RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 MYO5CQ9NQX4 1742 aa20.22■□□□□ 0.83
TVP23B-204ENST00000571018 DENND4BO75064 1496 aaPredicted RBP20.21■□□□□ 0.83
TVP23B-204ENST00000571018 FRMPD1Q5SYB0 1578 aa20.19■□□□□ 0.82
TVP23B-204ENST00000571018 KDM4FA0A1W2PPD8 638 aa20.18■□□□□ 0.82
TVP23B-204ENST00000571018 VPS8Q8N3P4 1428 aa20.18■□□□□ 0.82
TVP23B-204ENST00000571018 ADGRL1O94910 1474 aa20.17■□□□□ 0.82
TVP23B-204ENST00000571018 MTUS2Q5JR59 1369 aa20.16■□□□□ 0.82
TVP23B-204ENST00000571018 SCAPERQ9BY12 1400 aa20.16■□□□□ 0.82
TVP23B-204ENST00000571018 ARHGAP5Q13017 1502 aa20.16■□□□□ 0.82
TVP23B-204ENST00000571018 RICTORQ6R327 1708 aa20.15■□□□□ 0.82
TVP23B-204ENST00000571018 CDC42BPBQ9Y5S2 1711 aa20.13■□□□□ 0.81
TVP23B-204ENST00000571018 PREX2Q70Z35 1606 aa20.13■□□□□ 0.81
TVP23B-204ENST00000571018 POGZQ7Z3K3 1410 aa20.11■□□□□ 0.81
TVP23B-204ENST00000571018 ZMYM4Q5VZL5 1548 aa20.1■□□□□ 0.81
TVP23B-204ENST00000571018 EHBP1L1Q8N3D4 1523 aa20.1■□□□□ 0.81
TVP23B-204ENST00000571018 GPATCH8Q9UKJ3 1502 aaKnown RBP20.1■□□□□ 0.81
TVP23B-204ENST00000571018 CDC42BPAQ5VT25 1732 aa20.09■□□□□ 0.81
TVP23B-204ENST00000571018 MAGI2Q86UL8 1455 aa20.08■□□□□ 0.81
TVP23B-204ENST00000571018 TIAM1Q13009 1591 aa20.07■□□□□ 0.8
TVP23B-204ENST00000571018 CCNB3Q8WWL7 1395 aa20.07■□□□□ 0.8
TVP23B-204ENST00000571018 PPP4R3CPQ6ZMV5 832 aa20.05■□□□□ 0.8
TVP23B-204ENST00000571018 ARHGEF40Q8TER5 1519 aa20.05■□□□□ 0.8
TVP23B-204ENST00000571018 ZNF518AQ6AHZ1 1483 aa20.05■□□□□ 0.8
TVP23B-204ENST00000571018 YEATS2Q9ULM3 1422 aa20.03■□□□□ 0.8
TVP23B-204ENST00000571018 ABCC1P33527 1531 aa20.03■□□□□ 0.8
TVP23B-204ENST00000571018 MAP3K1Q13233 1512 aa20.03■□□□□ 0.8
TVP23B-204ENST00000571018 ZFYVE16Q7Z3T8 1539 aa20.03■□□□□ 0.8
TVP23B-204ENST00000571018 AFAP1Q8N556 730 aa20.03■□□□□ 0.8
TVP23B-204ENST00000571018 CFDP1Q9UEE9 299 aaPredicted RBP20.03■□□□□ 0.8
TVP23B-204ENST00000571018 ARHGEF12Q9NZN5 1544 aa20.02■□□□□ 0.8
TVP23B-204ENST00000571018 ZNF777Q9ULD5 760 aaPredicted RBP20.02■□□□□ 0.8
TVP23B-204ENST00000571018 KDM5CP41229 1560 aa20.01■□□□□ 0.79
TVP23B-204ENST00000571018 LRRC9Q6ZRR7 1453 aa20■□□□□ 0.79
TVP23B-204ENST00000571018 TRAPPC8Q9Y2L5 1435 aa20■□□□□ 0.79
TVP23B-204ENST00000571018 SAMD9LQ8IVG5 1584 aa20■□□□□ 0.79
TVP23B-204ENST00000571018 NCOA2Q15596 1464 aa19.99■□□□□ 0.79
TVP23B-204ENST00000571018 ITSN2Q9NZM3 1697 aa19.98■□□□□ 0.79
TVP23B-204ENST00000571018 SUPT6HQ7KZ85 1726 aaKnown RBP19.98■□□□□ 0.79
TVP23B-204ENST00000571018 KIAA1107Q9UPP5 1409 aa19.97■□□□□ 0.79
TVP23B-204ENST00000571018 KANK4Q5T7N3 995 aaPredicted RBP19.97■□□□□ 0.79
TVP23B-204ENST00000571018 PLEKHH2Q8IVE3 1493 aa19.97■□□□□ 0.79
TVP23B-204ENST00000571018 MLH3Q9UHC1 1453 aa19.97■□□□□ 0.79
TVP23B-204ENST00000571018 ARID4BQ4LE39 1312 aaPredicted RBP19.97■□□□□ 0.79
TVP23B-204ENST00000571018 ATP10AO60312 1499 aa19.96■□□□□ 0.79
TVP23B-204ENST00000571018 HNRNPMP52272 730 aaKnown RBP eCLIP19.95■□□□□ 0.786e-8■■■□□ 15.2
TVP23B-204ENST00000571018 HECW2Q9P2P5 1572 aa19.95■□□□□ 0.78
TVP23B-204ENST00000571018 SYCP2Q9BX26 1530 aa19.94■□□□□ 0.78
TVP23B-204ENST00000571018 APLP2Q06481 763 aa19.93■□□□□ 0.78
TVP23B-204ENST00000571018 MYT1LQ9UL68 1186 aa19.93■□□□□ 0.78
TVP23B-204ENST00000571018 ADAMTSL3P82987 1691 aa19.92■□□□□ 0.78
TVP23B-204ENST00000571018 BCORL1Q5H9F3 1711 aa19.92■□□□□ 0.78
TVP23B-204ENST00000571018 ZNF644Q9H582 1327 aaPredicted RBP19.92■□□□□ 0.78
TVP23B-204ENST00000571018 C9orf84Q5VXU9 1444 aa19.92■□□□□ 0.78
TVP23B-204ENST00000571018 SIGLEC1Q9BZZ2 1709 aa19.9■□□□□ 0.78
TVP23B-204ENST00000571018 DIP2CQ9Y2E4 1556 aa19.89■□□□□ 0.77
TVP23B-204ENST00000571018 SPAG9O60271 1321 aaKnown RBP19.88■□□□□ 0.77
TVP23B-204ENST00000571018 MBD5Q9P267 1494 aa19.87■□□□□ 0.77
TVP23B-204ENST00000571018 KIDINS220Q9ULH0 1771 aa19.87■□□□□ 0.77
TVP23B-204ENST00000571018 ABCA6Q8N139 1617 aa19.87■□□□□ 0.77
TVP23B-204ENST00000571018 REREQ9P2R6 1566 aa19.87■□□□□ 0.77
TVP23B-204ENST00000571018 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
TVP23B-204ENST00000571018 PTPRMP28827 1452 aa19.84■□□□□ 0.77
TVP23B-204ENST00000571018 CAMSAP2Q08AD1 1489 aa19.84■□□□□ 0.77
TVP23B-204ENST00000571018 MADDQ8WXG6 1647 aa19.84■□□□□ 0.77
TVP23B-204ENST00000571018 MLECQ14165 292 aa19.82■□□□□ 0.76
TVP23B-204ENST00000571018 RSPH4AQ5TD94 716 aa19.82■□□□□ 0.76
TVP23B-204ENST00000571018 MYOM3Q5VTT5 1437 aa19.82■□□□□ 0.76
TVP23B-204ENST00000571018 MIA2Q96PC5 1412 aa19.82■□□□□ 0.76
TVP23B-204ENST00000571018 ATP7AQ04656 1500 aa19.81■□□□□ 0.76
TVP23B-204ENST00000571018 INO80Q9ULG1 1556 aaPredicted RBP19.81■□□□□ 0.76
TVP23B-204ENST00000571018 AGLP35573 1532 aa19.81■□□□□ 0.76
TVP23B-204ENST00000571018 CCDC141Q6ZP82 1450 aa19.79■□□□□ 0.76
TVP23B-204ENST00000571018 RTEL1-TNFRSF6BF6WH68 1400 aa19.78■□□□□ 0.76
TVP23B-204ENST00000571018 RIMS1Q86UR5 1692 aaKnown RBP19.76■□□□□ 0.75
TVP23B-204ENST00000571018 ARHGEF5Q12774 1597 aa19.76■□□□□ 0.75
TVP23B-204ENST00000571018 A2MP01023 1474 aa19.74■□□□□ 0.75
TVP23B-204ENST00000571018 FER1L4A9Z1Z3 1794 aa19.72■□□□□ 0.75
TVP23B-204ENST00000571018 TSPY4P0CV99 314 aa19.72■□□□□ 0.75
TVP23B-204ENST00000571018 TSPY10P0CW01 314 aa19.72■□□□□ 0.75
TVP23B-204ENST00000571018 PLXNC1O60486 1568 aa19.71■□□□□ 0.75
TVP23B-204ENST00000571018 ADGBQ8N7X0 1667 aa19.7■□□□□ 0.74
TVP23B-204ENST00000571018 FGD6Q6ZV73 1430 aa19.69■□□□□ 0.74
TVP23B-204ENST00000571018 DHX29Q7Z478 1369 aaKnown RBP19.69■□□□□ 0.74
TVP23B-204ENST00000571018 PTPN23Q9H3S7 1636 aa19.67■□□□□ 0.74
TVP23B-204ENST00000571018 MAST1Q9Y2H9 1570 aa19.66■□□□□ 0.74
TVP23B-204ENST00000571018 ESF1Q9H501 851 aaKnown RBP19.66■□□□□ 0.74
TVP23B-204ENST00000571018 TCOF1Q13428 1488 aaKnown RBP19.66■□□□□ 0.74
TVP23B-204ENST00000571018 KCNA4P22459 653 aa19.65■□□□□ 0.74
TVP23B-204ENST00000571018 CNTLNQ9NXG0 1405 aa19.64■□□□□ 0.73
TVP23B-204ENST00000571018 CEBPAP49715 358 aaPredicted RBP19.63■□□□□ 0.73
TVP23B-204ENST00000571018 MAPK8IP2Q13387 824 aaPredicted RBP19.63■□□□□ 0.73
TVP23B-204ENST00000571018 ABCC5O15440 1437 aa19.62■□□□□ 0.73
TVP23B-204ENST00000571018 GGT6Q6P531 493 aa19.62■□□□□ 0.73
TVP23B-204ENST00000571018 KIF3BO15066 747 aa19.6■□□□□ 0.73
TVP23B-204ENST00000571018 DAPK1P53355 1430 aa19.59■□□□□ 0.73
TVP23B-204ENST00000571018 LMTK3Q96Q04 1460 aa19.59■□□□□ 0.73
TVP23B-204ENST00000571018 SHANK2Q9UPX8 1470 aa19.59■□□□□ 0.73
TVP23B-204ENST00000571018 DNMT1P26358 1616 aaKnown RBP19.58■□□□□ 0.73
TVP23B-204ENST00000571018 C3P01024 1663 aa19.57■□□□□ 0.72
TVP23B-204ENST00000571018 ZMYM3Q14202 1370 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms