RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 CDK11AQ9UQ88 783 aaPredicted RBP24.32■■□□□ 1.48
NPLOC4-207ENST00000572346 POGZQ7Z3K3 1410 aa24.32■■□□□ 1.48
NPLOC4-207ENST00000572346 MYO5CQ9NQX4 1742 aa24.32■■□□□ 1.48
NPLOC4-207ENST00000572346 PCF11O94913 1555 aaKnown RBP24.29■■□□□ 1.48
NPLOC4-207ENST00000572346 KIF14Q15058 1648 aa24.29■■□□□ 1.48
NPLOC4-207ENST00000572346 LRRIQ1Q96JM4 1722 aa24.27■■□□□ 1.48
NPLOC4-207ENST00000572346 LMTK3Q96Q04 1460 aa24.27■■□□□ 1.48
NPLOC4-207ENST00000572346 EFCAB2Q5VUJ9 269 aa24.27■■□□□ 1.48
NPLOC4-207ENST00000572346 TROQ12816 1431 aaPredicted RBP24.27■■□□□ 1.48
NPLOC4-207ENST00000572346 CLIP1P30622 1438 aa24.22■■□□□ 1.47
NPLOC4-207ENST00000572346 MLECQ14165 292 aa24.21■■□□□ 1.47
NPLOC4-207ENST00000572346 ARHGAP5Q13017 1502 aa24.2■■□□□ 1.47
NPLOC4-207ENST00000572346 ATP10AO60312 1499 aa24.2■■□□□ 1.47
NPLOC4-207ENST00000572346 FER1L4A9Z1Z3 1794 aa24.19■■□□□ 1.46
NPLOC4-207ENST00000572346 PLPPR3Q6T4P5 718 aa24.19■■□□□ 1.46
NPLOC4-207ENST00000572346 ZNF518AQ6AHZ1 1483 aa24.18■■□□□ 1.46
NPLOC4-207ENST00000572346 C9orf84Q5VXU9 1444 aa24.18■■□□□ 1.46
NPLOC4-207ENST00000572346 CASKIN1Q8WXD9 1431 aa24.16■■□□□ 1.46
NPLOC4-207ENST00000572346 KDM5CP41229 1560 aa24.16■■□□□ 1.46
NPLOC4-207ENST00000572346 CDC42BPBQ9Y5S2 1711 aa24.15■■□□□ 1.46
NPLOC4-207ENST00000572346 ARHGEF12Q9NZN5 1544 aa24.15■■□□□ 1.46
NPLOC4-207ENST00000572346 AFAP1Q8N556 730 aa24.14■■□□□ 1.45
NPLOC4-207ENST00000572346 CCDC18Q5T9S5 1454 aa24.13■■□□□ 1.45
NPLOC4-207ENST00000572346 HSPA2P54652 639 aa24.13■■□□□ 1.45
NPLOC4-207ENST00000572346 FBXO41Q8TF61 875 aa24.13■■□□□ 1.45
NPLOC4-207ENST00000572346 PREX2Q70Z35 1606 aa24.1■■□□□ 1.45
NPLOC4-207ENST00000572346 DIP2CQ9Y2E4 1556 aa24.08■■□□□ 1.44
NPLOC4-207ENST00000572346 MYT1LQ9UL68 1186 aa24.06■■□□□ 1.44
NPLOC4-207ENST00000572346 ABCC1P33527 1531 aa24.05■■□□□ 1.44
NPLOC4-207ENST00000572346 FYCO1Q9BQS8 1478 aa24.05■■□□□ 1.44
NPLOC4-207ENST00000572346 MLH3Q9UHC1 1453 aa24.05■■□□□ 1.44
NPLOC4-207ENST00000572346 TRAPPC8Q9Y2L5 1435 aa24.04■■□□□ 1.44
NPLOC4-207ENST00000572346 ABCA6Q8N139 1617 aa24.04■■□□□ 1.44
NPLOC4-207ENST00000572346 REREQ9P2R6 1566 aa24.03■■□□□ 1.44
NPLOC4-207ENST00000572346 ITSN2Q9NZM3 1697 aa24.03■■□□□ 1.44
NPLOC4-207ENST00000572346 CDC42BPAQ5VT25 1732 aa24.03■■□□□ 1.44
NPLOC4-207ENST00000572346 CEBPAP49715 358 aaPredicted RBP24.02■■□□□ 1.44
NPLOC4-207ENST00000572346 PREX1Q8TCU6 1659 aa24.01■■□□□ 1.43
NPLOC4-207ENST00000572346 KIDINS220Q9ULH0 1771 aa23.96■■□□□ 1.43
NPLOC4-207ENST00000572346 AGLP35573 1532 aa23.96■■□□□ 1.43
NPLOC4-207ENST00000572346 SETD1BQ9UPS6 1966 aaKnown RBP23.93■■□□□ 1.42
NPLOC4-207ENST00000572346 SAMD9LQ8IVG5 1584 aa23.92■■□□□ 1.42
NPLOC4-207ENST00000572346 ZNF777Q9ULD5 760 aaPredicted RBP23.92■■□□□ 1.42
NPLOC4-207ENST00000572346 GPATCH8Q9UKJ3 1502 aaKnown RBP23.92■■□□□ 1.42
NPLOC4-207ENST00000572346 C3P01024 1663 aa23.91■■□□□ 1.42
NPLOC4-207ENST00000572346 UHRF1BP1Q6BDS2 1440 aa23.9■■□□□ 1.42
NPLOC4-207ENST00000572346 SYCP2Q9BX26 1530 aa23.89■■□□□ 1.42
NPLOC4-207ENST00000572346 ESF1Q9H501 851 aaKnown RBP23.87■■□□□ 1.41
NPLOC4-207ENST00000572346 STRCQ7RTU9 1775 aa23.86■■□□□ 1.41
NPLOC4-207ENST00000572346 CERKQ8TCT0 537 aa23.86■■□□□ 1.41
NPLOC4-207ENST00000572346 HNRNPMP52272 730 aaKnown RBP eCLIP23.85■■□□□ 1.41
NPLOC4-207ENST00000572346 SPAG9O60271 1321 aaKnown RBP23.84■■□□□ 1.41
NPLOC4-207ENST00000572346 CFDP1Q9UEE9 299 aaPredicted RBP23.83■■□□□ 1.41
NPLOC4-207ENST00000572346 KIAA1107Q9UPP5 1409 aa23.83■■□□□ 1.4
NPLOC4-207ENST00000572346 CCNB3Q8WWL7 1395 aa23.82■■□□□ 1.4
NPLOC4-207ENST00000572346 CNTLNQ9NXG0 1405 aa23.82■■□□□ 1.4
NPLOC4-207ENST00000572346 PLEKHH2Q8IVE3 1493 aa23.81■■□□□ 1.4
NPLOC4-207ENST00000572346 MTUS2Q5JR59 1369 aa23.81■■□□□ 1.4
NPLOC4-207ENST00000572346 ATP7AQ04656 1500 aa23.8■■□□□ 1.4
NPLOC4-207ENST00000572346 DMRT2Q9Y5R5 561 aa23.8■■□□□ 1.4
NPLOC4-207ENST00000572346 SUPT6HQ7KZ85 1726 aaKnown RBP23.79■■□□□ 1.4
NPLOC4-207ENST00000572346 INO80Q9ULG1 1556 aaPredicted RBP23.78■■□□□ 1.4
NPLOC4-207ENST00000572346 MROH2AA6NES4 1674 aa23.76■■□□□ 1.39
NPLOC4-207ENST00000572346 PLXNC1O60486 1568 aa23.75■■□□□ 1.39
NPLOC4-207ENST00000572346 TIAM1Q13009 1591 aa23.74■■□□□ 1.39
NPLOC4-207ENST00000572346 A2MP01023 1474 aa23.74■■□□□ 1.39
NPLOC4-207ENST00000572346 EHBP1L1Q8N3D4 1523 aa23.74■■□□□ 1.39
NPLOC4-207ENST00000572346 ZMYM3Q14202 1370 aa23.72■■□□□ 1.39
NPLOC4-207ENST00000572346 PTPRTO14522 1441 aa23.72■■□□□ 1.39
NPLOC4-207ENST00000572346 NPATQ14207 1427 aa23.72■■□□□ 1.39
NPLOC4-207ENST00000572346 CEP162Q5TB80 1403 aa23.71■■□□□ 1.39
NPLOC4-207ENST00000572346 ZNF644Q9H582 1327 aaPredicted RBP23.71■■□□□ 1.39
NPLOC4-207ENST00000572346 CLTCQ00610 1675 aaKnown RBP23.69■■□□□ 1.38
NPLOC4-207ENST00000572346 MBD5Q9P267 1494 aa23.68■■□□□ 1.38
NPLOC4-207ENST00000572346 NCOA1Q15788 1441 aa23.67■■□□□ 1.38
NPLOC4-207ENST00000572346 ADGBQ8N7X0 1667 aa23.67■■□□□ 1.38
NPLOC4-207ENST00000572346 GGT6Q6P531 493 aa23.65■■□□□ 1.38
NPLOC4-207ENST00000572346 CAMSAP1Q5T5Y3 1602 aa23.63■■□□□ 1.37
NPLOC4-207ENST00000572346 RTEL1-TNFRSF6BF6WH68 1400 aa23.62■■□□□ 1.37
NPLOC4-207ENST00000572346 PTPRKQ15262 1439 aa23.61■■□□□ 1.37
NPLOC4-207ENST00000572346 LTBP4Q8N2S1 1624 aa23.6■■□□□ 1.37
NPLOC4-207ENST00000572346 MYO3AQ8NEV4 1616 aa23.6■■□□□ 1.37
NPLOC4-207ENST00000572346 PPP6R1Q9UPN7 881 aa23.6■■□□□ 1.37
NPLOC4-207ENST00000572346 NCOA2Q15596 1464 aa23.6■■□□□ 1.37
NPLOC4-207ENST00000572346 ZNF142P52746 1687 aaPredicted RBP23.59■■□□□ 1.37
NPLOC4-207ENST00000572346 DHX29Q7Z478 1369 aaKnown RBP23.57■■□□□ 1.36
NPLOC4-207ENST00000572346 CEP170BQ9Y4F5 1589 aaPredicted RBP23.56■■□□□ 1.36
NPLOC4-207ENST00000572346 CAMSAP2Q08AD1 1489 aa23.56■■□□□ 1.36
NPLOC4-207ENST00000572346 CCDC141Q6ZP82 1450 aa23.56■■□□□ 1.36
NPLOC4-207ENST00000572346 PLA2R1Q13018 1463 aa23.54■■□□□ 1.36
NPLOC4-207ENST00000572346 NCKAP5LQ9HCH0 1330 aa23.54■■□□□ 1.36
NPLOC4-207ENST00000572346 RSPH4AQ5TD94 716 aa23.51■■□□□ 1.35
NPLOC4-207ENST00000572346 IQSEC2Q5JU85 1478 aa23.5■■□□□ 1.35
NPLOC4-207ENST00000572346 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
NPLOC4-207ENST00000572346 KIF3BO15066 747 aa23.5■■□□□ 1.35
NPLOC4-207ENST00000572346 TCOF1Q13428 1488 aaKnown RBP23.49■■□□□ 1.35
NPLOC4-207ENST00000572346 PKD2Q13563 968 aa23.49■■□□□ 1.35
NPLOC4-207ENST00000572346 VPS8Q8N3P4 1428 aa23.48■■□□□ 1.35
NPLOC4-207ENST00000572346 ARHGEF5Q12774 1597 aa23.48■■□□□ 1.35
NPLOC4-207ENST00000572346 A2ML1A8K2U0 1454 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms