RNA–Protein interactions for RNA: ENST00000570138.5

EDC3-218, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-218ENST00000570138 CHIC2Q9UKJ5 165 aa13.62□□□□□ -0.23
EDC3-218ENST00000570138 ASXL2Q76L83 1435 aa13.62□□□□□ -0.23
EDC3-218ENST00000570138 WDR7Q9Y4E6 1490 aa13.61□□□□□ -0.23
EDC3-218ENST00000570138 ABCC5O15440 1437 aa13.6□□□□□ -0.23
EDC3-218ENST00000570138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.59□□□□□ -0.23
EDC3-218ENST00000570138 RAB3GAP2Q9H2M9 1393 aa13.59□□□□□ -0.23
EDC3-218ENST00000570138 HNRNPMP52272 730 aaKnown RBP eCLIP13.59□□□□□ -0.23
EDC3-218ENST00000570138 EFCAB2Q5VUJ9 269 aa13.59□□□□□ -0.23
EDC3-218ENST00000570138 RRP7BPQ9NSQ0 103 aa13.59□□□□□ -0.23
EDC3-218ENST00000570138 PLCH2O75038 1416 aa13.58□□□□□ -0.24
EDC3-218ENST00000570138 CAMSAP2Q08AD1 1489 aa13.58□□□□□ -0.24
EDC3-218ENST00000570138 DAPK1P53355 1430 aa13.57□□□□□ -0.24
EDC3-218ENST00000570138 RSPH4AQ5TD94 716 aa13.56□□□□□ -0.24
EDC3-218ENST00000570138 ITSN2Q9NZM3 1697 aa13.56□□□□□ -0.24
EDC3-218ENST00000570138 HFM1A2PYH4 1435 aa13.55□□□□□ -0.24
EDC3-218ENST00000570138 TTC37Q6PGP7 1564 aa13.54□□□□□ -0.24
EDC3-218ENST00000570138 ROCK1Q13464 1354 aa13.54□□□□□ -0.24
EDC3-218ENST00000570138 DHX57Q6P158 1386 aaKnown RBP13.54□□□□□ -0.24
EDC3-218ENST00000570138 NAIPQ13075 1403 aa13.54□□□□□ -0.24
EDC3-218ENST00000570138 AKNAQ7Z591 1439 aa13.54□□□□□ -0.24
EDC3-218ENST00000570138 CDC42BPAQ5VT25 1732 aa13.53□□□□□ -0.24
EDC3-218ENST00000570138 TSPY4P0CV99 314 aa13.53□□□□□ -0.24
EDC3-218ENST00000570138 TSPY10P0CW01 314 aa13.53□□□□□ -0.24
EDC3-218ENST00000570138 ARHGAP5Q13017 1502 aa13.53□□□□□ -0.24
EDC3-218ENST00000570138 MBD5Q9P267 1494 aa13.52□□□□□ -0.25
EDC3-218ENST00000570138 KIAA1107Q9UPP5 1409 aa13.51□□□□□ -0.25
EDC3-218ENST00000570138 KIF13AQ9H1H9 1805 aa13.5□□□□□ -0.25
EDC3-218ENST00000570138 DNMT1P26358 1616 aaKnown RBP13.5□□□□□ -0.25
EDC3-218ENST00000570138 PREX2Q70Z35 1606 aa13.5□□□□□ -0.25
EDC3-218ENST00000570138 PLEKHH2Q8IVE3 1493 aa13.49□□□□□ -0.25
EDC3-218ENST00000570138 CDC42BPBQ9Y5S2 1711 aa13.49□□□□□ -0.25
EDC3-218ENST00000570138 SAMD9LQ8IVG5 1584 aa13.49□□□□□ -0.25
EDC3-218ENST00000570138 NCOA1Q15788 1441 aa13.48□□□□□ -0.25
EDC3-218ENST00000570138 ANKRD30AQ9BXX3 1397 aa13.48□□□□□ -0.25
EDC3-218ENST00000570138 CLSPNQ9HAW4 1339 aa13.47□□□□□ -0.25
EDC3-218ENST00000570138 ARAP3Q8WWN8 1544 aa13.47□□□□□ -0.25
EDC3-218ENST00000570138 C9orf84Q5VXU9 1444 aa13.47□□□□□ -0.25
EDC3-218ENST00000570138 CD109Q6YHK3 1445 aa13.47□□□□□ -0.25
EDC3-218ENST00000570138 ABCA9Q8IUA7 1624 aa13.46□□□□□ -0.25
EDC3-218ENST00000570138 ARHGEF5Q12774 1597 aa13.46□□□□□ -0.25
EDC3-218ENST00000570138 ARHGEF12Q9NZN5 1544 aa13.46□□□□□ -0.25
EDC3-218ENST00000570138 ADGRL2O95490 1459 aa13.46□□□□□ -0.25
EDC3-218ENST00000570138 ACIN1Q9UKV3 1341 aaKnown RBP13.45□□□□□ -0.26
EDC3-218ENST00000570138 MAPKBP1O60336 1514 aa13.45□□□□□ -0.26
EDC3-218ENST00000570138 MYO5CQ9NQX4 1742 aa13.45□□□□□ -0.26
EDC3-218ENST00000570138 CCDC141Q6ZP82 1450 aa13.45□□□□□ -0.26
EDC3-218ENST00000570138 TRIM52Q96A61 297 aa13.45□□□□□ -0.26
EDC3-218ENST00000570138 SHANK2Q9UPX8 1470 aa13.44□□□□□ -0.26
EDC3-218ENST00000570138 FANCAO15360 1455 aa13.43□□□□□ -0.26
EDC3-218ENST00000570138 FAM69CQ0P6D2 419 aa13.43□□□□□ -0.26
EDC3-218ENST00000570138 AFAP1Q8N556 730 aa13.43□□□□□ -0.26
EDC3-218ENST00000570138 TRAPPC8Q9Y2L5 1435 aa13.43□□□□□ -0.26
EDC3-218ENST00000570138 SYCP2Q9BX26 1530 aa13.43□□□□□ -0.26
EDC3-218ENST00000570138 SCAPERQ9BY12 1400 aa13.41□□□□□ -0.26
EDC3-218ENST00000570138 SPAG9O60271 1321 aaKnown RBP13.4□□□□□ -0.26
EDC3-218ENST00000570138 KIF15Q9NS87 1388 aa13.4□□□□□ -0.26
EDC3-218ENST00000570138 ABCC1P33527 1531 aa13.39□□□□□ -0.27
EDC3-218ENST00000570138 KDM4FA0A1W2PPD8 638 aa13.39□□□□□ -0.27
EDC3-218ENST00000570138 MPHOSPH9Q99550 1183 aa13.39□□□□□ -0.27
EDC3-218ENST00000570138 HECW2Q9P2P5 1572 aa13.39□□□□□ -0.27
EDC3-218ENST00000570138 KDM6BO15054 1643 aa13.39□□□□□ -0.27
EDC3-218ENST00000570138 ANKRD50Q9ULJ7 1429 aa13.39□□□□□ -0.27
EDC3-218ENST00000570138 GCC2Q8IWJ2 1684 aa13.37□□□□□ -0.27
EDC3-218ENST00000570138 GLI2P10070 1586 aa13.37□□□□□ -0.27
EDC3-218ENST00000570138 ADGRL1O94910 1474 aa13.37□□□□□ -0.27
EDC3-218ENST00000570138 CROCC2H7BZ55 1655 aa13.37□□□□□ -0.27
EDC3-218ENST00000570138 MAST1Q9Y2H9 1570 aa13.37□□□□□ -0.27
EDC3-218ENST00000570138 SIN3AQ96ST3 1273 aa13.36□□□□□ -0.27
EDC3-218ENST00000570138 RTEL1-TNFRSF6BF6WH68 1400 aa13.36□□□□□ -0.27
EDC3-218ENST00000570138 MYT1LQ9UL68 1186 aa13.35□□□□□ -0.27
EDC3-218ENST00000570138 NEO1Q92859 1461 aa13.35□□□□□ -0.27
EDC3-218ENST00000570138 ADGBQ8N7X0 1667 aa13.34□□□□□ -0.27
EDC3-218ENST00000570138 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
EDC3-218ENST00000570138 NEUROD1Q13562 356 aa13.33□□□□□ -0.28
EDC3-218ENST00000570138 NUP155O75694 1391 aa13.32□□□□□ -0.28
EDC3-218ENST00000570138 RAPGEF3O95398 923 aa13.31□□□□□ -0.28
EDC3-218ENST00000570138 DIP2BQ9P265 1576 aa13.31□□□□□ -0.28
EDC3-218ENST00000570138 DENND4BO75064 1496 aaPredicted RBP13.3□□□□□ -0.28
EDC3-218ENST00000570138 LMTK3Q96Q04 1460 aa13.3□□□□□ -0.28
EDC3-218ENST00000570138 FOXD1Q16676 465 aa13.3□□□□□ -0.28
EDC3-218ENST00000570138 MAP3K4Q9Y6R4 1608 aa13.3□□□□□ -0.28
EDC3-218ENST00000570138 PKD2Q13563 968 aa13.29□□□□□ -0.28
EDC3-218ENST00000570138 POGZQ7Z3K3 1410 aa13.29□□□□□ -0.28
EDC3-218ENST00000570138 PZPP20742 1482 aa13.29□□□□□ -0.28
EDC3-218ENST00000570138 ZNF518AQ6AHZ1 1483 aa13.29□□□□□ -0.28
EDC3-218ENST00000570138 DUOX2Q9NRD8 1548 aa13.29□□□□□ -0.28
EDC3-218ENST00000570138 CFAP74Q9C0B2 1584 aa13.28□□□□□ -0.28
EDC3-218ENST00000570138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.283e-7■■□□□ 13.1
EDC3-218ENST00000570138 TIMELESSQ9UNS1 1208 aa13.28□□□□□ -0.28
EDC3-218ENST00000570138 PLXNC1O60486 1568 aa13.28□□□□□ -0.28
EDC3-218ENST00000570138 DHX29Q7Z478 1369 aaKnown RBP13.27□□□□□ -0.29
EDC3-218ENST00000570138 FBXO41Q8TF61 875 aa13.26□□□□□ -0.29
EDC3-218ENST00000570138 ERBINQ96RT1 1412 aa13.26□□□□□ -0.29
EDC3-218ENST00000570138 ANKRD30BQ9BXX2 1392 aa13.26□□□□□ -0.29
EDC3-218ENST00000570138 ATP7AQ04656 1500 aa13.25□□□□□ -0.29
EDC3-218ENST00000570138 ZFYVE16Q7Z3T8 1539 aa13.25□□□□□ -0.29
EDC3-218ENST00000570138 MLH3Q9UHC1 1453 aa13.25□□□□□ -0.29
EDC3-218ENST00000570138 TEX14Q8IWB6 1497 aa13.24□□□□□ -0.29
EDC3-218ENST00000570138 KIF3BO15066 747 aa13.24□□□□□ -0.29
EDC3-218ENST00000570138 TSPOAP1O95153 1857 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms