RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 KLHL34Q8N239 644 aa12.06□□□□□ -0.48
USP6-204ENST00000572949 CWC22Q9HCG8 908 aaKnown RBP12.05□□□□□ -0.48
USP6-204ENST00000572949 CC2D1BQ5T0F9 858 aaKnown RBP12.04□□□□□ -0.48
USP6-204ENST00000572949 CEP89Q96ST8 783 aa12.04□□□□□ -0.48
USP6-204ENST00000572949 GGT6Q6P531 493 aa12.04□□□□□ -0.48
USP6-204ENST00000572949 RASSF8Q8NHQ8 419 aa12.03□□□□□ -0.48
USP6-204ENST00000572949 MARCH6O60337 910 aa12.03□□□□□ -0.48
USP6-204ENST00000572949 HDGFL2Q7Z4V5 671 aaPredicted RBP12.03□□□□□ -0.48
USP6-204ENST00000572949 CTDP1Q9Y5B0 961 aaPredicted RBP12.03□□□□□ -0.48
USP6-204ENST00000572949 EID1Q9Y6B2 187 aa12.03□□□□□ -0.48
USP6-204ENST00000572949 A0A0U1RQG5 324 aaPredicted RBP12.02□□□□□ -0.49
USP6-204ENST00000572949 ANO8Q9HCE9 1232 aaPredicted RBP12.02□□□□□ -0.49
USP6-204ENST00000572949 TCEAL9Q9UHQ7 104 aa12.02□□□□□ -0.49
USP6-204ENST00000572949 RGS3P49796 1198 aa12.02□□□□□ -0.49
USP6-204ENST00000572949 ERICH6BQ5W0A0 696 aa12.02□□□□□ -0.49
USP6-204ENST00000572949 EVA1CP58658 441 aa12.01□□□□□ -0.49
USP6-204ENST00000572949 TRIM34Q9BYJ4 488 aa12.01□□□□□ -0.49
USP6-204ENST00000572949 CCDC34Q96HJ3 373 aa12□□□□□ -0.49
USP6-204ENST00000572949 APBB1O00213 710 aa12□□□□□ -0.49
USP6-204ENST00000572949 MORC1Q86VD1 984 aa12□□□□□ -0.49
USP6-204ENST00000572949 CHMP4AQ9BY43 222 aa12□□□□□ -0.49
USP6-204ENST00000572949 ZCCHC6Q5VYS8 1495 aaKnown RBP11.99□□□□□ -0.49
USP6-204ENST00000572949 WWC1Q8IX03 1113 aa11.99□□□□□ -0.49
USP6-204ENST00000572949 GPATCH3Q96I76 525 aa11.99□□□□□ -0.49
USP6-204ENST00000572949 TMF1P82094 1093 aa11.98□□□□□ -0.49
USP6-204ENST00000572949 CFAP44Q96MT7 982 aa11.98□□□□□ -0.49
USP6-204ENST00000572949 SPAG9O60271 1321 aaKnown RBP11.97□□□□□ -0.49
USP6-204ENST00000572949 HSCBQ8IWL3 235 aa11.97□□□□□ -0.49
USP6-204ENST00000572949 FBXO3Q9UK99 471 aa11.96□□□□□ -0.49
USP6-204ENST00000572949 CREBRFQ8IUR6 639 aa11.96□□□□□ -0.49
USP6-204ENST00000572949 TOMM22Q9NS69 142 aa11.96□□□□□ -0.5
USP6-204ENST00000572949 HSP90B1P14625 803 aaKnown RBP11.95□□□□□ -0.5
USP6-204ENST00000572949 DCAF1Q9Y4B6 1507 aa11.95□□□□□ -0.5
USP6-204ENST00000572949 NGDNQ8NEJ9 315 aaKnown RBP11.95□□□□□ -0.5
USP6-204ENST00000572949 HTATSF1O43719 755 aaKnown RBP11.95□□□□□ -0.5
USP6-204ENST00000572949 RAD21O60216 631 aa11.95□□□□□ -0.5
USP6-204ENST00000572949 CLIP1P30622 1438 aa11.95□□□□□ -0.5
USP6-204ENST00000572949 CALD1Q05682 793 aaKnown RBP11.95□□□□□ -0.5
USP6-204ENST00000572949 EIF4G1Q04637 1599 aaKnown RBP11.94□□□□□ -0.5
USP6-204ENST00000572949 NAP1L5Q96NT1 182 aaPredicted RBP11.94□□□□□ -0.5
USP6-204ENST00000572949 TPM4P67936 248 aa11.94□□□□□ -0.5
USP6-204ENST00000572949 DCAF11Q8TEB1 546 aa11.93□□□□□ -0.5
USP6-204ENST00000572949 HDAC5Q9UQL6 1122 aa11.93□□□□□ -0.5
USP6-204ENST00000572949 STK31Q9BXU1 1019 aa11.93□□□□□ -0.5
USP6-204ENST00000572949 NOL10Q9BSC4 688 aaKnown RBP11.93□□□□□ -0.5
USP6-204ENST00000572949 CCNB3Q8WWL7 1395 aa11.92□□□□□ -0.5
USP6-204ENST00000572949 IPO8O15397 1037 aaKnown RBP11.91□□□□□ -0.5
USP6-204ENST00000572949 FBXW7Q969H0 707 aa11.91□□□□□ -0.5
USP6-204ENST00000572949 AMOTL1Q8IY63 956 aa11.9□□□□□ -0.5
USP6-204ENST00000572949 AMPHP49418 695 aa11.9□□□□□ -0.5
USP6-204ENST00000572949 LTV1Q96GA3 475 aaPredicted RBP11.9□□□□□ -0.5
USP6-204ENST00000572949 MSNP26038 577 aaKnown RBP11.89□□□□□ -0.51
USP6-204ENST00000572949 RB1CC1Q8TDY2 1594 aa11.89□□□□□ -0.51
USP6-204ENST00000572949 TRIM6-TRIM34B2RNG4 842 aa11.87□□□□□ -0.51
USP6-204ENST00000572949 SPRYD3Q8NCJ5 442 aa11.87□□□□□ -0.51
USP6-204ENST00000572949 SYTL4Q96C24 671 aaPredicted RBP11.87□□□□□ -0.51
USP6-204ENST00000572949 PES1O00541 588 aaKnown RBP11.86□□□□□ -0.51
USP6-204ENST00000572949 FOXD1Q16676 465 aa11.86□□□□□ -0.51
USP6-204ENST00000572949 NUTM2FA1L443 756 aa11.85□□□□□ -0.51
USP6-204ENST00000572949 U2AF1L5P0DN76 240 aaPredicted RBP11.85□□□□□ -0.51
USP6-204ENST00000572949 U2AF1Q01081 240 aaKnown RBP eCLIP11.85□□□□□ -0.51
USP6-204ENST00000572949 AKAP17AQ02040 695 aaKnown RBP11.85□□□□□ -0.51
USP6-204ENST00000572949 VPS37DQ86XT2 251 aa11.84□□□□□ -0.51
USP6-204ENST00000572949 SF3B2Q13435 895 aaKnown RBP11.84□□□□□ -0.51
USP6-204ENST00000572949 SLC4A10Q6U841 1118 aa11.84□□□□□ -0.51
USP6-204ENST00000572949 GOLGA6L1Q8N7Z2 621 aa11.84□□□□□ -0.51
USP6-204ENST00000572949 CCAR1Q8IX12 1150 aaKnown RBP11.83□□□□□ -0.52
USP6-204ENST00000572949 CCDC43Q96MW1 224 aaKnown RBP11.83□□□□□ -0.52
USP6-204ENST00000572949 TPD52L1Q16890 204 aaPredicted RBP11.83□□□□□ -0.52
USP6-204ENST00000572949 SUPT16HQ9Y5B9 1047 aaKnown RBP11.83□□□□□ -0.52
USP6-204ENST00000572949 C1orf141Q5JVX7 400 aa11.83□□□□□ -0.52
USP6-204ENST00000572949 BAZ1BQ9UIG0 1483 aaKnown RBP11.82□□□□□ -0.52
USP6-204ENST00000572949 ITPRIPQ8IWB1 547 aa11.82□□□□□ -0.52
USP6-204ENST00000572949 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
USP6-204ENST00000572949 PPP1R1BQ9UD71 204 aaPredicted RBP11.82□□□□□ -0.52
USP6-204ENST00000572949 TPM3P06753 285 aa11.82□□□□□ -0.52
USP6-204ENST00000572949 KIF27Q86VH2 1401 aa11.81□□□□□ -0.52
USP6-204ENST00000572949 USP35Q9P2H5 1018 aa11.81□□□□□ -0.52
USP6-204ENST00000572949 TSR1Q2NL82 804 aaKnown RBP11.81□□□□□ -0.52
USP6-204ENST00000572949 B4GALNT3Q6L9W6 998 aa11.81□□□□□ -0.52
USP6-204ENST00000572949 TERF2IPQ9NYB0 399 aa11.81□□□□□ -0.52
USP6-204ENST00000572949 HMMRO75330 724 aa11.8□□□□□ -0.52
USP6-204ENST00000572949 DHX16O60231 1041 aaKnown RBP11.8□□□□□ -0.52
USP6-204ENST00000572949 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.8□□□□□ -0.52
USP6-204ENST00000572949 SF3A1Q15459 793 aaKnown RBP11.8□□□□□ -0.52
USP6-204ENST00000572949 TPM2P07951 284 aa11.79□□□□□ -0.52
USP6-204ENST00000572949 SYAP1Q96A49 352 aaPredicted RBP11.79□□□□□ -0.52
USP6-204ENST00000572949 R3HCC1Q9Y3T6 440 aaKnown RBP11.79□□□□□ -0.52
USP6-204ENST00000572949 KIF3AQ9Y496 699 aa11.79□□□□□ -0.52
USP6-204ENST00000572949 CSPP1Q1MSJ5 1256 aa11.78□□□□□ -0.52
USP6-204ENST00000572949 SYNE3Q6ZMZ3 975 aa11.78□□□□□ -0.52
USP6-204ENST00000572949 TTC5Q8N0Z6 440 aa11.78□□□□□ -0.52
USP6-204ENST00000572949 RBM33Q96EV2 1170 aaKnown RBP11.78□□□□□ -0.52
USP6-204ENST00000572949 WASHC2CQ9Y4E1 1318 aa11.78□□□□□ -0.52
USP6-204ENST00000572949 CARMIL2Q6F5E8 1435 aa11.77□□□□□ -0.52
USP6-204ENST00000572949 PAF1Q8N7H5 531 aa11.77□□□□□ -0.53
USP6-204ENST00000572949 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.77□□□□□ -0.53
USP6-204ENST00000572949 NGEFQ8N5V2 710 aa11.77□□□□□ -0.53
USP6-204ENST00000572949 NUTM2DQ5VT03 806 aaPredicted RBP11.77□□□□□ -0.53
USP6-204ENST00000572949 LRRFIP1Q32MZ4 808 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms