RNA–Protein interactions for RNA: ENST00000569304.1

RAB11A-208, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB11A, Length 347 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-208ENST00000569304 SOX12O15370 315 aa9.63□□□□□ -0.87
RAB11A-208ENST00000569304 IRX5P78411 483 aaPredicted RBP9.63□□□□□ -0.87
RAB11A-208ENST00000569304 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.63□□□□□ -0.87
RAB11A-208ENST00000569304 NLRP6P59044 892 aa9.62□□□□□ -0.87
RAB11A-208ENST00000569304 OCEL1Q9H607 264 aa9.62□□□□□ -0.87
RAB11A-208ENST00000569304 CABP2Q9NPB3 220 aa9.62□□□□□ -0.87
RAB11A-208ENST00000569304 PPP1R37O75864 691 aa9.61□□□□□ -0.87
RAB11A-208ENST00000569304 P3H3Q8IVL6 736 aa9.61□□□□□ -0.87
RAB11A-208ENST00000569304 MARVELD3Q96A59 401 aa9.6□□□□□ -0.87
RAB11A-208ENST00000569304 PHF8Q9UPP1 1060 aa9.59□□□□□ -0.87
RAB11A-208ENST00000569304 WDR70Q9NW82 654 aa9.58□□□□□ -0.88
RAB11A-208ENST00000569304 KCNV2Q8TDN2 545 aa9.56□□□□□ -0.88
RAB11A-208ENST00000569304 EMP3P54852 163 aa9.52□□□□□ -0.89
RAB11A-208ENST00000569304 MS4A4AQ96JQ5 239 aa9.52□□□□□ -0.89
RAB11A-208ENST00000569304 C3orf67Q6ZVT6 689 aa9.5□□□□□ -0.89
RAB11A-208ENST00000569304 NCKAP5LQ9HCH0 1330 aa9.47□□□□□ -0.89
RAB11A-208ENST00000569304 GOLGA2Q08379 1002 aa9.46□□□□□ -0.9
RAB11A-208ENST00000569304 E2F4Q16254 413 aa9.46□□□□□ -0.9
RAB11A-208ENST00000569304 ARHGEF1Q92888 912 aaKnown RBP9.46□□□□□ -0.9
RAB11A-208ENST00000569304 L3MBTL3Q96JM7 780 aaPredicted RBP9.46□□□□□ -0.9
RAB11A-208ENST00000569304 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.44□□□□□ -0.9
RAB11A-208ENST00000569304 ILDR1Q86SU0 546 aaPredicted RBP9.44□□□□□ -0.9
RAB11A-208ENST00000569304 HS3ST6Q96QI5 342 aa9.44□□□□□ -0.9
RAB11A-208ENST00000569304 FAM205CA6NFA0 338 aa9.43□□□□□ -0.9
RAB11A-208ENST00000569304 MKRN3Q13064 507 aaKnown RBP9.43□□□□□ -0.9
RAB11A-208ENST00000569304 CRISPLD2Q9H0B8 497 aa9.43□□□□□ -0.9
RAB11A-208ENST00000569304 PDE4AP27815 886 aa9.42□□□□□ -0.9
RAB11A-208ENST00000569304 MFSD10Q14728 455 aa9.42□□□□□ -0.9
RAB11A-208ENST00000569304 PDCD7Q8N8D1 485 aaKnown RBP9.41□□□□□ -0.9
RAB11A-208ENST00000569304 LARP6Q9BRS8 491 aaKnown RBP9.41□□□□□ -0.9
RAB11A-208ENST00000569304 KRTAP3-3Q9BYR6 98 aa9.41□□□□□ -0.9
RAB11A-208ENST00000569304 KRTAP3-2Q9BYR7 98 aa9.41□□□□□ -0.9
RAB11A-208ENST00000569304 LMOD2Q6P5Q4 547 aa9.39□□□□□ -0.91
RAB11A-208ENST00000569304 POTEB3A0JP26 581 aa9.37□□□□□ -0.91
RAB11A-208ENST00000569304 POTEBQ6S5H4 581 aa9.37□□□□□ -0.91
RAB11A-208ENST00000569304 ARIH1Q9Y4X5 557 aaPredicted RBP9.37□□□□□ -0.91
RAB11A-208ENST00000569304 DDX27Q96GQ7 796 aaKnown RBP9.36□□□□□ -0.91
RAB11A-208ENST00000569304 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.36□□□□□ -0.91
RAB11A-208ENST00000569304 TESPA1A2RU30 521 aaPredicted RBP9.35□□□□□ -0.91
RAB11A-208ENST00000569304 SEMA3EO15041 775 aa9.35□□□□□ -0.91
RAB11A-208ENST00000569304 CAMK2BQ13554 666 aa9.35□□□□□ -0.91
RAB11A-208ENST00000569304 TULP1O00294 542 aaPredicted RBP9.34□□□□□ -0.91
RAB11A-208ENST00000569304 G3V3G9 751 aa9.31□□□□□ -0.92
RAB11A-208ENST00000569304 GPHNQ9NQX3 736 aaPredicted RBP9.31□□□□□ -0.92
RAB11A-208ENST00000569304 DPY19L2Q6NUT2 758 aa9.29□□□□□ -0.92
RAB11A-208ENST00000569304 ZNF710Q8N1W2 664 aa9.29□□□□□ -0.92
RAB11A-208ENST00000569304 PPP1R15BQ5SWA1 713 aa9.27□□□□□ -0.93
RAB11A-208ENST00000569304 ZC3H15Q8WU90 426 aaKnown RBP9.27□□□□□ -0.93
RAB11A-208ENST00000569304 MICALL2Q8IY33 904 aa9.26□□□□□ -0.93
RAB11A-208ENST00000569304 RNF166Q96A37 237 aaPredicted RBP9.26□□□□□ -0.93
RAB11A-208ENST00000569304 ERBB3P21860 1342 aa9.26□□□□□ -0.93
RAB11A-208ENST00000569304 SMYD5Q6GMV2 418 aa9.24□□□□□ -0.93
RAB11A-208ENST00000569304 HOXB1P14653 301 aaPredicted RBP9.23□□□□□ -0.93
RAB11A-208ENST00000569304 BOLA1Q9Y3E2 137 aa9.23□□□□□ -0.93
RAB11A-208ENST00000569304 HOXB3P14651 431 aaPredicted RBP9.22□□□□□ -0.93
RAB11A-208ENST00000569304 DSG2Q14126 1118 aa9.22□□□□□ -0.93
RAB11A-208ENST00000569304 DOK7Q18PE1 504 aa9.22□□□□□ -0.93
RAB11A-208ENST00000569304 FOXK1P85037 733 aa9.21□□□□□ -0.94
RAB11A-208ENST00000569304 EMILIN3Q9NT22 766 aa9.21□□□□□ -0.94
RAB11A-208ENST00000569304 RIMBP2O15034 1052 aa9.2□□□□□ -0.94
RAB11A-208ENST00000569304 TMC2Q8TDI7 906 aa9.19□□□□□ -0.94
RAB11A-208ENST00000569304 MYT1LQ9UL68 1186 aa9.19□□□□□ -0.94
RAB11A-208ENST00000569304 KIF3CO14782 793 aa9.18□□□□□ -0.94
RAB11A-208ENST00000569304 ZMYND10O75800 440 aa9.17□□□□□ -0.94
RAB11A-208ENST00000569304 MLLT3P42568 568 aaPredicted RBP9.17□□□□□ -0.94
RAB11A-208ENST00000569304 TMEM132AQ24JP5 1023 aa9.17□□□□□ -0.94
RAB11A-208ENST00000569304 SPDYE16A6NNV3 312 aaPredicted RBP9.16□□□□□ -0.94
RAB11A-208ENST00000569304 DPYSL4O14531 572 aa9.16□□□□□ -0.94
RAB11A-208ENST00000569304 PDIA6Q15084 440 aa9.16□□□□□ -0.94
RAB11A-208ENST00000569304 C2orf72A6NCS6 295 aa9.15□□□□□ -0.94
RAB11A-208ENST00000569304 VARS2Q5ST30 1063 aaKnown RBP9.15□□□□□ -0.94
RAB11A-208ENST00000569304 BRPF1P55201 1214 aaPredicted RBP9.14□□□□□ -0.95
RAB11A-208ENST00000569304 PLPP6Q8IY26 295 aa9.14□□□□□ -0.95
RAB11A-208ENST00000569304 SLC24A3Q9HC58 644 aa9.14□□□□□ -0.95
RAB11A-208ENST00000569304 RBM26Q5T8P6 1007 aaKnown RBP9.13□□□□□ -0.95
RAB11A-208ENST00000569304 BARGINQ6ZT62 677 aa9.13□□□□□ -0.95
RAB11A-208ENST00000569304 PTGER2P43116 358 aa9.11□□□□□ -0.95
RAB11A-208ENST00000569304 ZNF687Q8N1G0 1237 aa9.1□□□□□ -0.95
RAB11A-208ENST00000569304 TMEM92Q6UXU6 159 aa9.09□□□□□ -0.95
RAB11A-208ENST00000569304 ZSWIM6Q9HCJ5 1215 aa9.09□□□□□ -0.95
RAB11A-208ENST00000569304 GTF3C3Q9Y5Q9 886 aa9.09□□□□□ -0.95
RAB11A-208ENST00000569304 GPIHBP1Q8IV16 184 aa9.08□□□□□ -0.96
RAB11A-208ENST00000569304 MAP3K9P80192 1104 aa9.05□□□□□ -0.96
RAB11A-208ENST00000569304 NEUROD2Q15784 382 aa9.05□□□□□ -0.96
RAB11A-208ENST00000569304 OXER1Q8TDS5 423 aa9.05□□□□□ -0.96
RAB11A-208ENST00000569304 ANKRD13DQ6ZTN6 518 aa9.03□□□□□ -0.96
RAB11A-208ENST00000569304 AK7Q96M32 723 aa9.03□□□□□ -0.96
RAB11A-208ENST00000569304 GPR37O15354 613 aa9.02□□□□□ -0.97
RAB11A-208ENST00000569304 GPR153Q6NV75 609 aa9□□□□□ -0.97
RAB11A-208ENST00000569304 UPF1Q92900 1129 aaKnown RBP eCLIP9□□□□□ -0.97
RAB11A-208ENST00000569304 TIMELESSQ9UNS1 1208 aa9□□□□□ -0.97
RAB11A-208ENST00000569304 GRXCR2A6NFK2 248 aa8.99□□□□□ -0.97
RAB11A-208ENST00000569304 OSBPP22059 807 aa8.99□□□□□ -0.97
RAB11A-208ENST00000569304 KRI1Q8N9T8 703 aaKnown RBP8.99□□□□□ -0.97
RAB11A-208ENST00000569304 TBC1D12O60347 775 aa8.97□□□□□ -0.97
RAB11A-208ENST00000569304 PTCD2Q8WV60 388 aaKnown RBP8.97□□□□□ -0.97
RAB11A-208ENST00000569304 TRIM66O15016 1216 aa8.96□□□□□ -0.98
RAB11A-208ENST00000569304 SLC34A2O95436 690 aa8.95□□□□□ -0.98
RAB11A-208ENST00000569304 ARSIQ5FYB1 569 aa8.95□□□□□ -0.98
RAB11A-208ENST00000569304 ERICH6Q7L0X2 663 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms