RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 CCNB3Q8WWL7 1395 aa27.03■■□□□ 1.92
LITAF-212ENST00000573332 NCOA2Q15596 1464 aa27.02■■□□□ 1.92
LITAF-212ENST00000573332 PREX2Q70Z35 1606 aa27.01■■□□□ 1.92
LITAF-212ENST00000573332 ARHGAP5Q13017 1502 aa27■■□□□ 1.91
LITAF-212ENST00000573332 SUPT6HQ7KZ85 1726 aaKnown RBP27■■□□□ 1.91
LITAF-212ENST00000573332 CDC42BPBQ9Y5S2 1711 aa26.98■■□□□ 1.91
LITAF-212ENST00000573332 CDC42BPAQ5VT25 1732 aa26.97■■□□□ 1.91
LITAF-212ENST00000573332 ADGRL1O94910 1474 aa26.95■■□□□ 1.91
LITAF-212ENST00000573332 CFDP1Q9UEE9 299 aaPredicted RBP26.95■■□□□ 1.9
LITAF-212ENST00000573332 DENND4BO75064 1496 aaPredicted RBP26.94■■□□□ 1.9
LITAF-212ENST00000573332 SCAPERQ9BY12 1400 aa26.93■■□□□ 1.9
LITAF-212ENST00000573332 RAPGEF3O95398 923 aa26.91■■□□□ 1.9
LITAF-212ENST00000573332 ITSN2Q9NZM3 1697 aa26.89■■□□□ 1.89
LITAF-212ENST00000573332 POGZQ7Z3K3 1410 aa26.86■■□□□ 1.89
LITAF-212ENST00000573332 ZNF777Q9ULD5 760 aaPredicted RBP26.86■■□□□ 1.89
LITAF-212ENST00000573332 KIAA1107Q9UPP5 1409 aa26.86■■□□□ 1.89
LITAF-212ENST00000573332 PLEKHH2Q8IVE3 1493 aa26.86■■□□□ 1.89
LITAF-212ENST00000573332 ABCC1P33527 1531 aa26.85■■□□□ 1.89
LITAF-212ENST00000573332 FRMPD1Q5SYB0 1578 aa26.85■■□□□ 1.89
LITAF-212ENST00000573332 SAMD9LQ8IVG5 1584 aa26.84■■□□□ 1.89
LITAF-212ENST00000573332 MYOM3Q5VTT5 1437 aa26.84■■□□□ 1.89
LITAF-212ENST00000573332 MIA2Q96PC5 1412 aa26.83■■□□□ 1.89
LITAF-212ENST00000573332 ARHGEF12Q9NZN5 1544 aa26.83■■□□□ 1.89
LITAF-212ENST00000573332 RICTORQ6R327 1708 aa26.82■■□□□ 1.88
LITAF-212ENST00000573332 ZNF518AQ6AHZ1 1483 aa26.81■■□□□ 1.88
LITAF-212ENST00000573332 ZNF644Q9H582 1327 aaPredicted RBP26.8■■□□□ 1.88
LITAF-212ENST00000573332 ZMYM4Q5VZL5 1548 aa26.8■■□□□ 1.88
LITAF-212ENST00000573332 AFAP1Q8N556 730 aa26.78■■□□□ 1.88
LITAF-212ENST00000573332 TRAPPC8Q9Y2L5 1435 aa26.78■■□□□ 1.88
LITAF-212ENST00000573332 MAGI2Q86UL8 1455 aa26.78■■□□□ 1.88
LITAF-212ENST00000573332 HNRNPMP52272 730 aaKnown RBP eCLIP26.76■■□□□ 1.871e-6■■■□□ 15.6
LITAF-212ENST00000573332 KDM5CP41229 1560 aa26.75■■□□□ 1.87
LITAF-212ENST00000573332 SYCP2Q9BX26 1530 aa26.75■■□□□ 1.87
LITAF-212ENST00000573332 MBD5Q9P267 1494 aa26.74■■□□□ 1.87
LITAF-212ENST00000573332 CAMSAP2Q08AD1 1489 aa26.74■■□□□ 1.87
LITAF-212ENST00000573332 RSPH4AQ5TD94 716 aa26.73■■□□□ 1.87
LITAF-212ENST00000573332 MLH3Q9UHC1 1453 aa26.71■■□□□ 1.87
LITAF-212ENST00000573332 FGD6Q6ZV73 1430 aa26.71■■□□□ 1.87
LITAF-212ENST00000573332 YEATS2Q9ULM3 1422 aa26.66■■□□□ 1.86
LITAF-212ENST00000573332 ZFYVE16Q7Z3T8 1539 aa26.66■■□□□ 1.86
LITAF-212ENST00000573332 PPARGC1BQ86YN6 1023 aaKnown RBP26.66■■□□□ 1.86
LITAF-212ENST00000573332 TCOF1Q13428 1488 aaKnown RBP26.66■■□□□ 1.86
LITAF-212ENST00000573332 ARHGEF40Q8TER5 1519 aa26.65■■□□□ 1.86
LITAF-212ENST00000573332 ARHGEF5Q12774 1597 aa26.64■■□□□ 1.86
LITAF-212ENST00000573332 HECW2Q9P2P5 1572 aa26.64■■□□□ 1.86
LITAF-212ENST00000573332 SPAG9O60271 1321 aaKnown RBP26.64■■□□□ 1.85
LITAF-212ENST00000573332 CCDC141Q6ZP82 1450 aa26.63■■□□□ 1.85
LITAF-212ENST00000573332 PTPN23Q9H3S7 1636 aa26.62■■□□□ 1.85
LITAF-212ENST00000573332 RTEL1-TNFRSF6BF6WH68 1400 aa26.6■■□□□ 1.85
LITAF-212ENST00000573332 ATP10AO60312 1499 aa26.6■■□□□ 1.85
LITAF-212ENST00000573332 MYT1LQ9UL68 1186 aa26.59■■□□□ 1.85
LITAF-212ENST00000573332 TSPY4P0CV99 314 aa26.57■■□□□ 1.84
LITAF-212ENST00000573332 TSPY10P0CW01 314 aa26.57■■□□□ 1.84
LITAF-212ENST00000573332 KIDINS220Q9ULH0 1771 aa26.56■■□□□ 1.84
LITAF-212ENST00000573332 ATP7AQ04656 1500 aa26.55■■□□□ 1.84
LITAF-212ENST00000573332 INO80Q9ULG1 1556 aaPredicted RBP26.55■■□□□ 1.84
LITAF-212ENST00000573332 C9orf84Q5VXU9 1444 aa26.55■■□□□ 1.84
LITAF-212ENST00000573332 DIP2CQ9Y2E4 1556 aa26.54■■□□□ 1.84
LITAF-212ENST00000573332 ABCC5O15440 1437 aa26.52■■□□□ 1.84
LITAF-212ENST00000573332 ABCA6Q8N139 1617 aa26.52■■□□□ 1.84
LITAF-212ENST00000573332 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.52■■□□□ 1.84
LITAF-212ENST00000573332 REREQ9P2R6 1566 aa26.52■■□□□ 1.84
LITAF-212ENST00000573332 FAM50AQ14320 339 aaKnown RBP26.5■■□□□ 1.83
LITAF-212ENST00000573332 MAST1Q9Y2H9 1570 aa26.5■■□□□ 1.83
LITAF-212ENST00000573332 DAPK1P53355 1430 aa26.49■■□□□ 1.83
LITAF-212ENST00000573332 SHANK2Q9UPX8 1470 aa26.48■■□□□ 1.83
LITAF-212ENST00000573332 RRBP1Q9P2E9 1410 aaKnown RBP26.48■■□□□ 1.83
LITAF-212ENST00000573332 DNMT1P26358 1616 aaKnown RBP26.47■■□□□ 1.83
LITAF-212ENST00000573332 ARID4BQ4LE39 1312 aaPredicted RBP26.45■■□□□ 1.83
LITAF-212ENST00000573332 AGLP35573 1532 aa26.44■■□□□ 1.82
LITAF-212ENST00000573332 KDM4FA0A1W2PPD8 638 aa26.44■■□□□ 1.82
LITAF-212ENST00000573332 A2MP01023 1474 aa26.43■■□□□ 1.82
LITAF-212ENST00000573332 SIGLEC1Q9BZZ2 1709 aa26.41■■□□□ 1.82
LITAF-212ENST00000573332 DHX29Q7Z478 1369 aaKnown RBP26.41■■□□□ 1.82
LITAF-212ENST00000573332 CROCC2H7BZ55 1655 aa26.39■■□□□ 1.82
LITAF-212ENST00000573332 PLXNC1O60486 1568 aa26.39■■□□□ 1.82
LITAF-212ENST00000573332 ADGBQ8N7X0 1667 aa26.38■■□□□ 1.81
LITAF-212ENST00000573332 BCORL1Q5H9F3 1711 aa26.36■■□□□ 1.81
LITAF-212ENST00000573332 ADGRL2O95490 1459 aa26.35■■□□□ 1.81
LITAF-212ENST00000573332 ANKRD30AQ9BXX3 1397 aa26.34■■□□□ 1.81
LITAF-212ENST00000573332 PTPRKQ15262 1439 aa26.33■■□□□ 1.81
LITAF-212ENST00000573332 NCOA1Q15788 1441 aa26.33■■□□□ 1.81
LITAF-212ENST00000573332 CHIC2Q9UKJ5 165 aa26.33■■□□□ 1.81
LITAF-212ENST00000573332 ADAMTSL3P82987 1691 aa26.33■■□□□ 1.81
LITAF-212ENST00000573332 KIF15Q9NS87 1388 aa26.31■■□□□ 1.8
LITAF-212ENST00000573332 MLECQ14165 292 aa26.3■■□□□ 1.8
LITAF-212ENST00000573332 DUOX2Q9NRD8 1548 aa26.29■■□□□ 1.8
LITAF-212ENST00000573332 RRP7BPQ9NSQ0 103 aa26.29■■□□□ 1.8
LITAF-212ENST00000573332 ROCK1Q13464 1354 aa26.28■■□□□ 1.8
LITAF-212ENST00000573332 PPP6R1Q9UPN7 881 aa26.26■■□□□ 1.79
LITAF-212ENST00000573332 KIF3BO15066 747 aa26.25■■□□□ 1.79
LITAF-212ENST00000573332 ERBINQ96RT1 1412 aa26.24■■□□□ 1.79
LITAF-212ENST00000573332 ITGAEP38570 1179 aa26.23■■□□□ 1.79
LITAF-212ENST00000573332 MADDQ8WXG6 1647 aa26.22■■□□□ 1.79
LITAF-212ENST00000573332 GGT6Q6P531 493 aa26.21■■□□□ 1.79
LITAF-212ENST00000573332 EIF2AK4Q9P2K8 1649 aaKnown RBP26.21■■□□□ 1.79
LITAF-212ENST00000573332 PTPRMP28827 1452 aa26.18■■□□□ 1.78
LITAF-212ENST00000573332 CNTLNQ9NXG0 1405 aa26.17■■□□□ 1.78
LITAF-212ENST00000573332 ANKRD50Q9ULJ7 1429 aa26.16■■□□□ 1.78
LITAF-212ENST00000573332 ESF1Q9H501 851 aaKnown RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms