RNA–Protein interactions for RNA: ENST00000572251.1

FBXO39-202, Transcript of F-box protein 39, humanhuman

TSL 1 (best)

Gene FBXO39, Length 917 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39-202ENST00000572251 SMARCA4P51532 1647 aa11.89□□□□□ -0.51
FBXO39-202ENST00000572251 TSHZ2Q9NRE2 1034 aa11.87□□□□□ -0.51
FBXO39-202ENST00000572251 PEG3Q9GZU2 1588 aa11.87□□□□□ -0.51
FBXO39-202ENST00000572251 PPP1R37O75864 691 aa11.86□□□□□ -0.51
FBXO39-202ENST00000572251 BAZ1AQ9NRL2 1556 aaPredicted RBP11.86□□□□□ -0.51
FBXO39-202ENST00000572251 HMGXB3Q12766 1538 aa11.86□□□□□ -0.51
FBXO39-202ENST00000572251 POTEGQ6S5H5 508 aa11.85□□□□□ -0.51
FBXO39-202ENST00000572251 SMARCA2P51531 1590 aa11.84□□□□□ -0.51
FBXO39-202ENST00000572251 ATAD2BQ9ULI0 1458 aa11.84□□□□□ -0.51
FBXO39-202ENST00000572251 PLCG2P16885 1265 aa11.84□□□□□ -0.51
FBXO39-202ENST00000572251 METRNQ9UJH8 293 aa11.83□□□□□ -0.52
FBXO39-202ENST00000572251 SEC24BO95487 1268 aa11.82□□□□□ -0.52
FBXO39-202ENST00000572251 POTEFA5A3E0 1075 aa11.81□□□□□ -0.52
FBXO39-202ENST00000572251 L3MBTL3Q96JM7 780 aaPredicted RBP11.8□□□□□ -0.52
FBXO39-202ENST00000572251 TMEM121BQ9BXQ6 578 aaPredicted RBP11.8□□□□□ -0.52
FBXO39-202ENST00000572251 COLQQ9Y215 455 aaPredicted RBP11.8□□□□□ -0.52
FBXO39-202ENST00000572251 DPY19L2Q6NUT2 758 aa11.78□□□□□ -0.52
FBXO39-202ENST00000572251 PCDH10Q9P2E7 1040 aa11.78□□□□□ -0.52
FBXO39-202ENST00000572251 OTUD5Q96G74 571 aa11.77□□□□□ -0.53
FBXO39-202ENST00000572251 BOLA1Q9Y3E2 137 aa11.76□□□□□ -0.53
FBXO39-202ENST00000572251 KDM2AQ9Y2K7 1162 aa11.75□□□□□ -0.53
FBXO39-202ENST00000572251 MICALL2Q8IY33 904 aa11.74□□□□□ -0.53
FBXO39-202ENST00000572251 CADPS2Q86UW7 1296 aa11.72□□□□□ -0.53
FBXO39-202ENST00000572251 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.53
FBXO39-202ENST00000572251 G3V3G9 751 aa11.7□□□□□ -0.54
FBXO39-202ENST00000572251 CRISPLD2Q9H0B8 497 aa11.7□□□□□ -0.54
FBXO39-202ENST00000572251 BAZ1BQ9UIG0 1483 aaKnown RBP11.7□□□□□ -0.54
FBXO39-202ENST00000572251 PDE4AP27815 886 aa11.69□□□□□ -0.54
FBXO39-202ENST00000572251 NCKAP5LQ9HCH0 1330 aa11.65□□□□□ -0.54
FBXO39-202ENST00000572251 MFSD10Q14728 455 aa11.65□□□□□ -0.54
FBXO39-202ENST00000572251 GPHNQ9NQX3 736 aaPredicted RBP11.64□□□□□ -0.55
FBXO39-202ENST00000572251 KIF3CO14782 793 aa11.62□□□□□ -0.55
FBXO39-202ENST00000572251 LAMC3Q9Y6N6 1575 aa11.62□□□□□ -0.55
FBXO39-202ENST00000572251 WDR70Q9NW82 654 aa11.61□□□□□ -0.55
FBXO39-202ENST00000572251 CUX2O14529 1486 aa11.61□□□□□ -0.55
FBXO39-202ENST00000572251 POTEB2H3BUK9 544 aa11.59□□□□□ -0.55
FBXO39-202ENST00000572251 C3orf67Q6ZVT6 689 aa11.58□□□□□ -0.56
FBXO39-202ENST00000572251 WIZO95785 1651 aa11.58□□□□□ -0.56
FBXO39-202ENST00000572251 FOXK1P85037 733 aa11.57□□□□□ -0.56
FBXO39-202ENST00000572251 MAMSTRQ6ZN01 415 aa11.57□□□□□ -0.56
FBXO39-202ENST00000572251 TMC2Q8TDI7 906 aa11.57□□□□□ -0.56
FBXO39-202ENST00000572251 DDX27Q96GQ7 796 aaKnown RBP11.57□□□□□ -0.56
FBXO39-202ENST00000572251 LARP6Q9BRS8 491 aaKnown RBP11.57□□□□□ -0.56
FBXO39-202ENST00000572251 POTEJP0CG39 1038 aa11.56□□□□□ -0.56
FBXO39-202ENST00000572251 P3H3Q8IVL6 736 aa11.55□□□□□ -0.56
FBXO39-202ENST00000572251 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.55□□□□□ -0.56
FBXO39-202ENST00000572251 NESP48681 1621 aa11.55□□□□□ -0.56
FBXO39-202ENST00000572251 ERCC6Q03468 1493 aa11.55□□□□□ -0.56
FBXO39-202ENST00000572251 C2orf72A6NCS6 295 aa11.54□□□□□ -0.56
FBXO39-202ENST00000572251 TMEM92Q6UXU6 159 aa11.54□□□□□ -0.56
FBXO39-202ENST00000572251 THOC2Q8NI27 1593 aaKnown RBP11.54□□□□□ -0.56
FBXO39-202ENST00000572251 CAMK2BQ13554 666 aa11.53□□□□□ -0.56
FBXO39-202ENST00000572251 E2F4Q16254 413 aa11.52□□□□□ -0.57
FBXO39-202ENST00000572251 PPP1R15BQ5SWA1 713 aa11.52□□□□□ -0.57
FBXO39-202ENST00000572251 ARIH1Q9Y4X5 557 aaPredicted RBP11.52□□□□□ -0.57
FBXO39-202ENST00000572251 RSF1Q96T23 1441 aaPredicted RBP11.52□□□□□ -0.57
FBXO39-202ENST00000572251 DSG2Q14126 1118 aa11.5□□□□□ -0.57
FBXO39-202ENST00000572251 SCUBE2Q9NQ36 999 aa11.5□□□□□ -0.57
FBXO39-202ENST00000572251 TOP2AP11388 1531 aaKnown RBP11.5□□□□□ -0.57
FBXO39-202ENST00000572251 KIF21AQ7Z4S6 1674 aa11.49□□□□□ -0.57
FBXO39-202ENST00000572251 CADPSQ9ULU8 1353 aa11.48□□□□□ -0.57
FBXO39-202ENST00000572251 PDS5BQ9NTI5 1447 aa11.47□□□□□ -0.57
FBXO39-202ENST00000572251 PLPP6Q8IY26 295 aa11.46□□□□□ -0.57
FBXO39-202ENST00000572251 ARHGEF1Q92888 912 aaKnown RBP11.46□□□□□ -0.57
FBXO39-202ENST00000572251 KCNV2Q8TDN2 545 aa11.44□□□□□ -0.58
FBXO39-202ENST00000572251 SLC34A2O95436 690 aa11.43□□□□□ -0.58
FBXO39-202ENST00000572251 CFTRP13569 1480 aa11.43□□□□□ -0.58
FBXO39-202ENST00000572251 PRDM2Q13029 1718 aa11.42□□□□□ -0.58
FBXO39-202ENST00000572251 BCANQ96GW7 911 aa11.41□□□□□ -0.58
FBXO39-202ENST00000572251 WDR62O43379 1518 aa11.4□□□□□ -0.58
FBXO39-202ENST00000572251 SLAIN1Q8ND83 568 aa11.39□□□□□ -0.59
FBXO39-202ENST00000572251 LCE2DQ5TA82 110 aaPredicted RBP11.38□□□□□ -0.59
FBXO39-202ENST00000572251 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
FBXO39-202ENST00000572251 PTCD2Q8WV60 388 aaKnown RBP11.37□□□□□ -0.59
FBXO39-202ENST00000572251 EMILIN3Q9NT22 766 aa11.37□□□□□ -0.59
FBXO39-202ENST00000572251 OXER1Q8TDS5 423 aa11.36□□□□□ -0.59
FBXO39-202ENST00000572251 FAM163AQ96GL9 167 aaPredicted RBP11.36□□□□□ -0.59
FBXO39-202ENST00000572251 CEP164Q9UPV0 1460 aa11.35□□□□□ -0.59
FBXO39-202ENST00000572251 FANCD2Q9BXW9 1451 aa11.34□□□□□ -0.59
FBXO39-202ENST00000572251 SPDYE16A6NNV3 312 aaPredicted RBP11.33□□□□□ -0.6
FBXO39-202ENST00000572251 NBR1Q14596 966 aa11.32□□□□□ -0.6
FBXO39-202ENST00000572251 ZSWIM6Q9HCJ5 1215 aa11.32□□□□□ -0.6
FBXO39-202ENST00000572251 SNPHO15079 494 aa11.31□□□□□ -0.6
FBXO39-202ENST00000572251 TBC1D12O60347 775 aa11.31□□□□□ -0.6
FBXO39-202ENST00000572251 DOK7Q18PE1 504 aa11.31□□□□□ -0.6
FBXO39-202ENST00000572251 CCDC88BA6NC98 1476 aa11.31□□□□□ -0.6
FBXO39-202ENST00000572251 HOXB3P14651 431 aaPredicted RBP11.29□□□□□ -0.6
FBXO39-202ENST00000572251 PDIA6Q15084 440 aa11.29□□□□□ -0.6
FBXO39-202ENST00000572251 DPYSL4O14531 572 aa11.27□□□□□ -0.61
FBXO39-202ENST00000572251 MAP3K9P80192 1104 aa11.27□□□□□ -0.61
FBXO39-202ENST00000572251 RIMBP2O15034 1052 aa11.26□□□□□ -0.61
FBXO39-202ENST00000572251 ANO8Q9HCE9 1232 aaPredicted RBP11.26□□□□□ -0.61
FBXO39-202ENST00000572251 URB2Q14146 1524 aaKnown RBP11.25□□□□□ -0.61
FBXO39-202ENST00000572251 PTGER2P43116 358 aa11.24□□□□□ -0.61
FBXO39-202ENST00000572251 KDM4FA0A1W2PPD8 638 aa11.23□□□□□ -0.61
FBXO39-202ENST00000572251 TESPA1A2RU30 521 aaPredicted RBP11.23□□□□□ -0.61
FBXO39-202ENST00000572251 PCDHGA4Q9Y5G9 962 aa11.23□□□□□ -0.61
FBXO39-202ENST00000572251 UPF1Q92900 1129 aaKnown RBP eCLIP11.22□□□□□ -0.61
FBXO39-202ENST00000572251 GPR153Q6NV75 609 aa11.21□□□□□ -0.61
FBXO39-202ENST00000572251 CDAN1Q8IWY9 1227 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms