RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 SPDYE6P0CI01 402 aa14.92□□□□□ -0.02
RBFOX1-220ENST00000570188 SPDYE2Q495Y8 402 aa14.92□□□□□ -0.02
RBFOX1-220ENST00000570188 EPRSP07814 1512 aaKnown RBP14.9□□□□□ -0.02
RBFOX1-220ENST00000570188 EHBP1L1Q8N3D4 1523 aa14.9□□□□□ -0.02
RBFOX1-220ENST00000570188 ABCA8O94911 1581 aa14.9□□□□□ -0.02
RBFOX1-220ENST00000570188 ERCC6L2Q5T890 1561 aa14.9□□□□□ -0.02
RBFOX1-220ENST00000570188 SUPT6HQ7KZ85 1726 aaKnown RBP14.89□□□□□ -0.03
RBFOX1-220ENST00000570188 CDK13Q14004 1512 aaKnown RBP14.89□□□□□ -0.03
RBFOX1-220ENST00000570188 NUP153P49790 1475 aaKnown RBP14.88□□□□□ -0.03
RBFOX1-220ENST00000570188 PLB1Q6P1J6 1458 aa14.87□□□□□ -0.03
RBFOX1-220ENST00000570188 KLHL34Q8N239 644 aa14.86□□□□□ -0.03
RBFOX1-220ENST00000570188 SPOCK2Q92563 424 aa14.86□□□□□ -0.03
RBFOX1-220ENST00000570188 STAG3Q9UJ98 1225 aa14.85□□□□□ -0.03
RBFOX1-220ENST00000570188 MAGI3Q5TCQ9 1506 aa14.85□□□□□ -0.03
RBFOX1-220ENST00000570188 MTUS2Q5JR59 1369 aa14.85□□□□□ -0.03
RBFOX1-220ENST00000570188 PTPRGP23470 1445 aa14.83□□□□□ -0.04
RBFOX1-220ENST00000570188 RRBP1Q9P2E9 1410 aaKnown RBP14.81□□□□□ -0.04
RBFOX1-220ENST00000570188 ADCY10Q96PN6 1610 aa14.79□□□□□ -0.04
RBFOX1-220ENST00000570188 NCOA2Q15596 1464 aa14.78□□□□□ -0.04
RBFOX1-220ENST00000570188 PHLDB1Q86UU1 1377 aa14.78□□□□□ -0.04
RBFOX1-220ENST00000570188 ARID3CA6NKF2 412 aa14.78□□□□□ -0.04
RBFOX1-220ENST00000570188 ARHGEF11O15085 1522 aa14.77□□□□□ -0.04
RBFOX1-220ENST00000570188 ABCC2Q92887 1545 aa14.77□□□□□ -0.04
RBFOX1-220ENST00000570188 PLCD3Q8N3E9 789 aa14.77□□□□□ -0.05
RBFOX1-220ENST00000570188 UACAQ9BZF9 1416 aa14.76□□□□□ -0.05
RBFOX1-220ENST00000570188 CCNB3Q8WWL7 1395 aa14.75□□□□□ -0.05
RBFOX1-220ENST00000570188 HAP1P54257 671 aaPredicted RBP14.74□□□□□ -0.05
RBFOX1-220ENST00000570188 ITSN2Q9NZM3 1697 aa14.74□□□□□ -0.05
RBFOX1-220ENST00000570188 ECM2O94769 699 aaPredicted RBP14.73□□□□□ -0.05
RBFOX1-220ENST00000570188 ATP10BO94823 1461 aa14.73□□□□□ -0.05
RBFOX1-220ENST00000570188 KIF14Q15058 1648 aa14.73□□□□□ -0.05
RBFOX1-220ENST00000570188 ZCCHC11Q5TAX3 1644 aaKnown RBP14.73□□□□□ -0.05
RBFOX1-220ENST00000570188 CDK11AQ9UQ88 783 aaPredicted RBP14.72□□□□□ -0.05
RBFOX1-220ENST00000570188 TROQ12816 1431 aaPredicted RBP14.72□□□□□ -0.05
RBFOX1-220ENST00000570188 MYOM3Q5VTT5 1437 aa14.72□□□□□ -0.05
RBFOX1-220ENST00000570188 UHRF1BP1LA0JNW5 1464 aa14.71□□□□□ -0.05
RBFOX1-220ENST00000570188 PTPN23Q9H3S7 1636 aa14.71□□□□□ -0.05
RBFOX1-220ENST00000570188 FGD6Q6ZV73 1430 aa14.71□□□□□ -0.05
RBFOX1-220ENST00000570188 MIER1Q8N108 512 aa14.69□□□□□ -0.06
RBFOX1-220ENST00000570188 CDC42BPAQ5VT25 1732 aa14.68□□□□□ -0.06
RBFOX1-220ENST00000570188 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.65□□□□□ -0.06
RBFOX1-220ENST00000570188 KDM5BQ9UGL1 1544 aa14.65□□□□□ -0.06
RBFOX1-220ENST00000570188 FAM50AQ14320 339 aaKnown RBP14.64□□□□□ -0.07
RBFOX1-220ENST00000570188 TCOF1Q13428 1488 aaKnown RBP14.63□□□□□ -0.07
RBFOX1-220ENST00000570188 PLEKHD1A6NEE1 506 aa14.62□□□□□ -0.07
RBFOX1-220ENST00000570188 MIA2Q96PC5 1412 aa14.62□□□□□ -0.07
RBFOX1-220ENST00000570188 MYO5CQ9NQX4 1742 aa14.61□□□□□ -0.07
RBFOX1-220ENST00000570188 RIMBP3CA6NJZ7 1639 aa14.61□□□□□ -0.07
RBFOX1-220ENST00000570188 RIMBP3BA6NNM3 1639 aa14.61□□□□□ -0.07
RBFOX1-220ENST00000570188 PREX2Q70Z35 1606 aa14.61□□□□□ -0.07
RBFOX1-220ENST00000570188 RIMBP3Q9UFD9 1639 aa14.61□□□□□ -0.07
RBFOX1-220ENST00000570188 ABCC10Q5T3U5 1492 aa14.6□□□□□ -0.07
RBFOX1-220ENST00000570188 TTC37Q6PGP7 1564 aa14.6□□□□□ -0.07
RBFOX1-220ENST00000570188 CDC42BPBQ9Y5S2 1711 aa14.59□□□□□ -0.07
RBFOX1-220ENST00000570188 RGL2O15211 777 aa14.59□□□□□ -0.07
RBFOX1-220ENST00000570188 NPM1P06748 294 aaKnown RBP eCLIP14.59□□□□□ -0.07
RBFOX1-220ENST00000570188 ITGAEP38570 1179 aa14.59□□□□□ -0.07
RBFOX1-220ENST00000570188 CACNB1Q02641 598 aaPredicted RBP14.58□□□□□ -0.08
RBFOX1-220ENST00000570188 GPATCH8Q9UKJ3 1502 aaKnown RBP14.57□□□□□ -0.08
RBFOX1-220ENST00000570188 DNMT1P26358 1616 aaKnown RBP14.57□□□□□ -0.08
RBFOX1-220ENST00000570188 BBXQ8WY36 941 aaPredicted RBP14.57□□□□□ -0.08
RBFOX1-220ENST00000570188 CROCC2H7BZ55 1655 aa14.57□□□□□ -0.08
RBFOX1-220ENST00000570188 HRCP23327 699 aa14.56□□□□□ -0.08
RBFOX1-220ENST00000570188 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.56□□□□□ -0.08
RBFOX1-220ENST00000570188 CAMSAP2Q08AD1 1489 aa14.55□□□□□ -0.08
RBFOX1-220ENST00000570188 GCC2Q8IWJ2 1684 aa14.55□□□□□ -0.08
RBFOX1-220ENST00000570188 ADGBQ8N7X0 1667 aa14.55□□□□□ -0.08
RBFOX1-220ENST00000570188 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.53□□□□□ -0.08
RBFOX1-220ENST00000570188 WDR7Q9Y4E6 1490 aa14.52□□□□□ -0.08
RBFOX1-220ENST00000570188 PLEKHG5O94827 1062 aa14.52□□□□□ -0.09
RBFOX1-220ENST00000570188 ZBTB47Q9UFB7 747 aaPredicted RBP14.52□□□□□ -0.09
RBFOX1-220ENST00000570188 CIZ1Q9ULV3 898 aaPredicted RBP14.51□□□□□ -0.09
RBFOX1-220ENST00000570188 CCER1Q8TC90 406 aaPredicted RBP14.5□□□□□ -0.09
RBFOX1-220ENST00000570188 CFDP1Q9UEE9 299 aaPredicted RBP14.5□□□□□ -0.09
RBFOX1-220ENST00000570188 SAMD9LQ8IVG5 1584 aa14.5□□□□□ -0.09
RBFOX1-220ENST00000570188 PTPRKQ15262 1439 aa14.49□□□□□ -0.09
RBFOX1-220ENST00000570188 VSIG10Q8N0Z9 540 aa14.49□□□□□ -0.09
RBFOX1-220ENST00000570188 ARHGAP5Q13017 1502 aa14.49□□□□□ -0.09
RBFOX1-220ENST00000570188 DAPK1P53355 1430 aa14.49□□□□□ -0.09
RBFOX1-220ENST00000570188 SETD5Q9C0A6 1442 aa14.49□□□□□ -0.09
RBFOX1-220ENST00000570188 ABCA9Q8IUA7 1624 aa14.48□□□□□ -0.09
RBFOX1-220ENST00000570188 ASXL2Q76L83 1435 aa14.48□□□□□ -0.09
RBFOX1-220ENST00000570188 PAXIP1Q6ZW49 1069 aaPredicted RBP14.47□□□□□ -0.09
RBFOX1-220ENST00000570188 RAB3GAP2Q9H2M9 1393 aa14.47□□□□□ -0.09
RBFOX1-220ENST00000570188 KCNH8Q96L42 1107 aa14.46□□□□□ -0.09
RBFOX1-220ENST00000570188 ARHGEF5Q12774 1597 aa14.46□□□□□ -0.09
RBFOX1-220ENST00000570188 ZNF644Q9H582 1327 aaPredicted RBP14.45□□□□□ -0.1
RBFOX1-220ENST00000570188 ABCC5O15440 1437 aa14.45□□□□□ -0.1
RBFOX1-220ENST00000570188 AKNAQ7Z591 1439 aa14.45□□□□□ -0.1
RBFOX1-220ENST00000570188 ZNF777Q9ULD5 760 aaPredicted RBP14.45□□□□□ -0.1
RBFOX1-220ENST00000570188 HFM1A2PYH4 1435 aa14.44□□□□□ -0.1
RBFOX1-220ENST00000570188 ZEB1P37275 1124 aaPredicted RBP14.44□□□□□ -0.1
RBFOX1-220ENST00000570188 ARAP3Q8WWN8 1544 aa14.44□□□□□ -0.1
RBFOX1-220ENST00000570188 CFAP44Q96MT7 982 aa14.43□□□□□ -0.1
RBFOX1-220ENST00000570188 MAPKBP1O60336 1514 aa14.42□□□□□ -0.1
RBFOX1-220ENST00000570188 SYCP2Q9BX26 1530 aa14.42□□□□□ -0.1
RBFOX1-220ENST00000570188 SHANK2Q9UPX8 1470 aa14.42□□□□□ -0.1
RBFOX1-220ENST00000570188 PLCH2O75038 1416 aa14.41□□□□□ -0.1
RBFOX1-220ENST00000570188 NAIPQ13075 1403 aa14.41□□□□□ -0.1
RBFOX1-220ENST00000570188 ABCC1P33527 1531 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms