55209 391 aaKnown RBP19.74■□□□□ 0.75
CACNA1A-202ENST00000573710 DCAF8L1A6NGE4 600 aa19.72■□□□□ 0.75
CACNA1A-202ENST00000573710 CCDC97Q96F63 343 aaPredicted RBP19.72■□□□□ 0.75
CACNA1A-202ENST00000573710 GBP4Q96PP9 640 aa19.72■□□□□ 0.75
CACNA1A-202ENST00000573710 MFAP1P55081 439 aaKnown RBP19.72■□□□□ 0.75
CACNA1A-202ENST00000573710 SYAP1Q96A49 352 aaPredicted RBP19.71■□□□□ 0.75
CACNA1A-202ENST00000573710 CT47A1Q5JQC4 288 aaPredicted RBP19.7■□□□□ 0.74
CACNA1A-202ENST00000573710 CCDC43Q96MW1 224 aaKnown RBP19.7■□□□□ 0.74
CACNA1A-202ENST00000573710 SYTL4Q96C24 671 aaPredicted RBP19.7■□□□□ 0.74
CACNA1A-202ENST00000573710 H3BQV1 296 aa19.69■□□□□ 0.74
CACNA1A-202ENST00000573710 AKAP17AQ02040 695 aaKnown RBP19.69■□□□□ 0.74
CACNA1A-202ENST00000573710 IFFO2Q5TF58 517 aa19.69■□□□□ 0.74
CACNA1A-202ENST00000573710 EVA1CP58658 441 aa19.69■□□□□ 0.74
CACNA1A-202ENST00000573710 PPP1R1BQ9UD71 204 aaPredicted RBP19.69■□□□□ 0.74
CACNA1A-202ENST00000573710 TPM2P07951 284 aa19.69■□□□□ 0.74
CACNA1A-202ENST00000573710 CCDC70Q6NSX1 233 aa19.69■□□□□ 0.74
CACNA1A-202ENST00000573710 CFDP1Q9UEE9 299 aaPredicted RBP19.67■□□□□ 0.74
CACNA1A-202ENST00000573710 SLC4A3P48751 1232 aa19.66■□□□□ 0.74
CACNA1A-202ENST00000573710 MCTP1Q6DN14 999 aa19.66■□□□□ 0.74
CACNA1A-202ENST00000573710 HDGFP51858 240 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms