RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 AKNAQ7Z591 1439 aa18.86■□□□□ 0.61
CHRFAM7A-206ENST00000569278 RANGAP1P46060 587 aaPredicted RBP18.85■□□□□ 0.61
CHRFAM7A-206ENST00000569278 YEATS2Q9ULM3 1422 aa18.83■□□□□ 0.61
CHRFAM7A-206ENST00000569278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.82■□□□□ 0.6
CHRFAM7A-206ENST00000569278 HNRNPUL2Q1KMD3 747 aaKnown RBP18.82■□□□□ 0.6
CHRFAM7A-206ENST00000569278 ZFYVE16Q7Z3T8 1539 aa18.81■□□□□ 0.6
CHRFAM7A-206ENST00000569278 HECW1Q76N89 1606 aa18.81■□□□□ 0.6
CHRFAM7A-206ENST00000569278 FAM9AQ8IZU1 332 aaPredicted RBP18.79■□□□□ 0.6
CHRFAM7A-206ENST00000569278 KIF14Q15058 1648 aa18.78■□□□□ 0.6
CHRFAM7A-206ENST00000569278 LRRIQ1Q96JM4 1722 aa18.78■□□□□ 0.6
CHRFAM7A-206ENST00000569278 POGZQ7Z3K3 1410 aa18.78■□□□□ 0.6
CHRFAM7A-206ENST00000569278 ARHGAP35Q9NRY4 1499 aa18.77■□□□□ 0.6
CHRFAM7A-206ENST00000569278 POTEDQ86YR6 584 aa18.77■□□□□ 0.6
CHRFAM7A-206ENST00000569278 PLEKHD1A6NEE1 506 aa18.76■□□□□ 0.59
CHRFAM7A-206ENST00000569278 PLCH2O75038 1416 aa18.74■□□□□ 0.59
CHRFAM7A-206ENST00000569278 MAGI2Q86UL8 1455 aa18.74■□□□□ 0.59
CHRFAM7A-206ENST00000569278 RNF216Q9NWF9 866 aaPredicted RBP18.74■□□□□ 0.59
CHRFAM7A-206ENST00000569278 MYO5CQ9NQX4 1742 aa18.74■□□□□ 0.59
CHRFAM7A-206ENST00000569278 FER1L4A9Z1Z3 1794 aa18.73■□□□□ 0.59
CHRFAM7A-206ENST00000569278 ARID4BQ4LE39 1312 aaPredicted RBP18.73■□□□□ 0.59
CHRFAM7A-206ENST00000569278 ARHGEF12Q9NZN5 1544 aa18.71■□□□□ 0.59
CHRFAM7A-206ENST00000569278 SCAPERQ9BY12 1400 aa18.7■□□□□ 0.58
CHRFAM7A-206ENST00000569278 KDM5CP41229 1560 aa18.69■□□□□ 0.58
CHRFAM7A-206ENST00000569278 HOXD11P31277 338 aaPredicted RBP18.69■□□□□ 0.58
CHRFAM7A-206ENST00000569278 FBXO41Q8TF61 875 aa18.69■□□□□ 0.58
CHRFAM7A-206ENST00000569278 FMN1Q68DA7 1419 aa18.67■□□□□ 0.58
CHRFAM7A-206ENST00000569278 HSPA2P54652 639 aa18.65■□□□□ 0.58
CHRFAM7A-206ENST00000569278 TROQ12816 1431 aaPredicted RBP18.65■□□□□ 0.58
CHRFAM7A-206ENST00000569278 C9orf84Q5VXU9 1444 aa18.65■□□□□ 0.58
CHRFAM7A-206ENST00000569278 CDC42BPBQ9Y5S2 1711 aa18.64■□□□□ 0.57
CHRFAM7A-206ENST00000569278 ATP10AO60312 1499 aa18.64■□□□□ 0.57
CHRFAM7A-206ENST00000569278 DIP2CQ9Y2E4 1556 aa18.64■□□□□ 0.57
CHRFAM7A-206ENST00000569278 ABCA6Q8N139 1617 aa18.63■□□□□ 0.57
CHRFAM7A-206ENST00000569278 EHMT2Q96KQ7 1210 aa18.61■□□□□ 0.57
CHRFAM7A-206ENST00000569278 PREX1Q8TCU6 1659 aa18.6■□□□□ 0.57
CHRFAM7A-206ENST00000569278 PREX2Q70Z35 1606 aa18.6■□□□□ 0.57
CHRFAM7A-206ENST00000569278 ZNF518AQ6AHZ1 1483 aa18.6■□□□□ 0.57
CHRFAM7A-206ENST00000569278 REREQ9P2R6 1566 aa18.59■□□□□ 0.57
CHRFAM7A-206ENST00000569278 ARHGAP5Q13017 1502 aa18.59■□□□□ 0.57
CHRFAM7A-206ENST00000569278 ABCC1P33527 1531 aa18.59■□□□□ 0.57
CHRFAM7A-206ENST00000569278 MLECQ14165 292 aa18.58■□□□□ 0.56
CHRFAM7A-206ENST00000569278 ITSN2Q9NZM3 1697 aa18.57■□□□□ 0.56
CHRFAM7A-206ENST00000569278 STRCQ7RTU9 1775 aa18.56■□□□□ 0.56
CHRFAM7A-206ENST00000569278 UBTFP17480 764 aaKnown RBP18.55■□□□□ 0.56
CHRFAM7A-206ENST00000569278 EFCAB2Q5VUJ9 269 aa18.54■□□□□ 0.56
CHRFAM7A-206ENST00000569278 CDC42BPAQ5VT25 1732 aa18.54■□□□□ 0.56
CHRFAM7A-206ENST00000569278 AFAP1Q8N556 730 aa18.53■□□□□ 0.56
CHRFAM7A-206ENST00000569278 TRAPPC8Q9Y2L5 1435 aa18.53■□□□□ 0.56
CHRFAM7A-206ENST00000569278 MLH3Q9UHC1 1453 aa18.52■□□□□ 0.56
CHRFAM7A-206ENST00000569278 CASKIN1Q8WXD9 1431 aa18.52■□□□□ 0.56
CHRFAM7A-206ENST00000569278 C3P01024 1663 aa18.52■□□□□ 0.56
CHRFAM7A-206ENST00000569278 KIDINS220Q9ULH0 1771 aa18.52■□□□□ 0.55
CHRFAM7A-206ENST00000569278 CLIP1P30622 1438 aa18.51■□□□□ 0.55
CHRFAM7A-206ENST00000569278 ATP1B4Q9UN42 357 aaPredicted RBP18.51■□□□□ 0.55
CHRFAM7A-206ENST00000569278 AGLP35573 1532 aa18.5■□□□□ 0.55
CHRFAM7A-206ENST00000569278 CEBPAP49715 358 aaPredicted RBP18.5■□□□□ 0.55
CHRFAM7A-206ENST00000569278 CCDC18Q5T9S5 1454 aa18.49■□□□□ 0.55
CHRFAM7A-206ENST00000569278 SAMD9LQ8IVG5 1584 aa18.47■□□□□ 0.55
CHRFAM7A-206ENST00000569278 CDK11AQ9UQ88 783 aaPredicted RBP18.47■□□□□ 0.55
CHRFAM7A-206ENST00000569278 FYCO1Q9BQS8 1478 aa18.45■□□□□ 0.54
CHRFAM7A-206ENST00000569278 CERKQ8TCT0 537 aa18.43■□□□□ 0.54
CHRFAM7A-206ENST00000569278 SYCP2Q9BX26 1530 aa18.43■□□□□ 0.54
CHRFAM7A-206ENST00000569278 UHRF1BP1Q6BDS2 1440 aa18.41■□□□□ 0.54
CHRFAM7A-206ENST00000569278 SETD1BQ9UPS6 1966 aaKnown RBP18.41■□□□□ 0.54
CHRFAM7A-206ENST00000569278 PLXNC1O60486 1568 aa18.4■□□□□ 0.54
CHRFAM7A-206ENST00000569278 GPATCH8Q9UKJ3 1502 aaKnown RBP18.39■□□□□ 0.54
CHRFAM7A-206ENST00000569278 INO80Q9ULG1 1556 aaPredicted RBP18.39■□□□□ 0.53
CHRFAM7A-206ENST00000569278 MROH2AA6NES4 1674 aa18.38■□□□□ 0.53
CHRFAM7A-206ENST00000569278 LTBP4Q8N2S1 1624 aa18.37■□□□□ 0.53
CHRFAM7A-206ENST00000569278 ATP7AQ04656 1500 aa18.34■□□□□ 0.53
CHRFAM7A-206ENST00000569278 NCOA1Q15788 1441 aa18.34■□□□□ 0.53
CHRFAM7A-206ENST00000569278 PTPRTO14522 1441 aa18.33■□□□□ 0.53
CHRFAM7A-206ENST00000569278 SUPT6HQ7KZ85 1726 aaKnown RBP18.33■□□□□ 0.52
CHRFAM7A-206ENST00000569278 CNTLNQ9NXG0 1405 aa18.32■□□□□ 0.52
CHRFAM7A-206ENST00000569278 ZNF142P52746 1687 aaPredicted RBP18.31■□□□□ 0.52
CHRFAM7A-206ENST00000569278 TIAM1Q13009 1591 aa18.3■□□□□ 0.52
CHRFAM7A-206ENST00000569278 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
CHRFAM7A-206ENST00000569278 CLTCQ00610 1675 aaKnown RBP18.3■□□□□ 0.52
CHRFAM7A-206ENST00000569278 MYO3AQ8NEV4 1616 aa18.3■□□□□ 0.52
CHRFAM7A-206ENST00000569278 NPATQ14207 1427 aa18.29■□□□□ 0.52
CHRFAM7A-206ENST00000569278 KIAA1107Q9UPP5 1409 aa18.29■□□□□ 0.52
CHRFAM7A-206ENST00000569278 CAMSAP1Q5T5Y3 1602 aa18.28■□□□□ 0.52
CHRFAM7A-206ENST00000569278 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
CHRFAM7A-206ENST00000569278 A2MP01023 1474 aa18.26■□□□□ 0.51
CHRFAM7A-206ENST00000569278 HNRNPMP52272 730 aaKnown RBP eCLIP18.25■□□□□ 0.51
CHRFAM7A-206ENST00000569278 MBD5Q9P267 1494 aa18.25■□□□□ 0.51
CHRFAM7A-206ENST00000569278 SLC4A1APQ9BWU0 796 aaKnown RBP18.24■□□□□ 0.51
CHRFAM7A-206ENST00000569278 ZNF777Q9ULD5 760 aaPredicted RBP18.24■□□□□ 0.51
CHRFAM7A-206ENST00000569278 SPAG9O60271 1321 aaKnown RBP18.23■□□□□ 0.51
CHRFAM7A-206ENST00000569278 PTPRKQ15262 1439 aa18.23■□□□□ 0.51
CHRFAM7A-206ENST00000569278 ADGBQ8N7X0 1667 aa18.23■□□□□ 0.51
CHRFAM7A-206ENST00000569278 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
CHRFAM7A-206ENST00000569278 ZMYM3Q14202 1370 aa18.23■□□□□ 0.51
CHRFAM7A-206ENST00000569278 CEP170BQ9Y4F5 1589 aaPredicted RBP18.22■□□□□ 0.51
CHRFAM7A-206ENST00000569278 EHBP1L1Q8N3D4 1523 aa18.22■□□□□ 0.51
CHRFAM7A-206ENST00000569278 TCOF1Q13428 1488 aaKnown RBP18.2■□□□□ 0.5
CHRFAM7A-206ENST00000569278 IQSEC2Q5JU85 1478 aa18.2■□□□□ 0.5
CHRFAM7A-206ENST00000569278 ZNF644Q9H582 1327 aaPredicted RBP18.2■□□□□ 0.5
CHRFAM7A-206ENST00000569278 CCNB3Q8WWL7 1395 aa18.19■□□□□ 0.5
CHRFAM7A-206ENST00000569278 PLA2R1Q13018 1463 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms