RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 NEO1Q92859 1461 aa15.22■□□□□ 0.03
HCCAT5-201ENST00000569990 PHLDB1Q86UU1 1377 aa15.22■□□□□ 0.03
HCCAT5-201ENST00000569990 PLCH2O75038 1416 aa15.21■□□□□ 0.03
HCCAT5-201ENST00000569990 FANCAO15360 1455 aa15.2■□□□□ 0.02
HCCAT5-201ENST00000569990 CNKSR2Q8WXI2 1034 aa15.2■□□□□ 0.02
HCCAT5-201ENST00000569990 ARAP3Q8WWN8 1544 aa15.2■□□□□ 0.02
HCCAT5-201ENST00000569990 MTUS2Q5JR59 1369 aa15.2■□□□□ 0.02
HCCAT5-201ENST00000569990 MYO5CQ9NQX4 1742 aa15.19■□□□□ 0.02
HCCAT5-201ENST00000569990 TIAM1Q13009 1591 aa15.19■□□□□ 0.02
HCCAT5-201ENST00000569990 CFAP74Q9C0B2 1584 aa15.19■□□□□ 0.02
HCCAT5-201ENST00000569990 EHBP1L1Q8N3D4 1523 aa15.18■□□□□ 0.02
HCCAT5-201ENST00000569990 MAP3K1Q13233 1512 aa15.16■□□□□ 0.02
HCCAT5-201ENST00000569990 AKNAQ7Z591 1439 aa15.16■□□□□ 0.02
HCCAT5-201ENST00000569990 PREX2Q70Z35 1606 aa15.14■□□□□ 0.01
HCCAT5-201ENST00000569990 ARHGAP5Q13017 1502 aa15.14■□□□□ 0.01
HCCAT5-201ENST00000569990 EFCAB2Q5VUJ9 269 aa15.14■□□□□ 0.01
HCCAT5-201ENST00000569990 RNF39Q9H2S5 420 aa15.14■□□□□ 0.01
HCCAT5-201ENST00000569990 LRRC9Q6ZRR7 1453 aa15.13■□□□□ 0.01
HCCAT5-201ENST00000569990 GPATCH8Q9UKJ3 1502 aaKnown RBP15.12■□□□□ 0.01
HCCAT5-201ENST00000569990 CDC42BPAQ5VT25 1732 aa15.12■□□□□ 0.01
HCCAT5-201ENST00000569990 CDC42BPBQ9Y5S2 1711 aa15.12■□□□□ 0.01
HCCAT5-201ENST00000569990 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
HCCAT5-201ENST00000569990 ADGRL1O94910 1474 aa15.12■□□□□ 0.01
HCCAT5-201ENST00000569990 FRMPD1Q5SYB0 1578 aa15.11■□□□□ 0.01
HCCAT5-201ENST00000569990 RAPGEF3O95398 923 aa15.11■□□□□ 0.01
HCCAT5-201ENST00000569990 DENND4BO75064 1496 aaPredicted RBP15.11■□□□□ 0.01
HCCAT5-201ENST00000569990 CCNB3Q8WWL7 1395 aa15.1■□□□□ 0.01
HCCAT5-201ENST00000569990 SCAPERQ9BY12 1400 aa15.09■□□□□ 0.01
HCCAT5-201ENST00000569990 KANK4Q5T7N3 995 aaPredicted RBP15.09■□□□□ 0.01
HCCAT5-201ENST00000569990 RICTORQ6R327 1708 aa15.09■□□□□ 0.01
HCCAT5-201ENST00000569990 SUPT6HQ7KZ85 1726 aaKnown RBP15.09■□□□□ 0.01
HCCAT5-201ENST00000569990 NCOA2Q15596 1464 aa15.08■□□□□ 0.01
HCCAT5-201ENST00000569990 APLP2Q06481 763 aa15.07■□□□□ 0
HCCAT5-201ENST00000569990 POGZQ7Z3K3 1410 aa15.07■□□□□ 0
HCCAT5-201ENST00000569990 ABCC1P33527 1531 aa15.06■□□□□ 0
HCCAT5-201ENST00000569990 CFDP1Q9UEE9 299 aaPredicted RBP15.05■□□□□ -0
HCCAT5-201ENST00000569990 ZMYM4Q5VZL5 1548 aa15.05■□□□□ -0
HCCAT5-201ENST00000569990 ITSN2Q9NZM3 1697 aa15.05■□□□□ -0
HCCAT5-201ENST00000569990 SAMD9LQ8IVG5 1584 aa15.04■□□□□ -0
HCCAT5-201ENST00000569990 ARHGEF12Q9NZN5 1544 aa15.03■□□□□ -0
HCCAT5-201ENST00000569990 ZNF518AQ6AHZ1 1483 aa15.02■□□□□ -0
HCCAT5-201ENST00000569990 ZNF777Q9ULD5 760 aaPredicted RBP15.02■□□□□ -0
HCCAT5-201ENST00000569990 KDM5CP41229 1560 aa15.01□□□□□ -0.01
HCCAT5-201ENST00000569990 ARHGEF40Q8TER5 1519 aa15.01□□□□□ -0.01
HCCAT5-201ENST00000569990 MAGI2Q86UL8 1455 aa15.01□□□□□ -0.01
HCCAT5-201ENST00000569990 PLEKHH2Q8IVE3 1493 aa15.01□□□□□ -0.01
HCCAT5-201ENST00000569990 KIAA1107Q9UPP5 1409 aa15□□□□□ -0.01
HCCAT5-201ENST00000569990 TRAPPC8Q9Y2L5 1435 aa15□□□□□ -0.01
HCCAT5-201ENST00000569990 AFAP1Q8N556 730 aa15□□□□□ -0.01
HCCAT5-201ENST00000569990 SYCP2Q9BX26 1530 aa15□□□□□ -0.01
HCCAT5-201ENST00000569990 YEATS2Q9ULM3 1422 aa14.99□□□□□ -0.01
HCCAT5-201ENST00000569990 ZNF644Q9H582 1327 aaPredicted RBP14.98□□□□□ -0.01
HCCAT5-201ENST00000569990 ZFYVE16Q7Z3T8 1539 aa14.98□□□□□ -0.01
HCCAT5-201ENST00000569990 HNRNPMP52272 730 aaKnown RBP eCLIP14.97□□□□□ -0.01
HCCAT5-201ENST00000569990 MYOM3Q5VTT5 1437 aa14.97□□□□□ -0.01
HCCAT5-201ENST00000569990 HECW2Q9P2P5 1572 aa14.96□□□□□ -0.01
HCCAT5-201ENST00000569990 CAMSAP2Q08AD1 1489 aa14.95□□□□□ -0.02
HCCAT5-201ENST00000569990 MBD5Q9P267 1494 aa14.95□□□□□ -0.02
HCCAT5-201ENST00000569990 MLH3Q9UHC1 1453 aa14.95□□□□□ -0.02
HCCAT5-201ENST00000569990 MIA2Q96PC5 1412 aa14.94□□□□□ -0.02
HCCAT5-201ENST00000569990 KDM4FA0A1W2PPD8 638 aa14.93□□□□□ -0.02
HCCAT5-201ENST00000569990 C1QBPQ07021 282 aaKnown RBP14.93□□□□□ -0.02
HCCAT5-201ENST00000569990 DIP2CQ9Y2E4 1556 aa14.91□□□□□ -0.02
HCCAT5-201ENST00000569990 ATP10AO60312 1499 aa14.91□□□□□ -0.02
HCCAT5-201ENST00000569990 MYT1LQ9UL68 1186 aa14.91□□□□□ -0.02
HCCAT5-201ENST00000569990 SPAG9O60271 1321 aaKnown RBP14.91□□□□□ -0.02
HCCAT5-201ENST00000569990 KIDINS220Q9ULH0 1771 aa14.9□□□□□ -0.02
HCCAT5-201ENST00000569990 ABCA6Q8N139 1617 aa14.9□□□□□ -0.02
HCCAT5-201ENST00000569990 C9orf84Q5VXU9 1444 aa14.9□□□□□ -0.02
HCCAT5-201ENST00000569990 INO80Q9ULG1 1556 aaPredicted RBP14.9□□□□□ -0.02
HCCAT5-201ENST00000569990 CCDC141Q6ZP82 1450 aa14.89□□□□□ -0.03
HCCAT5-201ENST00000569990 FGD6Q6ZV73 1430 aa14.89□□□□□ -0.03
HCCAT5-201ENST00000569990 ARHGEF5Q12774 1597 aa14.89□□□□□ -0.03
HCCAT5-201ENST00000569990 SIGLEC1Q9BZZ2 1709 aa14.89□□□□□ -0.03
HCCAT5-201ENST00000569990 ATP7AQ04656 1500 aa14.88□□□□□ -0.03
HCCAT5-201ENST00000569990 RSPH4AQ5TD94 716 aa14.88□□□□□ -0.03
HCCAT5-201ENST00000569990 REREQ9P2R6 1566 aa14.88□□□□□ -0.03
HCCAT5-201ENST00000569990 PTPN23Q9H3S7 1636 aa14.87□□□□□ -0.03
HCCAT5-201ENST00000569990 ARID4BQ4LE39 1312 aaPredicted RBP14.87□□□□□ -0.03
HCCAT5-201ENST00000569990 RTEL1-TNFRSF6BF6WH68 1400 aa14.86□□□□□ -0.03
HCCAT5-201ENST00000569990 TCOF1Q13428 1488 aaKnown RBP14.86□□□□□ -0.03
HCCAT5-201ENST00000569990 BCORL1Q5H9F3 1711 aa14.85□□□□□ -0.03
HCCAT5-201ENST00000569990 PPARGC1BQ86YN6 1023 aaKnown RBP14.84□□□□□ -0.03
HCCAT5-201ENST00000569990 ADAMTSL3P82987 1691 aa14.84□□□□□ -0.03
HCCAT5-201ENST00000569990 AGLP35573 1532 aa14.82□□□□□ -0.04
HCCAT5-201ENST00000569990 TSPY4P0CV99 314 aa14.81□□□□□ -0.04
HCCAT5-201ENST00000569990 TSPY10P0CW01 314 aa14.81□□□□□ -0.04
HCCAT5-201ENST00000569990 A2MP01023 1474 aa14.81□□□□□ -0.04
HCCAT5-201ENST00000569990 PLXNC1O60486 1568 aa14.81□□□□□ -0.04
HCCAT5-201ENST00000569990 MAST1Q9Y2H9 1570 aa14.81□□□□□ -0.04
HCCAT5-201ENST00000569990 ABCC5O15440 1437 aa14.8□□□□□ -0.04
HCCAT5-201ENST00000569990 DNMT1P26358 1616 aaKnown RBP14.79□□□□□ -0.04
HCCAT5-201ENST00000569990 DAPK1P53355 1430 aa14.79□□□□□ -0.04
HCCAT5-201ENST00000569990 MLECQ14165 292 aa14.79□□□□□ -0.04
HCCAT5-201ENST00000569990 ADGBQ8N7X0 1667 aa14.79□□□□□ -0.04
HCCAT5-201ENST00000569990 MADDQ8WXG6 1647 aa14.79□□□□□ -0.04
HCCAT5-201ENST00000569990 SHANK2Q9UPX8 1470 aa14.78□□□□□ -0.04
HCCAT5-201ENST00000569990 NCBP3Q53F19 620 aaKnown RBP14.78□□□□□ -0.04
HCCAT5-201ENST00000569990 CROCC2H7BZ55 1655 aa14.77□□□□□ -0.04
HCCAT5-201ENST00000569990 FAM50AQ14320 339 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms