RNA–Protein interactions for RNA: ENST00000573123.1

CXCL16-202, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS ALT2 TSL 2

Gene CXCL16, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-202ENST00000573123 KIF14Q15058 1648 aa29■■■□□ 2.23
CXCL16-202ENST00000573123 MADDQ8WXG6 1647 aa28.99■■■□□ 2.23
CXCL16-202ENST00000573123 MYO5CQ9NQX4 1742 aa28.97■■■□□ 2.23
CXCL16-202ENST00000573123 YEATS2Q9ULM3 1422 aa28.95■■■□□ 2.23
CXCL16-202ENST00000573123 CASKIN1Q8WXD9 1431 aa28.92■■■□□ 2.22
CXCL16-202ENST00000573123 CCDC18Q5T9S5 1454 aa28.91■■■□□ 2.22
CXCL16-202ENST00000573123 ILDR1Q86SU0 546 aaPredicted RBP28.91■■■□□ 2.22
CXCL16-202ENST00000573123 ARHGAP5Q13017 1502 aa28.89■■■□□ 2.22
CXCL16-202ENST00000573123 PCF11O94913 1555 aaKnown RBP28.88■■■□□ 2.21
CXCL16-202ENST00000573123 RIMS1Q86UR5 1692 aaKnown RBP28.87■■■□□ 2.21
CXCL16-202ENST00000573123 ZNF518AQ6AHZ1 1483 aa28.86■■■□□ 2.21
CXCL16-202ENST00000573123 ATP10AO60312 1499 aa28.85■■■□□ 2.21
CXCL16-202ENST00000573123 LRRIQ1Q96JM4 1722 aa28.84■■■□□ 2.21
CXCL16-202ENST00000573123 C9orf84Q5VXU9 1444 aa28.84■■■□□ 2.21
CXCL16-202ENST00000573123 FYCO1Q9BQS8 1478 aa28.81■■■□□ 2.2
CXCL16-202ENST00000573123 MLECQ14165 292 aa28.8■■■□□ 2.2
CXCL16-202ENST00000573123 SIGLEC1Q9BZZ2 1709 aa28.79■■■□□ 2.2
CXCL16-202ENST00000573123 LMTK3Q96Q04 1460 aa28.78■■■□□ 2.2
CXCL16-202ENST00000573123 KDM5CP41229 1560 aa28.78■■■□□ 2.2
CXCL16-202ENST00000573123 AFAP1Q8N556 730 aa28.75■■■□□ 2.19
CXCL16-202ENST00000573123 MYT1LQ9UL68 1186 aa28.75■■■□□ 2.19
CXCL16-202ENST00000573123 PREX2Q70Z35 1606 aa28.74■■■□□ 2.19
CXCL16-202ENST00000573123 PLPPR3Q6T4P5 718 aa28.74■■■□□ 2.19
CXCL16-202ENST00000573123 ARHGEF12Q9NZN5 1544 aa28.73■■■□□ 2.19
CXCL16-202ENST00000573123 FER1L4A9Z1Z3 1794 aa28.73■■■□□ 2.19
CXCL16-202ENST00000573123 CDC42BPBQ9Y5S2 1711 aa28.72■■■□□ 2.19
CXCL16-202ENST00000573123 ABCC1P33527 1531 aa28.69■■■□□ 2.18
CXCL16-202ENST00000573123 MLH3Q9UHC1 1453 aa28.68■■■□□ 2.18
CXCL16-202ENST00000573123 DIP2CQ9Y2E4 1556 aa28.66■■■□□ 2.18
CXCL16-202ENST00000573123 REREQ9P2R6 1566 aa28.65■■■□□ 2.18
CXCL16-202ENST00000573123 TRAPPC8Q9Y2L5 1435 aa28.64■■■□□ 2.18
CXCL16-202ENST00000573123 ITSN2Q9NZM3 1697 aa28.62■■■□□ 2.17
CXCL16-202ENST00000573123 HSPA2P54652 639 aa28.61■■■□□ 2.17
CXCL16-202ENST00000573123 CDC42BPAQ5VT25 1732 aa28.6■■■□□ 2.17
CXCL16-202ENST00000573123 ABCA6Q8N139 1617 aa28.6■■■□□ 2.17
CXCL16-202ENST00000573123 ZNF777Q9ULD5 760 aaPredicted RBP28.57■■■□□ 2.16
CXCL16-202ENST00000573123 AGLP35573 1532 aa28.56■■■□□ 2.16
CXCL16-202ENST00000573123 FBXO41Q8TF61 875 aa28.56■■■□□ 2.16
CXCL16-202ENST00000573123 GPATCH8Q9UKJ3 1502 aaKnown RBP28.56■■■□□ 2.16
CXCL16-202ENST00000573123 MTUS2Q5JR59 1369 aa28.55■■■□□ 2.16
CXCL16-202ENST00000573123 ESF1Q9H501 851 aaKnown RBP28.53■■■□□ 2.16
CXCL16-202ENST00000573123 CCNB3Q8WWL7 1395 aa28.52■■■□□ 2.16
CXCL16-202ENST00000573123 CEBPAP49715 358 aaPredicted RBP28.52■■■□□ 2.16
CXCL16-202ENST00000573123 SAMD9LQ8IVG5 1584 aa28.52■■■□□ 2.16
CXCL16-202ENST00000573123 PLEKHH2Q8IVE3 1493 aa28.52■■■□□ 2.16
CXCL16-202ENST00000573123 SYCP2Q9BX26 1530 aa28.51■■■□□ 2.15
CXCL16-202ENST00000573123 CFDP1Q9UEE9 299 aaPredicted RBP28.5■■■□□ 2.15
CXCL16-202ENST00000573123 PREX1Q8TCU6 1659 aa28.5■■■□□ 2.15
CXCL16-202ENST00000573123 KIDINS220Q9ULH0 1771 aa28.5■■■□□ 2.15
CXCL16-202ENST00000573123 KIAA1107Q9UPP5 1409 aa28.49■■■□□ 2.15
CXCL16-202ENST00000573123 SPAG9O60271 1321 aaKnown RBP28.48■■■□□ 2.15
CXCL16-202ENST00000573123 CEP162Q5TB80 1403 aa28.46■■■□□ 2.15
CXCL16-202ENST00000573123 UHRF1BP1Q6BDS2 1440 aa28.46■■■□□ 2.15
CXCL16-202ENST00000573123 HNRNPMP52272 730 aaKnown RBP eCLIP28.45■■■□□ 2.14
CXCL16-202ENST00000573123 CNTLNQ9NXG0 1405 aa28.44■■■□□ 2.14
CXCL16-202ENST00000573123 EHBP1L1Q8N3D4 1523 aa28.44■■■□□ 2.14
CXCL16-202ENST00000573123 ATP7AQ04656 1500 aa28.4■■■□□ 2.14
CXCL16-202ENST00000573123 SETD1BQ9UPS6 1966 aaKnown RBP28.38■■■□□ 2.13
CXCL16-202ENST00000573123 C3P01024 1663 aa28.37■■■□□ 2.13
CXCL16-202ENST00000573123 TIAM1Q13009 1591 aa28.36■■■□□ 2.13
CXCL16-202ENST00000573123 INO80Q9ULG1 1556 aaPredicted RBP28.36■■■□□ 2.13
CXCL16-202ENST00000573123 DMRT2Q9Y5R5 561 aa28.35■■■□□ 2.13
CXCL16-202ENST00000573123 A2MP01023 1474 aa28.33■■■□□ 2.13
CXCL16-202ENST00000573123 PLXNC1O60486 1568 aa28.3■■■□□ 2.12
CXCL16-202ENST00000573123 CERKQ8TCT0 537 aa28.28■■■□□ 2.12
CXCL16-202ENST00000573123 SUPT6HQ7KZ85 1726 aaKnown RBP28.28■■■□□ 2.12
CXCL16-202ENST00000573123 MROH2AA6NES4 1674 aa28.28■■■□□ 2.12
CXCL16-202ENST00000573123 NPATQ14207 1427 aa28.27■■■□□ 2.12
CXCL16-202ENST00000573123 ZNF644Q9H582 1327 aaPredicted RBP28.27■■■□□ 2.12
CXCL16-202ENST00000573123 MBD5Q9P267 1494 aa28.26■■■□□ 2.11
CXCL16-202ENST00000573123 ZMYM3Q14202 1370 aa28.24■■■□□ 2.11
CXCL16-202ENST00000573123 RTEL1-TNFRSF6BF6WH68 1400 aa28.24■■■□□ 2.11
CXCL16-202ENST00000573123 NCOA2Q15596 1464 aa28.23■■■□□ 2.11
CXCL16-202ENST00000573123 ADGBQ8N7X0 1667 aa28.23■■■□□ 2.11
CXCL16-202ENST00000573123 STRCQ7RTU9 1775 aa28.22■■■□□ 2.11
CXCL16-202ENST00000573123 GGT6Q6P531 493 aa28.21■■■□□ 2.11
CXCL16-202ENST00000573123 PTPRTO14522 1441 aa28.2■■■□□ 2.11
CXCL16-202ENST00000573123 PPP6R1Q9UPN7 881 aa28.2■■■□□ 2.1
CXCL16-202ENST00000573123 CCDC141Q6ZP82 1450 aa28.19■■■□□ 2.1
CXCL16-202ENST00000573123 VPS8Q8N3P4 1428 aa28.18■■■□□ 2.1
CXCL16-202ENST00000573123 CAMSAP2Q08AD1 1489 aa28.17■■■□□ 2.1
CXCL16-202ENST00000573123 RSPH4AQ5TD94 716 aa28.17■■■□□ 2.1
CXCL16-202ENST00000573123 CLTCQ00610 1675 aaKnown RBP28.16■■■□□ 2.1
CXCL16-202ENST00000573123 NCOA1Q15788 1441 aa28.16■■■□□ 2.1
CXCL16-202ENST00000573123 DHX29Q7Z478 1369 aaKnown RBP28.15■■■□□ 2.1
CXCL16-202ENST00000573123 PTPRKQ15262 1439 aa28.11■■■□□ 2.09
CXCL16-202ENST00000573123 LOC105371045A0A1W2PR82 267 aa28.1■■■□□ 2.09
CXCL16-202ENST00000573123 LRRC9Q6ZRR7 1453 aa28.09■■■□□ 2.09
CXCL16-202ENST00000573123 CAMSAP1Q5T5Y3 1602 aa28.09■■■□□ 2.09
CXCL16-202ENST00000573123 ARHGEF5Q12774 1597 aa28.07■■■□□ 2.08
CXCL16-202ENST00000573123 MYO3AQ8NEV4 1616 aa28.07■■■□□ 2.08
CXCL16-202ENST00000573123 TSPY4P0CV99 314 aa28.05■■■□□ 2.08
CXCL16-202ENST00000573123 TSPY10P0CW01 314 aa28.05■■■□□ 2.08
CXCL16-202ENST00000573123 FAM135AQ9P2D6 1515 aa28.05■■■□□ 2.08
CXCL16-202ENST00000573123 ZNF142P52746 1687 aaPredicted RBP28.04■■■□□ 2.08
CXCL16-202ENST00000573123 KIF3BO15066 747 aa28.04■■■□□ 2.08
CXCL16-202ENST00000573123 CEP170BQ9Y4F5 1589 aaPredicted RBP28.03■■■□□ 2.08
CXCL16-202ENST00000573123 MAP3K1Q13233 1512 aa28.03■■■□□ 2.08
CXCL16-202ENST00000573123 PLA2R1Q13018 1463 aa28.02■■■□□ 2.08
CXCL16-202ENST00000573123 PKD2Q13563 968 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms