RNA–Protein interactions for RNA: ENST00000572558.5

COX11-204, Transcript of cytochrome c oxidase copper chaperone COX11, humanhuman

TSL 3

Gene COX11, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX11-204ENST00000572558 SCAPERQ9BY12 1400 aa25.09■■□□□ 1.61
COX11-204ENST00000572558 PCF11O94913 1555 aaKnown RBP25.08■■□□□ 1.61
COX11-204ENST00000572558 LMTK3Q96Q04 1460 aa25.06■■□□□ 1.6
COX11-204ENST00000572558 EFCAB2Q5VUJ9 269 aa25.05■■□□□ 1.6
COX11-204ENST00000572558 SIGLEC1Q9BZZ2 1709 aa25.05■■□□□ 1.6
COX11-204ENST00000572558 MYO5CQ9NQX4 1742 aa25.03■■□□□ 1.6
COX11-204ENST00000572558 TROQ12816 1431 aaPredicted RBP25.01■■□□□ 1.59
COX11-204ENST00000572558 KIF14Q15058 1648 aa25.01■■□□□ 1.59
COX11-204ENST00000572558 MLECQ14165 292 aa24.98■■□□□ 1.59
COX11-204ENST00000572558 ATP10AO60312 1499 aa24.97■■□□□ 1.59
COX11-204ENST00000572558 FBXO41Q8TF61 875 aa24.97■■□□□ 1.59
COX11-204ENST00000572558 CLIP1P30622 1438 aa24.96■■□□□ 1.59
COX11-204ENST00000572558 PLPPR3Q6T4P5 718 aa24.96■■□□□ 1.59
COX11-204ENST00000572558 C9orf84Q5VXU9 1444 aa24.95■■□□□ 1.58
COX11-204ENST00000572558 ARHGAP5Q13017 1502 aa24.94■■□□□ 1.58
COX11-204ENST00000572558 LRRIQ1Q96JM4 1722 aa24.94■■□□□ 1.58
COX11-204ENST00000572558 FER1L4A9Z1Z3 1794 aa24.93■■□□□ 1.58
COX11-204ENST00000572558 ZNF518AQ6AHZ1 1483 aa24.93■■□□□ 1.58
COX11-204ENST00000572558 HSPA2P54652 639 aa24.91■■□□□ 1.58
COX11-204ENST00000572558 ARHGEF12Q9NZN5 1544 aa24.91■■□□□ 1.58
COX11-204ENST00000572558 AFAP1Q8N556 730 aa24.89■■□□□ 1.58
COX11-204ENST00000572558 KDM5CP41229 1560 aa24.88■■□□□ 1.57
COX11-204ENST00000572558 CASKIN1Q8WXD9 1431 aa24.88■■□□□ 1.57
COX11-204ENST00000572558 CCDC18Q5T9S5 1454 aa24.86■■□□□ 1.57
COX11-204ENST00000572558 CDC42BPBQ9Y5S2 1711 aa24.85■■□□□ 1.57
COX11-204ENST00000572558 MYT1LQ9UL68 1186 aa24.82■■□□□ 1.56
COX11-204ENST00000572558 PREX2Q70Z35 1606 aa24.81■■□□□ 1.56
COX11-204ENST00000572558 DIP2CQ9Y2E4 1556 aa24.8■■□□□ 1.56
COX11-204ENST00000572558 MLH3Q9UHC1 1453 aa24.8■■□□□ 1.56
COX11-204ENST00000572558 REREQ9P2R6 1566 aa24.79■■□□□ 1.56
COX11-204ENST00000572558 ABCC1P33527 1531 aa24.78■■□□□ 1.56
COX11-204ENST00000572558 CEBPAP49715 358 aaPredicted RBP24.78■■□□□ 1.56
COX11-204ENST00000572558 TRAPPC8Q9Y2L5 1435 aa24.77■■□□□ 1.56
COX11-204ENST00000572558 FYCO1Q9BQS8 1478 aa24.77■■□□□ 1.56
COX11-204ENST00000572558 PREX1Q8TCU6 1659 aa24.76■■□□□ 1.55
COX11-204ENST00000572558 ABCA6Q8N139 1617 aa24.75■■□□□ 1.55
COX11-204ENST00000572558 ITSN2Q9NZM3 1697 aa24.74■■□□□ 1.55
COX11-204ENST00000572558 CDC42BPAQ5VT25 1732 aa24.72■■□□□ 1.55
COX11-204ENST00000572558 AGLP35573 1532 aa24.71■■□□□ 1.55
COX11-204ENST00000572558 SETD1BQ9UPS6 1966 aaKnown RBP24.69■■□□□ 1.54
COX11-204ENST00000572558 CERKQ8TCT0 537 aa24.68■■□□□ 1.54
COX11-204ENST00000572558 UHRF1BP1Q6BDS2 1440 aa24.68■■□□□ 1.54
COX11-204ENST00000572558 KIDINS220Q9ULH0 1771 aa24.67■■□□□ 1.54
COX11-204ENST00000572558 ESF1Q9H501 851 aaKnown RBP24.65■■□□□ 1.54
COX11-204ENST00000572558 GPATCH8Q9UKJ3 1502 aaKnown RBP24.65■■□□□ 1.54
COX11-204ENST00000572558 ZNF777Q9ULD5 760 aaPredicted RBP24.64■■□□□ 1.54
COX11-204ENST00000572558 C3P01024 1663 aa24.64■■□□□ 1.53
COX11-204ENST00000572558 SAMD9LQ8IVG5 1584 aa24.63■■□□□ 1.53
COX11-204ENST00000572558 DMRT2Q9Y5R5 561 aa24.62■■□□□ 1.53
COX11-204ENST00000572558 STRCQ7RTU9 1775 aa24.61■■□□□ 1.53
COX11-204ENST00000572558 SYCP2Q9BX26 1530 aa24.6■■□□□ 1.53
COX11-204ENST00000572558 CNTLNQ9NXG0 1405 aa24.59■■□□□ 1.53
COX11-204ENST00000572558 SPAG9O60271 1321 aaKnown RBP24.59■■□□□ 1.53
COX11-204ENST00000572558 HNRNPMP52272 730 aaKnown RBP eCLIP24.58■■□□□ 1.53
COX11-204ENST00000572558 KIAA1107Q9UPP5 1409 aa24.57■■□□□ 1.52
COX11-204ENST00000572558 CFDP1Q9UEE9 299 aaPredicted RBP24.56■■□□□ 1.52
COX11-204ENST00000572558 PLEKHH2Q8IVE3 1493 aa24.56■■□□□ 1.52
COX11-204ENST00000572558 CCNB3Q8WWL7 1395 aa24.54■■□□□ 1.52
COX11-204ENST00000572558 MTUS2Q5JR59 1369 aa24.53■■□□□ 1.52
COX11-204ENST00000572558 ATP7AQ04656 1500 aa24.51■■□□□ 1.51
COX11-204ENST00000572558 PTPRTO14522 1441 aa24.51■■□□□ 1.51
COX11-204ENST00000572558 INO80Q9ULG1 1556 aaPredicted RBP24.5■■□□□ 1.51
COX11-204ENST00000572558 MROH2AA6NES4 1674 aa24.5■■□□□ 1.51
COX11-204ENST00000572558 SUPT6HQ7KZ85 1726 aaKnown RBP24.49■■□□□ 1.51
COX11-204ENST00000572558 ZMYM3Q14202 1370 aa24.48■■□□□ 1.51
COX11-204ENST00000572558 NPATQ14207 1427 aa24.48■■□□□ 1.51
COX11-204ENST00000572558 PLXNC1O60486 1568 aa24.47■■□□□ 1.51
COX11-204ENST00000572558 A2MP01023 1474 aa24.46■■□□□ 1.51
COX11-204ENST00000572558 NCOA1Q15788 1441 aa24.44■■□□□ 1.5
COX11-204ENST00000572558 TIAM1Q13009 1591 aa24.43■■□□□ 1.5
COX11-204ENST00000572558 EHBP1L1Q8N3D4 1523 aa24.43■■□□□ 1.5
COX11-204ENST00000572558 ZNF644Q9H582 1327 aaPredicted RBP24.42■■□□□ 1.5
COX11-204ENST00000572558 CLTCQ00610 1675 aaKnown RBP24.4■■□□□ 1.5
COX11-204ENST00000572558 MBD5Q9P267 1494 aa24.39■■□□□ 1.5
COX11-204ENST00000572558 CEP162Q5TB80 1403 aa24.39■■□□□ 1.5
COX11-204ENST00000572558 GGT6Q6P531 493 aa24.39■■□□□ 1.49
COX11-204ENST00000572558 ADGBQ8N7X0 1667 aa24.38■■□□□ 1.49
COX11-204ENST00000572558 CAMSAP1Q5T5Y3 1602 aa24.38■■□□□ 1.49
COX11-204ENST00000572558 PPP6R1Q9UPN7 881 aa24.37■■□□□ 1.49
COX11-204ENST00000572558 RTEL1-TNFRSF6BF6WH68 1400 aa24.35■■□□□ 1.49
COX11-204ENST00000572558 PTPRKQ15262 1439 aa24.35■■□□□ 1.49
COX11-204ENST00000572558 LTBP4Q8N2S1 1624 aa24.35■■□□□ 1.49
COX11-204ENST00000572558 MYO3AQ8NEV4 1616 aa24.32■■□□□ 1.48
COX11-204ENST00000572558 ZNF142P52746 1687 aaPredicted RBP24.31■■□□□ 1.48
COX11-204ENST00000572558 NCKAP5LQ9HCH0 1330 aa24.31■■□□□ 1.48
COX11-204ENST00000572558 DHX29Q7Z478 1369 aaKnown RBP24.3■■□□□ 1.48
COX11-204ENST00000572558 IQSEC2Q5JU85 1478 aa24.3■■□□□ 1.48
COX11-204ENST00000572558 CEP170BQ9Y4F5 1589 aaPredicted RBP24.29■■□□□ 1.48
COX11-204ENST00000572558 NCOA2Q15596 1464 aa24.29■■□□□ 1.48
COX11-204ENST00000572558 PLA2R1Q13018 1463 aa24.28■■□□□ 1.48
COX11-204ENST00000572558 PKD2Q13563 968 aa24.28■■□□□ 1.48
COX11-204ENST00000572558 CCDC141Q6ZP82 1450 aa24.27■■□□□ 1.48
COX11-204ENST00000572558 RSPH4AQ5TD94 716 aa24.25■■□□□ 1.47
COX11-204ENST00000572558 CAMSAP2Q08AD1 1489 aa24.25■■□□□ 1.47
COX11-204ENST00000572558 TCOF1Q13428 1488 aaKnown RBP24.25■■□□□ 1.47
COX11-204ENST00000572558 KIF3BO15066 747 aa24.23■■□□□ 1.47
COX11-204ENST00000572558 ZNF335Q9H4Z2 1342 aaPredicted RBP24.21■■□□□ 1.47
COX11-204ENST00000572558 A2ML1A8K2U0 1454 aa24.2■■□□□ 1.47
COX11-204ENST00000572558 FAM135AQ9P2D6 1515 aa24.19■■□□□ 1.46
COX11-204ENST00000572558 DISP3Q9P2K9 1392 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms