RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 CASKIN1Q8WXD9 1431 aa29.13■■■□□ 2.25
SPNS2-203ENST00000570979 KIF14Q15058 1648 aa29.12■■■□□ 2.25
SPNS2-203ENST00000570979 CDK11AQ9UQ88 783 aaPredicted RBP29.11■■■□□ 2.25
SPNS2-203ENST00000570979 TROQ12816 1431 aaPredicted RBP29.1■■■□□ 2.25
SPNS2-203ENST00000570979 LRRC9Q6ZRR7 1453 aa29.09■■■□□ 2.25
SPNS2-203ENST00000570979 PLCH2O75038 1416 aa29.08■■■□□ 2.25
SPNS2-203ENST00000570979 CCNB3Q8WWL7 1395 aa29.08■■■□□ 2.25
SPNS2-203ENST00000570979 DENND4BO75064 1496 aaPredicted RBP29.07■■■□□ 2.24
SPNS2-203ENST00000570979 CFAP74Q9C0B2 1584 aa29.07■■■□□ 2.24
SPNS2-203ENST00000570979 CLSPNQ9HAW4 1339 aa29.06■■■□□ 2.24
SPNS2-203ENST00000570979 RICTORQ6R327 1708 aa29.06■■■□□ 2.24
SPNS2-203ENST00000570979 CCDC18Q5T9S5 1454 aa29.02■■■□□ 2.24
SPNS2-203ENST00000570979 MYO5CQ9NQX4 1742 aa29.01■■■□□ 2.23
SPNS2-203ENST00000570979 SCAPERQ9BY12 1400 aa28.97■■■□□ 2.23
SPNS2-203ENST00000570979 EFCAB2Q5VUJ9 269 aa28.96■■■□□ 2.23
SPNS2-203ENST00000570979 ARHGEF40Q8TER5 1519 aa28.94■■■□□ 2.22
SPNS2-203ENST00000570979 ZMYM4Q5VZL5 1548 aa28.93■■■□□ 2.22
SPNS2-203ENST00000570979 POGZQ7Z3K3 1410 aa28.92■■■□□ 2.22
SPNS2-203ENST00000570979 MYT1Q01538 1121 aa28.9■■■□□ 2.22
SPNS2-203ENST00000570979 ARHGAP5Q13017 1502 aa28.9■■■□□ 2.22
SPNS2-203ENST00000570979 YEATS2Q9ULM3 1422 aa28.9■■■□□ 2.22
SPNS2-203ENST00000570979 CDC42BPBQ9Y5S2 1711 aa28.89■■■□□ 2.22
SPNS2-203ENST00000570979 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.89■■■□□ 2.21
SPNS2-203ENST00000570979 ADAMTSL3P82987 1691 aa28.86■■■□□ 2.21
SPNS2-203ENST00000570979 ARID4BQ4LE39 1312 aaPredicted RBP28.86■■■□□ 2.21
SPNS2-203ENST00000570979 ZFYVE16Q7Z3T8 1539 aa28.86■■■□□ 2.21
SPNS2-203ENST00000570979 BCORL1Q5H9F3 1711 aa28.84■■■□□ 2.21
SPNS2-203ENST00000570979 PREX2Q70Z35 1606 aa28.84■■■□□ 2.21
SPNS2-203ENST00000570979 SIGLEC1Q9BZZ2 1709 aa28.83■■■□□ 2.21
SPNS2-203ENST00000570979 MAGI2Q86UL8 1455 aa28.82■■■□□ 2.2
SPNS2-203ENST00000570979 CDC42BPAQ5VT25 1732 aa28.81■■■□□ 2.2
SPNS2-203ENST00000570979 AFAP1Q8N556 730 aa28.8■■■□□ 2.2
SPNS2-203ENST00000570979 MTUS2Q5JR59 1369 aa28.77■■■□□ 2.2
SPNS2-203ENST00000570979 ARHGEF12Q9NZN5 1544 aa28.77■■■□□ 2.2
SPNS2-203ENST00000570979 ZNF518AQ6AHZ1 1483 aa28.76■■■□□ 2.19
SPNS2-203ENST00000570979 MADDQ8WXG6 1647 aa28.76■■■□□ 2.19
SPNS2-203ENST00000570979 PTPRMP28827 1452 aa28.75■■■□□ 2.19
SPNS2-203ENST00000570979 KDM5CP41229 1560 aa28.74■■■□□ 2.19
SPNS2-203ENST00000570979 ABCC1P33527 1531 aa28.74■■■□□ 2.19
SPNS2-203ENST00000570979 GPATCH8Q9UKJ3 1502 aaKnown RBP28.73■■■□□ 2.19
SPNS2-203ENST00000570979 TRAPPC8Q9Y2L5 1435 aa28.73■■■□□ 2.19
SPNS2-203ENST00000570979 HECW2Q9P2P5 1572 aa28.73■■■□□ 2.19
SPNS2-203ENST00000570979 DHX57Q6P158 1386 aaKnown RBP28.72■■■□□ 2.19
SPNS2-203ENST00000570979 ATP10AO60312 1499 aa28.71■■■□□ 2.19
SPNS2-203ENST00000570979 EHBP1L1Q8N3D4 1523 aa28.71■■■□□ 2.19
SPNS2-203ENST00000570979 ITSN2Q9NZM3 1697 aa28.69■■■□□ 2.18
SPNS2-203ENST00000570979 ZNF777Q9ULD5 760 aaPredicted RBP28.67■■■□□ 2.18
SPNS2-203ENST00000570979 MLECQ14165 292 aa28.67■■■□□ 2.18
SPNS2-203ENST00000570979 SAMD9LQ8IVG5 1584 aa28.67■■■□□ 2.18
SPNS2-203ENST00000570979 C9orf84Q5VXU9 1444 aa28.66■■■□□ 2.18
SPNS2-203ENST00000570979 SETD5Q9C0A6 1442 aa28.66■■■□□ 2.18
SPNS2-203ENST00000570979 RIMS1Q86UR5 1692 aaKnown RBP28.66■■■□□ 2.18
SPNS2-203ENST00000570979 SUPT6HQ7KZ85 1726 aaKnown RBP28.65■■■□□ 2.18
SPNS2-203ENST00000570979 FAM50AQ14320 339 aaKnown RBP28.65■■■□□ 2.18
SPNS2-203ENST00000570979 DIP2CQ9Y2E4 1556 aa28.63■■■□□ 2.17
SPNS2-203ENST00000570979 MYT1LQ9UL68 1186 aa28.63■■■□□ 2.17
SPNS2-203ENST00000570979 ZNF316A6NFI3 1004 aaPredicted RBP28.62■■■□□ 2.17
SPNS2-203ENST00000570979 MLH3Q9UHC1 1453 aa28.62■■■□□ 2.17
SPNS2-203ENST00000570979 FGD6Q6ZV73 1430 aa28.62■■■□□ 2.17
SPNS2-203ENST00000570979 ABCA6Q8N139 1617 aa28.61■■■□□ 2.17
SPNS2-203ENST00000570979 SYCP2Q9BX26 1530 aa28.6■■■□□ 2.17
SPNS2-203ENST00000570979 CFDP1Q9UEE9 299 aaPredicted RBP28.6■■■□□ 2.17
SPNS2-203ENST00000570979 ITGAEP38570 1179 aa28.6■■■□□ 2.17
SPNS2-203ENST00000570979 HNRNPMP52272 730 aaKnown RBP eCLIP28.6■■■□□ 2.17
SPNS2-203ENST00000570979 KIDINS220Q9ULH0 1771 aa28.57■■■□□ 2.16
SPNS2-203ENST00000570979 RAB3GAP2Q9H2M9 1393 aa28.57■■■□□ 2.16
SPNS2-203ENST00000570979 NCOA2Q15596 1464 aa28.56■■■□□ 2.16
SPNS2-203ENST00000570979 MYOM3Q5VTT5 1437 aa28.56■■■□□ 2.16
SPNS2-203ENST00000570979 FER1L4A9Z1Z3 1794 aa28.55■■■□□ 2.16
SPNS2-203ENST00000570979 PLPPR3Q6T4P5 718 aa28.55■■■□□ 2.16
SPNS2-203ENST00000570979 ZNF644Q9H582 1327 aaPredicted RBP28.54■■■□□ 2.16
SPNS2-203ENST00000570979 KIAA1107Q9UPP5 1409 aa28.52■■■□□ 2.16
SPNS2-203ENST00000570979 REREQ9P2R6 1566 aa28.52■■■□□ 2.16
SPNS2-203ENST00000570979 DIEXFQ68CQ4 756 aaKnown RBP28.52■■■□□ 2.16
SPNS2-203ENST00000570979 PLEKHH2Q8IVE3 1493 aa28.49■■■□□ 2.15
SPNS2-203ENST00000570979 SPAG9O60271 1321 aaKnown RBP28.47■■■□□ 2.15
SPNS2-203ENST00000570979 LMTK3Q96Q04 1460 aa28.44■■■□□ 2.14
SPNS2-203ENST00000570979 ACIN1Q9UKV3 1341 aaKnown RBP28.44■■■□□ 2.14
SPNS2-203ENST00000570979 AGLP35573 1532 aa28.44■■■□□ 2.14
SPNS2-203ENST00000570979 MIA2Q96PC5 1412 aa28.44■■■□□ 2.14
SPNS2-203ENST00000570979 MBD5Q9P267 1494 aa28.43■■■□□ 2.14
SPNS2-203ENST00000570979 ATP7AQ04656 1500 aa28.42■■■□□ 2.14
SPNS2-203ENST00000570979 CEBPAP49715 358 aaPredicted RBP28.42■■■□□ 2.14
SPNS2-203ENST00000570979 INO80Q9ULG1 1556 aaPredicted RBP28.41■■■□□ 2.14
SPNS2-203ENST00000570979 TIMELESSQ9UNS1 1208 aa28.41■■■□□ 2.14
SPNS2-203ENST00000570979 TCOF1Q13428 1488 aaKnown RBP28.39■■■□□ 2.14
SPNS2-203ENST00000570979 PTPN23Q9H3S7 1636 aa28.38■■■□□ 2.13
SPNS2-203ENST00000570979 HFM1A2PYH4 1435 aa28.36■■■□□ 2.13
SPNS2-203ENST00000570979 CAMSAP2Q08AD1 1489 aa28.34■■■□□ 2.13
SPNS2-203ENST00000570979 HSPA2P54652 639 aa28.34■■■□□ 2.13
SPNS2-203ENST00000570979 A2MP01023 1474 aa28.31■■■□□ 2.12
SPNS2-203ENST00000570979 PLXNC1O60486 1568 aa28.31■■■□□ 2.12
SPNS2-203ENST00000570979 C3P01024 1663 aa28.27■■■□□ 2.12
SPNS2-203ENST00000570979 CCDC141Q6ZP82 1450 aa28.26■■■□□ 2.12
SPNS2-203ENST00000570979 RTEL1-TNFRSF6BF6WH68 1400 aa28.26■■■□□ 2.11
SPNS2-203ENST00000570979 ADGBQ8N7X0 1667 aa28.25■■■□□ 2.11
SPNS2-203ENST00000570979 ESF1Q9H501 851 aaKnown RBP28.24■■■□□ 2.11
SPNS2-203ENST00000570979 PREX1Q8TCU6 1659 aa28.22■■■□□ 2.11
SPNS2-203ENST00000570979 CNTLNQ9NXG0 1405 aa28.21■■■□□ 2.11
SPNS2-203ENST00000570979 ARHGEF5Q12774 1597 aa28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms