RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 MMRN1Q13201 1228 aa15.71■□□□□ 0.11
CHD9-220ENST00000569794 PKD2Q13563 968 aa15.71■□□□□ 0.11
CHD9-220ENST00000569794 KRTAP3-3Q9BYR6 98 aa15.7■□□□□ 0.1
CHD9-220ENST00000569794 KRTAP3-2Q9BYR7 98 aa15.7■□□□□ 0.1
CHD9-220ENST00000569794 STK25O00506 426 aa15.69■□□□□ 0.1
CHD9-220ENST00000569794 RIMBP2O15034 1052 aa15.68■□□□□ 0.1
CHD9-220ENST00000569794 MFRPQ9BY79 579 aa15.66■□□□□ 0.1
CHD9-220ENST00000569794 RGL2O15211 777 aa15.65■□□□□ 0.1
CHD9-220ENST00000569794 ZSWIM6Q9HCJ5 1215 aa15.62■□□□□ 0.09
CHD9-220ENST00000569794 ERBB3P21860 1342 aa15.61■□□□□ 0.09
CHD9-220ENST00000569794 GPR153Q6NV75 609 aa15.56■□□□□ 0.08
CHD9-220ENST00000569794 VARS2Q5ST30 1063 aaKnown RBP15.53■□□□□ 0.08
CHD9-220ENST00000569794 KIF3CO14782 793 aa15.49■□□□□ 0.07
CHD9-220ENST00000569794 ARSIQ5FYB1 569 aa15.48■□□□□ 0.07
CHD9-220ENST00000569794 C2orf72A6NCS6 295 aa15.46■□□□□ 0.07
CHD9-220ENST00000569794 ZNF687Q8N1G0 1237 aa15.42■□□□□ 0.06
CHD9-220ENST00000569794 KHSRPQ92945 711 aaKnown RBP eCLIP15.41■□□□□ 0.06
CHD9-220ENST00000569794 PPP1R37O75864 691 aa15.39■□□□□ 0.05
CHD9-220ENST00000569794 ZNF316A6NFI3 1004 aaPredicted RBP15.35■□□□□ 0.05
CHD9-220ENST00000569794 TMC2Q8TDI7 906 aa15.35■□□□□ 0.05
CHD9-220ENST00000569794 HS6ST3Q8IZP7 471 aa15.33■□□□□ 0.04
CHD9-220ENST00000569794 SLC34A2O95436 690 aa15.32■□□□□ 0.04
CHD9-220ENST00000569794 NUDT7P0C024 238 aa15.28■□□□□ 0.04
CHD9-220ENST00000569794 PCDHGA4Q9Y5G9 962 aa15.28■□□□□ 0.04
CHD9-220ENST00000569794 RNF166Q96A37 237 aaPredicted RBP15.24■□□□□ 0.03
CHD9-220ENST00000569794 MYT1LQ9UL68 1186 aa15.23■□□□□ 0.03
CHD9-220ENST00000569794 CHGAP10645 457 aaKnown RBP15.22■□□□□ 0.03
CHD9-220ENST00000569794 LHX6Q9UPM6 363 aa15.21■□□□□ 0.03
CHD9-220ENST00000569794 LSM11P83369 360 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHD9-220ENST00000569794 ANKRD13DQ6ZTN6 518 aa15.18■□□□□ 0.02
CHD9-220ENST00000569794 PTGER2P43116 358 aa15.17■□□□□ 0.02
CHD9-220ENST00000569794 DNAJC5Q9H3Z4 198 aa15.16■□□□□ 0.02
CHD9-220ENST00000569794 PBX2P40425 430 aa15.15■□□□□ 0.02
CHD9-220ENST00000569794 FOXK1P85037 733 aa15.15■□□□□ 0.02
CHD9-220ENST00000569794 GPHNQ9NQX3 736 aaPredicted RBP15.15■□□□□ 0.02
CHD9-220ENST00000569794 NKX1-1Q15270 411 aaPredicted RBP15.13■□□□□ 0.01
CHD9-220ENST00000569794 PTCD2Q8WV60 388 aaKnown RBP15.13■□□□□ 0.01
CHD9-220ENST00000569794 PLPP6Q8IY26 295 aa15.12■□□□□ 0.01
CHD9-220ENST00000569794 KDM4FA0A1W2PPD8 638 aa15.11■□□□□ 0.01
CHD9-220ENST00000569794 POTEEQ6S8J3 1075 aa15.11■□□□□ 0.01
CHD9-220ENST00000569794 DSG2Q14126 1118 aa15.09■□□□□ 0.01
CHD9-220ENST00000569794 AXIN2Q9Y2T1 843 aa15.09■□□□□ 0.01
CHD9-220ENST00000569794 PSDA5PKW4 1024 aaPredicted RBP15.06■□□□□ 0
CHD9-220ENST00000569794 RYDENQ9NUL5 291 aaKnown RBP15.04■□□□□ -0
CHD9-220ENST00000569794 ARHGAP33O14559 1287 aa15□□□□□ -0.01
CHD9-220ENST00000569794 TBC1D12O60347 775 aa14.98□□□□□ -0.01
CHD9-220ENST00000569794 CRISPLD2Q9H0B8 497 aa14.97□□□□□ -0.01
CHD9-220ENST00000569794 ADGRD1Q6QNK2 874 aa14.94□□□□□ -0.02
CHD9-220ENST00000569794 OXER1Q8TDS5 423 aa14.93□□□□□ -0.02
CHD9-220ENST00000569794 PPP4R3BQ5MIZ7 849 aa14.92□□□□□ -0.02
CHD9-220ENST00000569794 PSEN2P49810 448 aa14.9□□□□□ -0.02
CHD9-220ENST00000569794 GTPBP6O43824 516 aaPredicted RBP14.89□□□□□ -0.03
CHD9-220ENST00000569794 PPP1R15BQ5SWA1 713 aa14.89□□□□□ -0.03
CHD9-220ENST00000569794 DMRTA1Q5VZB9 504 aa14.89□□□□□ -0.03
CHD9-220ENST00000569794 UPF1Q92900 1129 aaKnown RBP eCLIP14.89□□□□□ -0.03
CHD9-220ENST00000569794 NCKAP5LQ9HCH0 1330 aa14.89□□□□□ -0.03
CHD9-220ENST00000569794 TK2O00142 265 aa14.88□□□□□ -0.03
CHD9-220ENST00000569794 PDE4AP27815 886 aa14.85□□□□□ -0.03
CHD9-220ENST00000569794 HRO43593 1189 aa14.83□□□□□ -0.04
CHD9-220ENST00000569794 KCNK17Q96T54 332 aa14.81□□□□□ -0.04
CHD9-220ENST00000569794 HCSTQ9UBK5 93 aa14.79□□□□□ -0.04
CHD9-220ENST00000569794 ZNF454Q8N9F8 522 aa14.78□□□□□ -0.04
CHD9-220ENST00000569794 DCAF8L2P0C7V8 631 aa14.77□□□□□ -0.05
CHD9-220ENST00000569794 KCNH8Q96L42 1107 aa14.77□□□□□ -0.05
CHD9-220ENST00000569794 LARP6Q9BRS8 491 aaKnown RBP14.76□□□□□ -0.05
CHD9-220ENST00000569794 DDX27Q96GQ7 796 aaKnown RBP14.75□□□□□ -0.05
CHD9-220ENST00000569794 FOSBP53539 338 aa14.74□□□□□ -0.05
CHD9-220ENST00000569794 BCL2L12Q9HB09 334 aa14.74□□□□□ -0.05
CHD9-220ENST00000569794 ANO8Q9HCE9 1232 aaPredicted RBP14.74□□□□□ -0.05
CHD9-220ENST00000569794 MFSD10Q14728 455 aa14.72□□□□□ -0.05
CHD9-220ENST00000569794 VPS9D1Q9Y2B5 631 aa14.71□□□□□ -0.05
CHD9-220ENST00000569794 EVI5O60447 810 aa14.7□□□□□ -0.06
CHD9-220ENST00000569794 JPH4Q96JJ6 628 aa14.69□□□□□ -0.06
CHD9-220ENST00000569794 STAC3Q96MF2 364 aa14.69□□□□□ -0.06
CHD9-220ENST00000569794 PLA2G2EQ9NZK7 142 aa14.68□□□□□ -0.06
CHD9-220ENST00000569794 KCTD12Q96CX2 325 aaKnown RBP14.67□□□□□ -0.06
CHD9-220ENST00000569794 SLC4A5Q9BY07 1137 aa14.67□□□□□ -0.06
CHD9-220ENST00000569794 PTPREP23469 700 aa14.65□□□□□ -0.06
CHD9-220ENST00000569794 MAP3K9P80192 1104 aa14.64□□□□□ -0.07
CHD9-220ENST00000569794 CADPS2Q86UW7 1296 aa14.64□□□□□ -0.07
CHD9-220ENST00000569794 EMILIN3Q9NT22 766 aa14.64□□□□□ -0.07
CHD9-220ENST00000569794 ZDHHC16Q969W1 377 aa14.63□□□□□ -0.07
CHD9-220ENST00000569794 ZBED2Q9BTP6 218 aa14.61□□□□□ -0.07
CHD9-220ENST00000569794 ADAM33Q9BZ11 813 aa14.61□□□□□ -0.07
CHD9-220ENST00000569794 BHMG1C9JSJ3 638 aaPredicted RBP14.58□□□□□ -0.08
CHD9-220ENST00000569794 PCDHGA10Q9Y5H3 936 aa14.53□□□□□ -0.08
CHD9-220ENST00000569794 PTPN5P54829 565 aa14.51□□□□□ -0.09
CHD9-220ENST00000569794 CAMK2BQ13554 666 aa14.49□□□□□ -0.09
CHD9-220ENST00000569794 MRPL50Q8N5N7 158 aaKnown RBP14.49□□□□□ -0.09
CHD9-220ENST00000569794 PPP1R3GB7ZBB8 358 aa14.48□□□□□ -0.09
CHD9-220ENST00000569794 THSD4Q6ZMP0 1018 aa14.48□□□□□ -0.09
CHD9-220ENST00000569794 GOLGA8CPA6NN73 597 aa14.47□□□□□ -0.09
CHD9-220ENST00000569794 NBPF3Q9H094 633 aa14.47□□□□□ -0.09
CHD9-220ENST00000569794 PHF14O94880 888 aa14.46□□□□□ -0.09
CHD9-220ENST00000569794 TYW1BQ6NUM6 668 aa14.46□□□□□ -0.09
CHD9-220ENST00000569794 FBXW7Q969H0 707 aa14.46□□□□□ -0.09
CHD9-220ENST00000569794 BBXQ8WY36 941 aaPredicted RBP14.45□□□□□ -0.1
CHD9-220ENST00000569794 WNT2BQ93097 391 aa14.45□□□□□ -0.1
CHD9-220ENST00000569794 COL9A1P20849 921 aa14.44□□□□□ -0.1
CHD9-220ENST00000569794 DPYSL4O14531 572 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms