RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 YEATS2Q9ULM3 1422 aa33.49■■■□□ 2.95
CHRNB1-204ENST00000572857 ARHGEF40Q8TER5 1519 aa33.48■■■□□ 2.95
CHRNB1-204ENST00000572857 ZMYM4Q5VZL5 1548 aa33.46■■■□□ 2.95
CHRNB1-204ENST00000572857 ZFYVE16Q7Z3T8 1539 aa33.44■■■□□ 2.94
CHRNB1-204ENST00000572857 MAGI2Q86UL8 1455 aa33.44■■■□□ 2.94
CHRNB1-204ENST00000572857 AFAP1Q8N556 730 aa33.42■■■□□ 2.94
CHRNB1-204ENST00000572857 ADAMTSL3P82987 1691 aa33.4■■■□□ 2.94
CHRNB1-204ENST00000572857 PTPRMP28827 1452 aa33.39■■■□□ 2.94
CHRNB1-204ENST00000572857 MYT1LQ9UL68 1186 aa33.39■■■□□ 2.94
CHRNB1-204ENST00000572857 CEP162Q5TB80 1403 aa33.38■■■□□ 2.93
CHRNB1-204ENST00000572857 BCORL1Q5H9F3 1711 aa33.37■■■□□ 2.93
CHRNB1-204ENST00000572857 MLECQ14165 292 aa33.37■■■□□ 2.93
CHRNB1-204ENST00000572857 HECW2Q9P2P5 1572 aa33.36■■■□□ 2.93
CHRNB1-204ENST00000572857 LOC105371045A0A1W2PR82 267 aa33.36■■■□□ 2.93
CHRNB1-204ENST00000572857 ZNF518AQ6AHZ1 1483 aa33.34■■■□□ 2.93
CHRNB1-204ENST00000572857 ZNF777Q9ULD5 760 aaPredicted RBP33.33■■■□□ 2.93
CHRNB1-204ENST00000572857 MADDQ8WXG6 1647 aa33.31■■■□□ 2.92
CHRNB1-204ENST00000572857 ATP10AO60312 1499 aa33.31■■■□□ 2.92
CHRNB1-204ENST00000572857 CDC42BPBQ9Y5S2 1711 aa33.31■■■□□ 2.92
CHRNB1-204ENST00000572857 PLPPR3Q6T4P5 718 aa33.29■■■□□ 2.92
CHRNB1-204ENST00000572857 MTUS2Q5JR59 1369 aa33.29■■■□□ 2.92
CHRNB1-204ENST00000572857 PREX2Q70Z35 1606 aa33.28■■■□□ 2.92
CHRNB1-204ENST00000572857 TRAPPC8Q9Y2L5 1435 aa33.26■■■□□ 2.91
CHRNB1-204ENST00000572857 C9orf84Q5VXU9 1444 aa33.25■■■□□ 2.91
CHRNB1-204ENST00000572857 ARHGEF12Q9NZN5 1544 aa33.24■■■□□ 2.91
CHRNB1-204ENST00000572857 SIGLEC1Q9BZZ2 1709 aa33.24■■■□□ 2.91
CHRNB1-204ENST00000572857 GPATCH8Q9UKJ3 1502 aaKnown RBP33.23■■■□□ 2.91
CHRNB1-204ENST00000572857 CCNB3Q8WWL7 1395 aa33.21■■■□□ 2.91
CHRNB1-204ENST00000572857 KDM5CP41229 1560 aa33.21■■■□□ 2.91
CHRNB1-204ENST00000572857 CFDP1Q9UEE9 299 aaPredicted RBP33.21■■■□□ 2.91
CHRNB1-204ENST00000572857 ABCC1P33527 1531 aa33.21■■■□□ 2.91
CHRNB1-204ENST00000572857 CDC42BPAQ5VT25 1732 aa33.19■■■□□ 2.9
CHRNB1-204ENST00000572857 RIMS1Q86UR5 1692 aaKnown RBP33.18■■■□□ 2.9
CHRNB1-204ENST00000572857 HNRNPMP52272 730 aaKnown RBP eCLIP33.17■■■□□ 2.9
CHRNB1-204ENST00000572857 MLH3Q9UHC1 1453 aa33.16■■■□□ 2.9
CHRNB1-204ENST00000572857 ITSN2Q9NZM3 1697 aa33.1■■■□□ 2.89
CHRNB1-204ENST00000572857 SAMD9LQ8IVG5 1584 aa33.09■■■□□ 2.89
CHRNB1-204ENST00000572857 DIP2CQ9Y2E4 1556 aa33.09■■■□□ 2.89
CHRNB1-204ENST00000572857 SPAG9O60271 1321 aaKnown RBP33.07■■■□□ 2.88
CHRNB1-204ENST00000572857 EHBP1L1Q8N3D4 1523 aa33.07■■■□□ 2.88
CHRNB1-204ENST00000572857 SYCP2Q9BX26 1530 aa33.07■■■□□ 2.88
CHRNB1-204ENST00000572857 ABCA6Q8N139 1617 aa33.05■■■□□ 2.88
CHRNB1-204ENST00000572857 ZNF644Q9H582 1327 aaPredicted RBP33.04■■■□□ 2.88
CHRNB1-204ENST00000572857 KIAA1107Q9UPP5 1409 aa33.03■■■□□ 2.88
CHRNB1-204ENST00000572857 CEBPAP49715 358 aaPredicted RBP33.03■■■□□ 2.88
CHRNB1-204ENST00000572857 PLEKHH2Q8IVE3 1493 aa33.03■■■□□ 2.88
CHRNB1-204ENST00000572857 FER1L4A9Z1Z3 1794 aa33.01■■■□□ 2.88
CHRNB1-204ENST00000572857 LMTK3Q96Q04 1460 aa33■■■□□ 2.87
CHRNB1-204ENST00000572857 VPS8Q8N3P4 1428 aa33■■■□□ 2.87
CHRNB1-204ENST00000572857 HSPA2P54652 639 aa32.98■■■□□ 2.87
CHRNB1-204ENST00000572857 TIAM1Q13009 1591 aa32.98■■■□□ 2.87
CHRNB1-204ENST00000572857 REREQ9P2R6 1566 aa32.98■■■□□ 2.87
CHRNB1-204ENST00000572857 KIDINS220Q9ULH0 1771 aa32.98■■■□□ 2.87
CHRNB1-204ENST00000572857 ESF1Q9H501 851 aaKnown RBP32.97■■■□□ 2.87
CHRNB1-204ENST00000572857 AGLP35573 1532 aa32.93■■■□□ 2.86
CHRNB1-204ENST00000572857 NCOA2Q15596 1464 aa32.93■■■□□ 2.86
CHRNB1-204ENST00000572857 ATP7AQ04656 1500 aa32.88■■■□□ 2.85
CHRNB1-204ENST00000572857 ILDR1Q86SU0 546 aaPredicted RBP32.88■■■□□ 2.85
CHRNB1-204ENST00000572857 MBD5Q9P267 1494 aa32.86■■■□□ 2.85
CHRNB1-204ENST00000572857 KANK4Q5T7N3 995 aaPredicted RBP32.85■■■□□ 2.85
CHRNB1-204ENST00000572857 SUPT6HQ7KZ85 1726 aaKnown RBP32.85■■■□□ 2.85
CHRNB1-204ENST00000572857 LRRC9Q6ZRR7 1453 aa32.83■■■□□ 2.85
CHRNB1-204ENST00000572857 A2MP01023 1474 aa32.81■■■□□ 2.84
CHRNB1-204ENST00000572857 INO80Q9ULG1 1556 aaPredicted RBP32.8■■■□□ 2.84
CHRNB1-204ENST00000572857 GGT6Q6P531 493 aa32.77■■■□□ 2.84
CHRNB1-204ENST00000572857 CAMSAP2Q08AD1 1489 aa32.77■■■□□ 2.84
CHRNB1-204ENST00000572857 CNTLNQ9NXG0 1405 aa32.76■■■□□ 2.83
CHRNB1-204ENST00000572857 RSPH4AQ5TD94 716 aa32.75■■■□□ 2.83
CHRNB1-204ENST00000572857 APLP2Q06481 763 aa32.74■■■□□ 2.83
CHRNB1-204ENST00000572857 RTEL1-TNFRSF6BF6WH68 1400 aa32.73■■■□□ 2.83
CHRNB1-204ENST00000572857 MAP3K1Q13233 1512 aa32.72■■■□□ 2.83
CHRNB1-204ENST00000572857 UHRF1BP1Q6BDS2 1440 aa32.71■■■□□ 2.83
CHRNB1-204ENST00000572857 CCDC141Q6ZP82 1450 aa32.71■■■□□ 2.83
CHRNB1-204ENST00000572857 PLXNC1O60486 1568 aa32.7■■■□□ 2.82
CHRNB1-204ENST00000572857 ZMYM3Q14202 1370 aa32.69■■■□□ 2.82
CHRNB1-204ENST00000572857 TSPY4P0CV99 314 aa32.68■■■□□ 2.82
CHRNB1-204ENST00000572857 TSPY10P0CW01 314 aa32.68■■■□□ 2.82
CHRNB1-204ENST00000572857 C3P01024 1663 aa32.68■■■□□ 2.82
CHRNB1-204ENST00000572857 PREX1Q8TCU6 1659 aa32.68■■■□□ 2.82
CHRNB1-204ENST00000572857 DHX29Q7Z478 1369 aaKnown RBP32.66■■■□□ 2.82
CHRNB1-204ENST00000572857 ADGBQ8N7X0 1667 aa32.62■■■□□ 2.81
CHRNB1-204ENST00000572857 KIF3BO15066 747 aa32.62■■■□□ 2.81
CHRNB1-204ENST00000572857 SETD1BQ9UPS6 1966 aaKnown RBP32.61■■■□□ 2.81
CHRNB1-204ENST00000572857 PPP6R1Q9UPN7 881 aa32.61■■■□□ 2.81
CHRNB1-204ENST00000572857 MYOM3Q5VTT5 1437 aa32.6■■■□□ 2.81
CHRNB1-204ENST00000572857 ARHGEF5Q12774 1597 aa32.57■■■□□ 2.8
CHRNB1-204ENST00000572857 MIA2Q96PC5 1412 aa32.56■■■□□ 2.8
CHRNB1-204ENST00000572857 NPATQ14207 1427 aa32.55■■■□□ 2.8
CHRNB1-204ENST00000572857 CLTCQ00610 1675 aaKnown RBP32.54■■■□□ 2.8
CHRNB1-204ENST00000572857 MROH2AA6NES4 1674 aa32.53■■■□□ 2.8
CHRNB1-204ENST00000572857 DMRT2Q9Y5R5 561 aa32.53■■■□□ 2.8
CHRNB1-204ENST00000572857 FBXO41Q8TF61 875 aa32.52■■■□□ 2.8
CHRNB1-204ENST00000572857 PTPRKQ15262 1439 aa32.48■■■□□ 2.79
CHRNB1-204ENST00000572857 WASHC2CQ9Y4E1 1318 aa32.47■■■□□ 2.79
CHRNB1-204ENST00000572857 STRCQ7RTU9 1775 aa32.42■■■□□ 2.78
CHRNB1-204ENST00000572857 CERKQ8TCT0 537 aa32.41■■■□□ 2.78
CHRNB1-204ENST00000572857 FBXO31Q5XUX0 539 aaPredicted RBP32.4■■■□□ 2.78
CHRNB1-204ENST00000572857 MAST1Q9Y2H9 1570 aa32.38■■■□□ 2.77
CHRNB1-204ENST00000572857 NCOA1Q15788 1441 aa32.36■■■□□ 2.77
CHRNB1-204ENST00000572857 KDM5DQ9BY66 1539 aa32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms