RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 POGZQ7Z3K3 1410 aa19.01■□□□□ 0.63
PRPF8-206ENST00000572723 KIF14Q15058 1648 aa19.01■□□□□ 0.63
PRPF8-206ENST00000572723 LRRIQ1Q96JM4 1722 aa19.01■□□□□ 0.63
PRPF8-206ENST00000572723 YEATS2Q9ULM3 1422 aa19■□□□□ 0.63
PRPF8-206ENST00000572723 ZFYVE16Q7Z3T8 1539 aa19■□□□□ 0.63
PRPF8-206ENST00000572723 CCDC18Q5T9S5 1454 aa19■□□□□ 0.63
PRPF8-206ENST00000572723 MADDQ8WXG6 1647 aa18.97■□□□□ 0.63
PRPF8-206ENST00000572723 AFAP1Q8N556 730 aa18.97■□□□□ 0.63
PRPF8-206ENST00000572723 ATP10AO60312 1499 aa18.97■□□□□ 0.63
PRPF8-206ENST00000572723 ARHGAP5Q13017 1502 aa18.96■□□□□ 0.63
PRPF8-206ENST00000572723 PCF11O94913 1555 aaKnown RBP18.94■□□□□ 0.62
PRPF8-206ENST00000572723 ZNF518AQ6AHZ1 1483 aa18.94■□□□□ 0.62
PRPF8-206ENST00000572723 FYCO1Q9BQS8 1478 aa18.94■□□□□ 0.62
PRPF8-206ENST00000572723 MLECQ14165 292 aa18.93■□□□□ 0.62
PRPF8-206ENST00000572723 CDC42BPBQ9Y5S2 1711 aa18.93■□□□□ 0.62
PRPF8-206ENST00000572723 ILDR1Q86SU0 546 aaPredicted RBP18.92■□□□□ 0.62
PRPF8-206ENST00000572723 MYT1LQ9UL68 1186 aa18.92■□□□□ 0.62
PRPF8-206ENST00000572723 RIMS1Q86UR5 1692 aaKnown RBP18.91■□□□□ 0.62
PRPF8-206ENST00000572723 C9orf84Q5VXU9 1444 aa18.91■□□□□ 0.62
PRPF8-206ENST00000572723 SIGLEC1Q9BZZ2 1709 aa18.9■□□□□ 0.62
PRPF8-206ENST00000572723 KDM5CP41229 1560 aa18.88■□□□□ 0.61
PRPF8-206ENST00000572723 PREX2Q70Z35 1606 aa18.86■□□□□ 0.61
PRPF8-206ENST00000572723 MLH3Q9UHC1 1453 aa18.86■□□□□ 0.61
PRPF8-206ENST00000572723 PLPPR3Q6T4P5 718 aa18.86■□□□□ 0.61
PRPF8-206ENST00000572723 TRAPPC8Q9Y2L5 1435 aa18.84■□□□□ 0.61
PRPF8-206ENST00000572723 CDC42BPAQ5VT25 1732 aa18.84■□□□□ 0.61
PRPF8-206ENST00000572723 ZNF777Q9ULD5 760 aaPredicted RBP18.84■□□□□ 0.61
PRPF8-206ENST00000572723 ARHGEF12Q9NZN5 1544 aa18.84■□□□□ 0.61
PRPF8-206ENST00000572723 LMTK3Q96Q04 1460 aa18.84■□□□□ 0.61
PRPF8-206ENST00000572723 FER1L4A9Z1Z3 1794 aa18.83■□□□□ 0.6
PRPF8-206ENST00000572723 ABCC1P33527 1531 aa18.82■□□□□ 0.6
PRPF8-206ENST00000572723 GPATCH8Q9UKJ3 1502 aaKnown RBP18.82■□□□□ 0.6
PRPF8-206ENST00000572723 CFDP1Q9UEE9 299 aaPredicted RBP18.81■□□□□ 0.6
PRPF8-206ENST00000572723 SETD1BQ9UPS6 1966 aaKnown RBP18.81■□□□□ 0.6
PRPF8-206ENST00000572723 MTUS2Q5JR59 1369 aa18.8■□□□□ 0.6
PRPF8-206ENST00000572723 HNRNPMP52272 730 aaKnown RBP eCLIP18.79■□□□□ 0.6
PRPF8-206ENST00000572723 REREQ9P2R6 1566 aa18.79■□□□□ 0.6
PRPF8-206ENST00000572723 DIP2CQ9Y2E4 1556 aa18.79■□□□□ 0.6
PRPF8-206ENST00000572723 CCNB3Q8WWL7 1395 aa18.79■□□□□ 0.6
PRPF8-206ENST00000572723 ITSN2Q9NZM3 1697 aa18.79■□□□□ 0.6
PRPF8-206ENST00000572723 CEBPAP49715 358 aaPredicted RBP18.78■□□□□ 0.6
PRPF8-206ENST00000572723 HSPA2P54652 639 aa18.78■□□□□ 0.6
PRPF8-206ENST00000572723 CEP162Q5TB80 1403 aa18.76■□□□□ 0.59
PRPF8-206ENST00000572723 KIAA1107Q9UPP5 1409 aa18.76■□□□□ 0.59
PRPF8-206ENST00000572723 AGLP35573 1532 aa18.76■□□□□ 0.59
PRPF8-206ENST00000572723 ESF1Q9H501 851 aaKnown RBP18.76■□□□□ 0.59
PRPF8-206ENST00000572723 SPAG9O60271 1321 aaKnown RBP18.75■□□□□ 0.59
PRPF8-206ENST00000572723 PLEKHH2Q8IVE3 1493 aa18.75■□□□□ 0.59
PRPF8-206ENST00000572723 KIDINS220Q9ULH0 1771 aa18.75■□□□□ 0.59
PRPF8-206ENST00000572723 ABCA6Q8N139 1617 aa18.74■□□□□ 0.59
PRPF8-206ENST00000572723 SAMD9LQ8IVG5 1584 aa18.74■□□□□ 0.59
PRPF8-206ENST00000572723 FBXO41Q8TF61 875 aa18.71■□□□□ 0.59
PRPF8-206ENST00000572723 SYCP2Q9BX26 1530 aa18.7■□□□□ 0.58
PRPF8-206ENST00000572723 LOC105371045A0A1W2PR82 267 aa18.69■□□□□ 0.58
PRPF8-206ENST00000572723 PREX1Q8TCU6 1659 aa18.67■□□□□ 0.58
PRPF8-206ENST00000572723 EHBP1L1Q8N3D4 1523 aa18.67■□□□□ 0.58
PRPF8-206ENST00000572723 ZNF644Q9H582 1327 aaPredicted RBP18.67■□□□□ 0.58
PRPF8-206ENST00000572723 CNTLNQ9NXG0 1405 aa18.66■□□□□ 0.58
PRPF8-206ENST00000572723 DMRT2Q9Y5R5 561 aa18.65■□□□□ 0.58
PRPF8-206ENST00000572723 RSPH4AQ5TD94 716 aa18.64■□□□□ 0.57
PRPF8-206ENST00000572723 UHRF1BP1Q6BDS2 1440 aa18.64■□□□□ 0.57
PRPF8-206ENST00000572723 ATP7AQ04656 1500 aa18.64■□□□□ 0.57
PRPF8-206ENST00000572723 TIAM1Q13009 1591 aa18.63■□□□□ 0.57
PRPF8-206ENST00000572723 C3P01024 1663 aa18.63■□□□□ 0.57
PRPF8-206ENST00000572723 PPP6R1Q9UPN7 881 aa18.62■□□□□ 0.57
PRPF8-206ENST00000572723 A2MP01023 1474 aa18.62■□□□□ 0.57
PRPF8-206ENST00000572723 MBD5Q9P267 1494 aa18.62■□□□□ 0.57
PRPF8-206ENST00000572723 ZMYM3Q14202 1370 aa18.61■□□□□ 0.57
PRPF8-206ENST00000572723 SUPT6HQ7KZ85 1726 aaKnown RBP18.6■□□□□ 0.57
PRPF8-206ENST00000572723 RTEL1-TNFRSF6BF6WH68 1400 aa18.6■□□□□ 0.57
PRPF8-206ENST00000572723 INO80Q9ULG1 1556 aaPredicted RBP18.59■□□□□ 0.57
PRPF8-206ENST00000572723 GGT6Q6P531 493 aa18.59■□□□□ 0.57
PRPF8-206ENST00000572723 NCOA2Q15596 1464 aa18.58■□□□□ 0.57
PRPF8-206ENST00000572723 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
PRPF8-206ENST00000572723 CERKQ8TCT0 537 aa18.57■□□□□ 0.56
PRPF8-206ENST00000572723 PLXNC1O60486 1568 aa18.56■□□□□ 0.56
PRPF8-206ENST00000572723 NPATQ14207 1427 aa18.56■□□□□ 0.56
PRPF8-206ENST00000572723 STRCQ7RTU9 1775 aa18.55■□□□□ 0.56
PRPF8-206ENST00000572723 MROH2AA6NES4 1674 aa18.55■□□□□ 0.56
PRPF8-206ENST00000572723 ADGBQ8N7X0 1667 aa18.55■□□□□ 0.56
PRPF8-206ENST00000572723 DHX29Q7Z478 1369 aaKnown RBP18.55■□□□□ 0.56
PRPF8-206ENST00000572723 TSPY4P0CV99 314 aa18.53■□□□□ 0.56
PRPF8-206ENST00000572723 TSPY10P0CW01 314 aa18.53■□□□□ 0.56
PRPF8-206ENST00000572723 LRRC9Q6ZRR7 1453 aa18.52■□□□□ 0.56
PRPF8-206ENST00000572723 CAMSAP2Q08AD1 1489 aa18.51■□□□□ 0.55
PRPF8-206ENST00000572723 CCDC141Q6ZP82 1450 aa18.51■□□□□ 0.55
PRPF8-206ENST00000572723 PTPRTO14522 1441 aa18.5■□□□□ 0.55
PRPF8-206ENST00000572723 MAP3K1Q13233 1512 aa18.5■□□□□ 0.55
PRPF8-206ENST00000572723 KIF3BO15066 747 aa18.5■□□□□ 0.55
PRPF8-206ENST00000572723 KANK4Q5T7N3 995 aaPredicted RBP18.5■□□□□ 0.55
PRPF8-206ENST00000572723 CLTCQ00610 1675 aaKnown RBP18.5■□□□□ 0.55
PRPF8-206ENST00000572723 PTPRKQ15262 1439 aa18.48■□□□□ 0.55
PRPF8-206ENST00000572723 ARHGEF5Q12774 1597 aa18.46■□□□□ 0.55
PRPF8-206ENST00000572723 NCOA1Q15788 1441 aa18.45■□□□□ 0.54
PRPF8-206ENST00000572723 APLP2Q06481 763 aa18.44■□□□□ 0.54
PRPF8-206ENST00000572723 MIA2Q96PC5 1412 aa18.43■□□□□ 0.54
PRPF8-206ENST00000572723 WASHC2CQ9Y4E1 1318 aa18.43■□□□□ 0.54
PRPF8-206ENST00000572723 PKD2Q13563 968 aa18.42■□□□□ 0.54
PRPF8-206ENST00000572723 CAMSAP1Q5T5Y3 1602 aa18.41■□□□□ 0.54
PRPF8-206ENST00000572723 NCKAP5LQ9HCH0 1330 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms