RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 ABCA9Q8IUA7 1624 aa11.55□□□□□ -0.56
CDH13-214ENST00000569455 MYOM3Q5VTT5 1437 aa11.54□□□□□ -0.56
CDH13-214ENST00000569455 ILDR2Q71H61 639 aa11.53□□□□□ -0.56
CDH13-214ENST00000569455 KCNH8Q96L42 1107 aa11.53□□□□□ -0.56
CDH13-214ENST00000569455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.53□□□□□ -0.56
CDH13-214ENST00000569455 FGD6Q6ZV73 1430 aa11.52□□□□□ -0.56
CDH13-214ENST00000569455 KIF14Q15058 1648 aa11.52□□□□□ -0.57
CDH13-214ENST00000569455 ITSN2Q9NZM3 1697 aa11.52□□□□□ -0.57
CDH13-214ENST00000569455 CD109Q6YHK3 1445 aa11.52□□□□□ -0.57
CDH13-214ENST00000569455 DISP3Q9P2K9 1392 aa11.51□□□□□ -0.57
CDH13-214ENST00000569455 MIA2Q96PC5 1412 aa11.5□□□□□ -0.57
CDH13-214ENST00000569455 ARAP3Q8WWN8 1544 aa11.5□□□□□ -0.57
CDH13-214ENST00000569455 PTPN23Q9H3S7 1636 aa11.49□□□□□ -0.57
CDH13-214ENST00000569455 FAM50AQ14320 339 aaKnown RBP11.49□□□□□ -0.57
CDH13-214ENST00000569455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.48□□□□□ -0.57
CDH13-214ENST00000569455 TCOF1Q13428 1488 aaKnown RBP11.47□□□□□ -0.57
CDH13-214ENST00000569455 CFAP74Q9C0B2 1584 aa11.46□□□□□ -0.57
CDH13-214ENST00000569455 NEO1Q92859 1461 aa11.46□□□□□ -0.57
CDH13-214ENST00000569455 MYO5CQ9NQX4 1742 aa11.46□□□□□ -0.58
CDH13-214ENST00000569455 PLCH2O75038 1416 aa11.45□□□□□ -0.58
CDH13-214ENST00000569455 PTPRMP28827 1452 aa11.44□□□□□ -0.58
CDH13-214ENST00000569455 CDC42BPAQ5VT25 1732 aa11.44□□□□□ -0.58
CDH13-214ENST00000569455 TTC37Q6PGP7 1564 aa11.44□□□□□ -0.58
CDH13-214ENST00000569455 ITGAEP38570 1179 aa11.43□□□□□ -0.58
CDH13-214ENST00000569455 GPATCH8Q9UKJ3 1502 aaKnown RBP11.43□□□□□ -0.58
CDH13-214ENST00000569455 SPATA31D1Q6ZQQ2 1576 aa11.42□□□□□ -0.58
CDH13-214ENST00000569455 EFCAB2Q5VUJ9 269 aa11.42□□□□□ -0.58
CDH13-214ENST00000569455 ADAMTSL3P82987 1691 aa11.42□□□□□ -0.58
CDH13-214ENST00000569455 FANCAO15360 1455 aa11.41□□□□□ -0.58
CDH13-214ENST00000569455 CFDP1Q9UEE9 299 aaPredicted RBP11.41□□□□□ -0.58
CDH13-214ENST00000569455 PREX2Q70Z35 1606 aa11.41□□□□□ -0.58
CDH13-214ENST00000569455 HRCP23327 699 aa11.4□□□□□ -0.58
CDH13-214ENST00000569455 CAMSAP2Q08AD1 1489 aa11.39□□□□□ -0.59
CDH13-214ENST00000569455 ZEB1P37275 1124 aaPredicted RBP11.39□□□□□ -0.59
CDH13-214ENST00000569455 CERKQ8TCT0 537 aa11.39□□□□□ -0.59
CDH13-214ENST00000569455 CDC42BPBQ9Y5S2 1711 aa11.39□□□□□ -0.59
CDH13-214ENST00000569455 DNMT1P26358 1616 aaKnown RBP11.38□□□□□ -0.59
CDH13-214ENST00000569455 AKNAQ7Z591 1439 aa11.38□□□□□ -0.59
CDH13-214ENST00000569455 CCER1Q8TC90 406 aaPredicted RBP11.38□□□□□ -0.59
CDH13-214ENST00000569455 SETD5Q9C0A6 1442 aa11.37□□□□□ -0.59
CDH13-214ENST00000569455 ARHGAP5Q13017 1502 aa11.37□□□□□ -0.59
CDH13-214ENST00000569455 PLEKHH2Q8IVE3 1493 aa11.37□□□□□ -0.59
CDH13-214ENST00000569455 DAPK1P53355 1430 aa11.35□□□□□ -0.59
CDH13-214ENST00000569455 ZNF777Q9ULD5 760 aaPredicted RBP11.35□□□□□ -0.59
CDH13-214ENST00000569455 KIAA1107Q9UPP5 1409 aa11.35□□□□□ -0.59
CDH13-214ENST00000569455 CROCC2H7BZ55 1655 aa11.34□□□□□ -0.59
CDH13-214ENST00000569455 GCC2Q8IWJ2 1684 aa11.34□□□□□ -0.59
CDH13-214ENST00000569455 ADGBQ8N7X0 1667 aa11.34□□□□□ -0.59
CDH13-214ENST00000569455 DENND4BO75064 1496 aaPredicted RBP11.34□□□□□ -0.59
CDH13-214ENST00000569455 MADDQ8WXG6 1647 aa11.34□□□□□ -0.59
CDH13-214ENST00000569455 HFM1A2PYH4 1435 aa11.34□□□□□ -0.59
CDH13-214ENST00000569455 ARHGEF5Q12774 1597 aa11.33□□□□□ -0.6
CDH13-214ENST00000569455 RAB3GAP2Q9H2M9 1393 aa11.33□□□□□ -0.6
CDH13-214ENST00000569455 BCORL1Q5H9F3 1711 aa11.33□□□□□ -0.6
CDH13-214ENST00000569455 RSPH4AQ5TD94 716 aa11.33□□□□□ -0.6
CDH13-214ENST00000569455 ABCC5O15440 1437 aa11.33□□□□□ -0.6
CDH13-214ENST00000569455 PTPRKQ15262 1439 aa11.33□□□□□ -0.6
CDH13-214ENST00000569455 ZNF644Q9H582 1327 aaPredicted RBP11.33□□□□□ -0.6
CDH13-214ENST00000569455 SAMD9LQ8IVG5 1584 aa11.33□□□□□ -0.6
CDH13-214ENST00000569455 MAGI2Q86UL8 1455 aa11.32□□□□□ -0.6
CDH13-214ENST00000569455 RICTORQ6R327 1708 aa11.32□□□□□ -0.6
CDH13-214ENST00000569455 SCAPERQ9BY12 1400 aa11.32□□□□□ -0.6
CDH13-214ENST00000569455 ZNF518AQ6AHZ1 1483 aa11.32□□□□□ -0.6
CDH13-214ENST00000569455 ROCK1Q13464 1354 aa11.31□□□□□ -0.6
CDH13-214ENST00000569455 ABCC1P33527 1531 aa11.31□□□□□ -0.6
CDH13-214ENST00000569455 POGZQ7Z3K3 1410 aa11.31□□□□□ -0.6
CDH13-214ENST00000569455 ACIN1Q9UKV3 1341 aaKnown RBP11.31□□□□□ -0.6
CDH13-214ENST00000569455 SHANK2Q9UPX8 1470 aa11.31□□□□□ -0.6
CDH13-214ENST00000569455 ZMYM4Q5VZL5 1548 aa11.3□□□□□ -0.6
CDH13-214ENST00000569455 NAIPQ13075 1403 aa11.29□□□□□ -0.6
CDH13-214ENST00000569455 KDM5CP41229 1560 aa11.28□□□□□ -0.6
CDH13-214ENST00000569455 RIMS1Q86UR5 1692 aaKnown RBP11.28□□□□□ -0.6
CDH13-214ENST00000569455 ADGRL2O95490 1459 aa11.28□□□□□ -0.6
CDH13-214ENST00000569455 CCDC141Q6ZP82 1450 aa11.28□□□□□ -0.6
CDH13-214ENST00000569455 HSPA2P54652 639 aa11.28□□□□□ -0.6
CDH13-214ENST00000569455 CHIC2Q9UKJ5 165 aa11.28□□□□□ -0.6
CDH13-214ENST00000569455 CLSPNQ9HAW4 1339 aa11.28□□□□□ -0.6
CDH13-214ENST00000569455 FRMPD1Q5SYB0 1578 aa11.28□□□□□ -0.6
CDH13-214ENST00000569455 DHX57Q6P158 1386 aaKnown RBP11.28□□□□□ -0.6
CDH13-214ENST00000569455 MLH3Q9UHC1 1453 aa11.27□□□□□ -0.6
CDH13-214ENST00000569455 SYCP2Q9BX26 1530 aa11.27□□□□□ -0.61
CDH13-214ENST00000569455 RAPGEF3O95398 923 aa11.27□□□□□ -0.61
CDH13-214ENST00000569455 TSPY4P0CV99 314 aa11.27□□□□□ -0.61
CDH13-214ENST00000569455 TSPY10P0CW01 314 aa11.27□□□□□ -0.61
CDH13-214ENST00000569455 RRP7BPQ9NSQ0 103 aa11.27□□□□□ -0.61
CDH13-214ENST00000569455 ANKRD30AQ9BXX3 1397 aa11.27□□□□□ -0.61
CDH13-214ENST00000569455 MBD5Q9P267 1494 aa11.26□□□□□ -0.61
CDH13-214ENST00000569455 C9orf84Q5VXU9 1444 aa11.26□□□□□ -0.61
CDH13-214ENST00000569455 ARHGEF12Q9NZN5 1544 aa11.25□□□□□ -0.61
CDH13-214ENST00000569455 MAST1Q9Y2H9 1570 aa11.25□□□□□ -0.61
CDH13-214ENST00000569455 HNRNPMP52272 730 aaKnown RBP eCLIP11.25□□□□□ -0.61
CDH13-214ENST00000569455 RTEL1-TNFRSF6BF6WH68 1400 aa11.24□□□□□ -0.61
CDH13-214ENST00000569455 NCOA1Q15788 1441 aa11.24□□□□□ -0.61
CDH13-214ENST00000569455 AFAP1Q8N556 730 aa11.23□□□□□ -0.61
CDH13-214ENST00000569455 ARID4BQ4LE39 1312 aaPredicted RBP11.23□□□□□ -0.61
CDH13-214ENST00000569455 TRAPPC8Q9Y2L5 1435 aa11.23□□□□□ -0.61
CDH13-214ENST00000569455 ZFYVE16Q7Z3T8 1539 aa11.23□□□□□ -0.61
CDH13-214ENST00000569455 ARHGEF40Q8TER5 1519 aa11.23□□□□□ -0.61
CDH13-214ENST00000569455 SPAG9O60271 1321 aaKnown RBP11.22□□□□□ -0.61
CDH13-214ENST00000569455 PLXNC1O60486 1568 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms