RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 RICTORQ6R327 1708 aa17.58■□□□□ 0.41
SHCBP1-207ENST00000569702 PREX2Q70Z35 1606 aa17.58■□□□□ 0.4
SHCBP1-207ENST00000569702 EHBP1L1Q8N3D4 1523 aa17.57■□□□□ 0.4
SHCBP1-207ENST00000569702 KDM4FA0A1W2PPD8 638 aa17.57■□□□□ 0.4
SHCBP1-207ENST00000569702 GPATCH8Q9UKJ3 1502 aaKnown RBP17.57■□□□□ 0.4
SHCBP1-207ENST00000569702 CDC42BPAQ5VT25 1732 aa17.56■□□□□ 0.4
SHCBP1-207ENST00000569702 TIAM1Q13009 1591 aa17.56■□□□□ 0.4
SHCBP1-207ENST00000569702 POGZQ7Z3K3 1410 aa17.55■□□□□ 0.4
SHCBP1-207ENST00000569702 MAP3K1Q13233 1512 aa17.54■□□□□ 0.4
SHCBP1-207ENST00000569702 ZMYM4Q5VZL5 1548 aa17.54■□□□□ 0.4
SHCBP1-207ENST00000569702 CCNB3Q8WWL7 1395 aa17.53■□□□□ 0.4
SHCBP1-207ENST00000569702 MAGI2Q86UL8 1455 aa17.52■□□□□ 0.4
SHCBP1-207ENST00000569702 AEBP2Q6ZN18 517 aaPredicted RBP17.51■□□□□ 0.39
SHCBP1-207ENST00000569702 LRRC9Q6ZRR7 1453 aa17.5■□□□□ 0.39
SHCBP1-207ENST00000569702 ABCC1P33527 1531 aa17.5■□□□□ 0.39
SHCBP1-207ENST00000569702 ARHGEF12Q9NZN5 1544 aa17.5■□□□□ 0.39
SHCBP1-207ENST00000569702 ZNF518AQ6AHZ1 1483 aa17.5■□□□□ 0.39
SHCBP1-207ENST00000569702 AFAP1Q8N556 730 aa17.49■□□□□ 0.39
SHCBP1-207ENST00000569702 CFDP1Q9UEE9 299 aaPredicted RBP17.49■□□□□ 0.39
SHCBP1-207ENST00000569702 ARHGEF40Q8TER5 1519 aa17.48■□□□□ 0.39
SHCBP1-207ENST00000569702 KANK4Q5T7N3 995 aaPredicted RBP17.48■□□□□ 0.39
SHCBP1-207ENST00000569702 NCOA2Q15596 1464 aa17.48■□□□□ 0.39
SHCBP1-207ENST00000569702 KDM5CP41229 1560 aa17.48■□□□□ 0.39
SHCBP1-207ENST00000569702 YEATS2Q9ULM3 1422 aa17.47■□□□□ 0.39
SHCBP1-207ENST00000569702 ZNF777Q9ULD5 760 aaPredicted RBP17.47■□□□□ 0.39
SHCBP1-207ENST00000569702 SAMD9LQ8IVG5 1584 aa17.47■□□□□ 0.39
SHCBP1-207ENST00000569702 SUPT6HQ7KZ85 1726 aaKnown RBP17.47■□□□□ 0.39
SHCBP1-207ENST00000569702 ZFYVE16Q7Z3T8 1539 aa17.47■□□□□ 0.39
SHCBP1-207ENST00000569702 TRAPPC8Q9Y2L5 1435 aa17.47■□□□□ 0.39
SHCBP1-207ENST00000569702 KIAA1107Q9UPP5 1409 aa17.46■□□□□ 0.39
SHCBP1-207ENST00000569702 ITSN2Q9NZM3 1697 aa17.45■□□□□ 0.38
SHCBP1-207ENST00000569702 PLEKHH2Q8IVE3 1493 aa17.44■□□□□ 0.38
SHCBP1-207ENST00000569702 MLH3Q9UHC1 1453 aa17.44■□□□□ 0.38
SHCBP1-207ENST00000569702 HNRNPMP52272 730 aaKnown RBP eCLIP17.42■□□□□ 0.38
SHCBP1-207ENST00000569702 ZNF644Q9H582 1327 aaPredicted RBP17.42■□□□□ 0.38
SHCBP1-207ENST00000569702 SYCP2Q9BX26 1530 aa17.42■□□□□ 0.38
SHCBP1-207ENST00000569702 APLP2Q06481 763 aa17.41■□□□□ 0.38
SHCBP1-207ENST00000569702 ATP10AO60312 1499 aa17.41■□□□□ 0.38
SHCBP1-207ENST00000569702 HECW2Q9P2P5 1572 aa17.4■□□□□ 0.38
SHCBP1-207ENST00000569702 ARID4BQ4LE39 1312 aaPredicted RBP17.39■□□□□ 0.37
SHCBP1-207ENST00000569702 MBD5Q9P267 1494 aa17.38■□□□□ 0.37
SHCBP1-207ENST00000569702 SIGLEC1Q9BZZ2 1709 aa17.38■□□□□ 0.37
SHCBP1-207ENST00000569702 C9orf84Q5VXU9 1444 aa17.38■□□□□ 0.37
SHCBP1-207ENST00000569702 ADAMTSL3P82987 1691 aa17.36■□□□□ 0.37
SHCBP1-207ENST00000569702 BCORL1Q5H9F3 1711 aa17.36■□□□□ 0.37
SHCBP1-207ENST00000569702 DIP2CQ9Y2E4 1556 aa17.36■□□□□ 0.37
SHCBP1-207ENST00000569702 KIDINS220Q9ULH0 1771 aa17.35■□□□□ 0.37
SHCBP1-207ENST00000569702 MYT1LQ9UL68 1186 aa17.35■□□□□ 0.37
SHCBP1-207ENST00000569702 SPAG9O60271 1321 aaKnown RBP17.35■□□□□ 0.37
SHCBP1-207ENST00000569702 CAMSAP2Q08AD1 1489 aa17.34■□□□□ 0.37
SHCBP1-207ENST00000569702 MYOM3Q5VTT5 1437 aa17.34■□□□□ 0.37
SHCBP1-207ENST00000569702 ABCA6Q8N139 1617 aa17.34■□□□□ 0.37
SHCBP1-207ENST00000569702 REREQ9P2R6 1566 aa17.34■□□□□ 0.37
SHCBP1-207ENST00000569702 MIA2Q96PC5 1412 aa17.33■□□□□ 0.36
SHCBP1-207ENST00000569702 RSPH4AQ5TD94 716 aa17.32■□□□□ 0.36
SHCBP1-207ENST00000569702 INO80Q9ULG1 1556 aaPredicted RBP17.31■□□□□ 0.36
SHCBP1-207ENST00000569702 ATP7AQ04656 1500 aa17.3■□□□□ 0.36
SHCBP1-207ENST00000569702 AGLP35573 1532 aa17.29■□□□□ 0.36
SHCBP1-207ENST00000569702 CCDC141Q6ZP82 1450 aa17.29■□□□□ 0.36
SHCBP1-207ENST00000569702 RTEL1-TNFRSF6BF6WH68 1400 aa17.29■□□□□ 0.36
SHCBP1-207ENST00000569702 MADDQ8WXG6 1647 aa17.29■□□□□ 0.36
SHCBP1-207ENST00000569702 PTPRMP28827 1452 aa17.28■□□□□ 0.36
SHCBP1-207ENST00000569702 ARHGEF5Q12774 1597 aa17.28■□□□□ 0.36
SHCBP1-207ENST00000569702 MLECQ14165 292 aa17.26■□□□□ 0.35
SHCBP1-207ENST00000569702 FGD6Q6ZV73 1430 aa17.23■□□□□ 0.35
SHCBP1-207ENST00000569702 A2MP01023 1474 aa17.23■□□□□ 0.35
SHCBP1-207ENST00000569702 PLXNC1O60486 1568 aa17.23■□□□□ 0.35
SHCBP1-207ENST00000569702 TSPY4P0CV99 314 aa17.22■□□□□ 0.35
SHCBP1-207ENST00000569702 TSPY10P0CW01 314 aa17.22■□□□□ 0.35
SHCBP1-207ENST00000569702 RIMS1Q86UR5 1692 aaKnown RBP17.22■□□□□ 0.35
SHCBP1-207ENST00000569702 PTPN23Q9H3S7 1636 aa17.21■□□□□ 0.35
SHCBP1-207ENST00000569702 TCOF1Q13428 1488 aaKnown RBP17.2■□□□□ 0.34
SHCBP1-207ENST00000569702 FER1L4A9Z1Z3 1794 aa17.2■□□□□ 0.34
SHCBP1-207ENST00000569702 ADGBQ8N7X0 1667 aa17.2■□□□□ 0.34
SHCBP1-207ENST00000569702 DHX29Q7Z478 1369 aaKnown RBP17.19■□□□□ 0.34
SHCBP1-207ENST00000569702 MAST1Q9Y2H9 1570 aa17.19■□□□□ 0.34
SHCBP1-207ENST00000569702 ABCC5O15440 1437 aa17.16■□□□□ 0.34
SHCBP1-207ENST00000569702 DAPK1P53355 1430 aa17.13■□□□□ 0.33
SHCBP1-207ENST00000569702 SHANK2Q9UPX8 1470 aa17.13■□□□□ 0.33
SHCBP1-207ENST00000569702 CNTLNQ9NXG0 1405 aa17.13■□□□□ 0.33
SHCBP1-207ENST00000569702 DNMT1P26358 1616 aaKnown RBP17.12■□□□□ 0.33
SHCBP1-207ENST00000569702 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
SHCBP1-207ENST00000569702 CEBPAP49715 358 aaPredicted RBP17.11■□□□□ 0.33
SHCBP1-207ENST00000569702 GGT6Q6P531 493 aa17.11■□□□□ 0.33
SHCBP1-207ENST00000569702 PPARGC1BQ86YN6 1023 aaKnown RBP17.11■□□□□ 0.33
SHCBP1-207ENST00000569702 ESF1Q9H501 851 aaKnown RBP17.11■□□□□ 0.33
SHCBP1-207ENST00000569702 CROCC2H7BZ55 1655 aa17.1■□□□□ 0.33
SHCBP1-207ENST00000569702 KIF3BO15066 747 aa17.1■□□□□ 0.33
SHCBP1-207ENST00000569702 PLPPR3Q6T4P5 718 aa17.09■□□□□ 0.33
SHCBP1-207ENST00000569702 FAM50AQ14320 339 aaKnown RBP17.08■□□□□ 0.32
SHCBP1-207ENST00000569702 C3P01024 1663 aa17.07■□□□□ 0.32
SHCBP1-207ENST00000569702 LMTK3Q96Q04 1460 aa17.06■□□□□ 0.32
SHCBP1-207ENST00000569702 ZMYM3Q14202 1370 aa17.06■□□□□ 0.32
SHCBP1-207ENST00000569702 KIF15Q9NS87 1388 aa17.06■□□□□ 0.32
SHCBP1-207ENST00000569702 MROH2AA6NES4 1674 aa17.06■□□□□ 0.32
SHCBP1-207ENST00000569702 DUOX2Q9NRD8 1548 aa17.06■□□□□ 0.32
SHCBP1-207ENST00000569702 RRP7BPQ9NSQ0 103 aa17.05■□□□□ 0.32
SHCBP1-207ENST00000569702 NCOA1Q15788 1441 aa17.04■□□□□ 0.32
SHCBP1-207ENST00000569702 CHIC2Q9UKJ5 165 aa17.04■□□□□ 0.32
SHCBP1-207ENST00000569702 SETD1BQ9UPS6 1966 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms