RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 RAB3GAP2Q9H2M9 1393 aa9.15□□□□□ -0.94
TRAPPC1-204ENST00000571947 PLEKHD1A6NEE1 506 aa9.15□□□□□ -0.94
TRAPPC1-204ENST00000571947 GPATCH8Q9UKJ3 1502 aaKnown RBP9.15□□□□□ -0.95
TRAPPC1-204ENST00000571947 DHX57Q6P158 1386 aaKnown RBP9.14□□□□□ -0.95
TRAPPC1-204ENST00000571947 KDM5BQ9UGL1 1544 aa9.14□□□□□ -0.95
TRAPPC1-204ENST00000571947 PTPRKQ15262 1439 aa9.14□□□□□ -0.95
TRAPPC1-204ENST00000571947 CLSPNQ9HAW4 1339 aa9.13□□□□□ -0.95
TRAPPC1-204ENST00000571947 CAMSAP2Q08AD1 1489 aa9.13□□□□□ -0.95
TRAPPC1-204ENST00000571947 AKNAQ7Z591 1439 aa9.13□□□□□ -0.95
TRAPPC1-204ENST00000571947 OSCARQ8IYS5 282 aa9.12□□□□□ -0.95
TRAPPC1-204ENST00000571947 HFM1A2PYH4 1435 aa9.12□□□□□ -0.95
TRAPPC1-204ENST00000571947 TTC37Q6PGP7 1564 aa9.12□□□□□ -0.95
TRAPPC1-204ENST00000571947 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.1□□□□□ -0.95
TRAPPC1-204ENST00000571947 DAPK1P53355 1430 aa9.1□□□□□ -0.95
TRAPPC1-204ENST00000571947 NAIPQ13075 1403 aa9.1□□□□□ -0.95
TRAPPC1-204ENST00000571947 ARHGEF5Q12774 1597 aa9.1□□□□□ -0.95
TRAPPC1-204ENST00000571947 SAMD9LQ8IVG5 1584 aa9.09□□□□□ -0.95
TRAPPC1-204ENST00000571947 MAPKBP1O60336 1514 aa9.09□□□□□ -0.95
TRAPPC1-204ENST00000571947 KDM6BO15054 1643 aa9.09□□□□□ -0.95
TRAPPC1-204ENST00000571947 ABCC5O15440 1437 aa9.08□□□□□ -0.96
TRAPPC1-204ENST00000571947 CFDP1Q9UEE9 299 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC1-204ENST00000571947 ROCK1Q13464 1354 aa9.07□□□□□ -0.96
TRAPPC1-204ENST00000571947 ZNF644Q9H582 1327 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC1-204ENST00000571947 ADGRL2O95490 1459 aa9.06□□□□□ -0.96
TRAPPC1-204ENST00000571947 ABCA9Q8IUA7 1624 aa9.05□□□□□ -0.96
TRAPPC1-204ENST00000571947 SHANK2Q9UPX8 1470 aa9.05□□□□□ -0.96
TRAPPC1-204ENST00000571947 ARHGAP5Q13017 1502 aa9.05□□□□□ -0.96
TRAPPC1-204ENST00000571947 ARAP3Q8WWN8 1544 aa9.05□□□□□ -0.96
TRAPPC1-204ENST00000571947 MAST1Q9Y2H9 1570 aa9.04□□□□□ -0.96
TRAPPC1-204ENST00000571947 WDR7Q9Y4E6 1490 aa9.03□□□□□ -0.96
TRAPPC1-204ENST00000571947 CHIC2Q9UKJ5 165 aa9.03□□□□□ -0.96
TRAPPC1-204ENST00000571947 ACIN1Q9UKV3 1341 aaKnown RBP9.03□□□□□ -0.96
TRAPPC1-204ENST00000571947 PLEKHH2Q8IVE3 1493 aa9.02□□□□□ -0.96
TRAPPC1-204ENST00000571947 RIMBP3CA6NJZ7 1639 aa9.02□□□□□ -0.96
TRAPPC1-204ENST00000571947 RIMBP3BA6NNM3 1639 aa9.02□□□□□ -0.96
TRAPPC1-204ENST00000571947 RIMBP3Q9UFD9 1639 aa9.02□□□□□ -0.96
TRAPPC1-204ENST00000571947 RRP7BPQ9NSQ0 103 aa9.02□□□□□ -0.97
TRAPPC1-204ENST00000571947 ZNF777Q9ULD5 760 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC1-204ENST00000571947 MBD5Q9P267 1494 aa9.02□□□□□ -0.97
TRAPPC1-204ENST00000571947 SYCP2Q9BX26 1530 aa9.01□□□□□ -0.97
TRAPPC1-204ENST00000571947 PLCH2O75038 1416 aa9.01□□□□□ -0.97
TRAPPC1-204ENST00000571947 NCOA1Q15788 1441 aa9.01□□□□□ -0.97
TRAPPC1-204ENST00000571947 CCDC141Q6ZP82 1450 aa9.01□□□□□ -0.97
TRAPPC1-204ENST00000571947 ABCC1P33527 1531 aa9□□□□□ -0.97
TRAPPC1-204ENST00000571947 PLXNC1O60486 1568 aa9□□□□□ -0.97
TRAPPC1-204ENST00000571947 C9orf84Q5VXU9 1444 aa9□□□□□ -0.97
TRAPPC1-204ENST00000571947 ANKRD30AQ9BXX3 1397 aa8.99□□□□□ -0.97
TRAPPC1-204ENST00000571947 KIAA1107Q9UPP5 1409 aa8.99□□□□□ -0.97
TRAPPC1-204ENST00000571947 KCNH8Q96L42 1107 aa8.99□□□□□ -0.97
TRAPPC1-204ENST00000571947 CFAP74Q9C0B2 1584 aa8.99□□□□□ -0.97
TRAPPC1-204ENST00000571947 ASXL2Q76L83 1435 aa8.98□□□□□ -0.97
TRAPPC1-204ENST00000571947 RSPH4AQ5TD94 716 aa8.98□□□□□ -0.97
TRAPPC1-204ENST00000571947 DENND4BO75064 1496 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC1-204ENST00000571947 HNRNPMP52272 730 aaKnown RBP eCLIP8.97□□□□□ -0.97
TRAPPC1-204ENST00000571947 POTEDQ86YR6 584 aa8.97□□□□□ -0.97
TRAPPC1-204ENST00000571947 ARHGEF12Q9NZN5 1544 aa8.96□□□□□ -0.97
TRAPPC1-204ENST00000571947 NPM1P06748 294 aaKnown RBP eCLIP8.96□□□□□ -0.98
TRAPPC1-204ENST00000571947 TSPY4P0CV99 314 aa8.96□□□□□ -0.98
TRAPPC1-204ENST00000571947 TSPY10P0CW01 314 aa8.96□□□□□ -0.98
TRAPPC1-204ENST00000571947 KDM5DQ9BY66 1539 aa8.95□□□□□ -0.98
TRAPPC1-204ENST00000571947 UNC13BO14795 1591 aa8.95□□□□□ -0.98
TRAPPC1-204ENST00000571947 EFCAB2Q5VUJ9 269 aa8.95□□□□□ -0.98
TRAPPC1-204ENST00000571947 TIMELESSQ9UNS1 1208 aa8.95□□□□□ -0.98
TRAPPC1-204ENST00000571947 TRIM52Q96A61 297 aa8.94□□□□□ -0.98
TRAPPC1-204ENST00000571947 ANKRD50Q9ULJ7 1429 aa8.94□□□□□ -0.98
TRAPPC1-204ENST00000571947 PZPP20742 1482 aa8.94□□□□□ -0.98
TRAPPC1-204ENST00000571947 INO80Q9ULG1 1556 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC1-204ENST00000571947 MAP3K4Q9Y6R4 1608 aa8.94□□□□□ -0.98
TRAPPC1-204ENST00000571947 SIN3AQ96ST3 1273 aa8.93□□□□□ -0.98
TRAPPC1-204ENST00000571947 MPHOSPH9Q99550 1183 aa8.93□□□□□ -0.98
TRAPPC1-204ENST00000571947 FANCAO15360 1455 aa8.93□□□□□ -0.98
TRAPPC1-204ENST00000571947 DUOX2Q9NRD8 1548 aa8.93□□□□□ -0.98
TRAPPC1-204ENST00000571947 IQGAP3Q86VI3 1631 aa8.92□□□□□ -0.98
TRAPPC1-204ENST00000571947 KIF15Q9NS87 1388 aa8.92□□□□□ -0.98
TRAPPC1-204ENST00000571947 ZNF316A6NFI3 1004 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC1-204ENST00000571947 KIDINS220Q9ULH0 1771 aa8.91□□□□□ -0.98
TRAPPC1-204ENST00000571947 GLI2P10070 1586 aa8.91□□□□□ -0.98
TRAPPC1-204ENST00000571947 ZFYVE16Q7Z3T8 1539 aa8.91□□□□□ -0.98
TRAPPC1-204ENST00000571947 NEUROD1Q13562 356 aa8.91□□□□□ -0.98
TRAPPC1-204ENST00000571947 RTEL1-TNFRSF6BF6WH68 1400 aa8.9□□□□□ -0.98
TRAPPC1-204ENST00000571947 TRAPPC8Q9Y2L5 1435 aa8.9□□□□□ -0.98
TRAPPC1-204ENST00000571947 TSPOAP1O95153 1857 aa8.9□□□□□ -0.98
TRAPPC1-204ENST00000571947 KIF13AQ9H1H9 1805 aa8.9□□□□□ -0.98
TRAPPC1-204ENST00000571947 DEPDC5O75140 1603 aa8.9□□□□□ -0.99
TRAPPC1-204ENST00000571947 EIF2AK4Q9P2K8 1649 aaKnown RBP8.9□□□□□ -0.99
TRAPPC1-204ENST00000571947 ATP7AQ04656 1500 aa8.9□□□□□ -0.99
TRAPPC1-204ENST00000571947 ADGRL1O94910 1474 aa8.89□□□□□ -0.99
TRAPPC1-204ENST00000571947 RICTORQ6R327 1708 aa8.89□□□□□ -0.99
TRAPPC1-204ENST00000571947 ANKRD30BQ9BXX2 1392 aa8.88□□□□□ -0.99
TRAPPC1-204ENST00000571947 MAGI2Q86UL8 1455 aa8.88□□□□□ -0.99
TRAPPC1-204ENST00000571947 CD109Q6YHK3 1445 aa8.88□□□□□ -0.99
TRAPPC1-204ENST00000571947 ERBINQ96RT1 1412 aa8.88□□□□□ -0.99
TRAPPC1-204ENST00000571947 PPRC1Q5VV67 1664 aaKnown RBP8.88□□□□□ -0.99
TRAPPC1-204ENST00000571947 TONSLQ96HA7 1378 aa8.87□□□□□ -0.99
TRAPPC1-204ENST00000571947 KDM5CP41229 1560 aa8.87□□□□□ -0.99
TRAPPC1-204ENST00000571947 DIP2BQ9P265 1576 aa8.87□□□□□ -0.99
TRAPPC1-204ENST00000571947 FAM135AQ9P2D6 1515 aa8.87□□□□□ -0.99
TRAPPC1-204ENST00000571947 PPP1R15AO75807 674 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC1-204ENST00000571947 SLC4A1APQ9BWU0 796 aaKnown RBP8.87□□□□□ -0.99
TRAPPC1-204ENST00000571947 BCORL1Q5H9F3 1711 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms