RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 PCF11O94913 1555 aaKnown RBP25.1■■□□□ 1.61
USB1-215ENST00000569252 AKNAQ7Z591 1439 aa25.09■■□□□ 1.61
USB1-215ENST00000569252 DENND4BO75064 1496 aaPredicted RBP25.09■■□□□ 1.61
USB1-215ENST00000569252 HSPA2P54652 639 aa25.08■■□□□ 1.61
USB1-215ENST00000569252 YEATS2Q9ULM3 1422 aa25.08■■□□□ 1.61
USB1-215ENST00000569252 FANCAO15360 1455 aa25.08■■□□□ 1.6
USB1-215ENST00000569252 FBXO41Q8TF61 875 aa25.07■■□□□ 1.6
USB1-215ENST00000569252 CCDC18Q5T9S5 1454 aa25.07■■□□□ 1.6
USB1-215ENST00000569252 MLECQ14165 292 aa25.04■■□□□ 1.6
USB1-215ENST00000569252 ZFYVE16Q7Z3T8 1539 aa24.99■■□□□ 1.59
USB1-215ENST00000569252 CFAP74Q9C0B2 1584 aa24.97■■□□□ 1.59
USB1-215ENST00000569252 ZMYM4Q5VZL5 1548 aa24.96■■□□□ 1.59
USB1-215ENST00000569252 MTUS2Q5JR59 1369 aa24.93■■□□□ 1.58
USB1-215ENST00000569252 SCAPERQ9BY12 1400 aa24.92■■□□□ 1.58
USB1-215ENST00000569252 FER1L4A9Z1Z3 1794 aa24.9■■□□□ 1.58
USB1-215ENST00000569252 KIF14Q15058 1648 aa24.9■■□□□ 1.58
USB1-215ENST00000569252 POGZQ7Z3K3 1410 aa24.88■■□□□ 1.57
USB1-215ENST00000569252 MAP3K1Q13233 1512 aa24.88■■□□□ 1.57
USB1-215ENST00000569252 TROQ12816 1431 aaPredicted RBP24.87■■□□□ 1.57
USB1-215ENST00000569252 PLCH2O75038 1416 aa24.86■■□□□ 1.57
USB1-215ENST00000569252 LRRIQ1Q96JM4 1722 aa24.86■■□□□ 1.57
USB1-215ENST00000569252 TIAM1Q13009 1591 aa24.85■■□□□ 1.57
USB1-215ENST00000569252 CEBPAP49715 358 aaPredicted RBP24.85■■□□□ 1.57
USB1-215ENST00000569252 KANK4Q5T7N3 995 aaPredicted RBP24.82■■□□□ 1.56
USB1-215ENST00000569252 MYO5CQ9NQX4 1742 aa24.82■■□□□ 1.56
USB1-215ENST00000569252 LRRC9Q6ZRR7 1453 aa24.79■■□□□ 1.56
USB1-215ENST00000569252 MAGI2Q86UL8 1455 aa24.79■■□□□ 1.56
USB1-215ENST00000569252 ARHGEF12Q9NZN5 1544 aa24.78■■□□□ 1.56
USB1-215ENST00000569252 ATP10AO60312 1499 aa24.77■■□□□ 1.56
USB1-215ENST00000569252 EHBP1L1Q8N3D4 1523 aa24.76■■□□□ 1.55
USB1-215ENST00000569252 AFAP1Q8N556 730 aa24.76■■□□□ 1.55
USB1-215ENST00000569252 C9orf84Q5VXU9 1444 aa24.76■■□□□ 1.55
USB1-215ENST00000569252 PPARGC1BQ86YN6 1023 aaKnown RBP24.75■■□□□ 1.55
USB1-215ENST00000569252 ARHGAP5Q13017 1502 aa24.74■■□□□ 1.55
USB1-215ENST00000569252 EFCAB2Q5VUJ9 269 aa24.73■■□□□ 1.55
USB1-215ENST00000569252 CERKQ8TCT0 537 aa24.73■■□□□ 1.55
USB1-215ENST00000569252 CCNB3Q8WWL7 1395 aa24.7■■□□□ 1.55
USB1-215ENST00000569252 MYT1LQ9UL68 1186 aa24.7■■□□□ 1.54
USB1-215ENST00000569252 PREX1Q8TCU6 1659 aa24.69■■□□□ 1.54
USB1-215ENST00000569252 DIP2CQ9Y2E4 1556 aa24.69■■□□□ 1.54
USB1-215ENST00000569252 ABCA6Q8N139 1617 aa24.68■■□□□ 1.54
USB1-215ENST00000569252 SUPT6HQ7KZ85 1726 aaKnown RBP24.67■■□□□ 1.54
USB1-215ENST00000569252 CDC42BPBQ9Y5S2 1711 aa24.67■■□□□ 1.54
USB1-215ENST00000569252 STRCQ7RTU9 1775 aa24.67■■□□□ 1.54
USB1-215ENST00000569252 KDM5CP41229 1560 aa24.67■■□□□ 1.54
USB1-215ENST00000569252 ZNF518AQ6AHZ1 1483 aa24.65■■□□□ 1.54
USB1-215ENST00000569252 NCOA2Q15596 1464 aa24.64■■□□□ 1.54
USB1-215ENST00000569252 CFDP1Q9UEE9 299 aaPredicted RBP24.64■■□□□ 1.54
USB1-215ENST00000569252 TRAPPC8Q9Y2L5 1435 aa24.63■■□□□ 1.53
USB1-215ENST00000569252 ZNF777Q9ULD5 760 aaPredicted RBP24.6■■□□□ 1.53
USB1-215ENST00000569252 C3P01024 1663 aa24.59■■□□□ 1.53
USB1-215ENST00000569252 PREX2Q70Z35 1606 aa24.58■■□□□ 1.53
USB1-215ENST00000569252 ABCC1P33527 1531 aa24.57■■□□□ 1.52
USB1-215ENST00000569252 ITSN2Q9NZM3 1697 aa24.57■■□□□ 1.52
USB1-215ENST00000569252 GPATCH8Q9UKJ3 1502 aaKnown RBP24.56■■□□□ 1.52
USB1-215ENST00000569252 UHRF1BP1Q6BDS2 1440 aa24.56■■□□□ 1.52
USB1-215ENST00000569252 CDC42BPAQ5VT25 1732 aa24.52■■□□□ 1.52
USB1-215ENST00000569252 KIDINS220Q9ULH0 1771 aa24.52■■□□□ 1.52
USB1-215ENST00000569252 MLH3Q9UHC1 1453 aa24.51■■□□□ 1.51
USB1-215ENST00000569252 MYOM3Q5VTT5 1437 aa24.51■■□□□ 1.51
USB1-215ENST00000569252 REREQ9P2R6 1566 aa24.5■■□□□ 1.51
USB1-215ENST00000569252 ILDR2Q71H61 639 aa24.49■■□□□ 1.51
USB1-215ENST00000569252 MIA2Q96PC5 1412 aa24.47■■□□□ 1.51
USB1-215ENST00000569252 SAMD9LQ8IVG5 1584 aa24.46■■□□□ 1.51
USB1-215ENST00000569252 SETD1BQ9UPS6 1966 aaKnown RBP24.45■■□□□ 1.51
USB1-215ENST00000569252 AGLP35573 1532 aa24.45■■□□□ 1.5
USB1-215ENST00000569252 FAM50AQ14320 339 aaKnown RBP24.44■■□□□ 1.5
USB1-215ENST00000569252 SYCP2Q9BX26 1530 aa24.44■■□□□ 1.5
USB1-215ENST00000569252 DISP3Q9P2K9 1392 aa24.43■■□□□ 1.5
USB1-215ENST00000569252 RSPH4AQ5TD94 716 aa24.42■■□□□ 1.5
USB1-215ENST00000569252 PLEKHH2Q8IVE3 1493 aa24.42■■□□□ 1.5
USB1-215ENST00000569252 ZNF644Q9H582 1327 aaPredicted RBP24.41■■□□□ 1.5
USB1-215ENST00000569252 HNRNPMP52272 730 aaKnown RBP eCLIP24.41■■□□□ 1.5
USB1-215ENST00000569252 ESF1Q9H501 851 aaKnown RBP24.41■■□□□ 1.5
USB1-215ENST00000569252 FGD6Q6ZV73 1430 aa24.41■■□□□ 1.5
USB1-215ENST00000569252 LTBP4Q8N2S1 1624 aa24.4■■□□□ 1.5
USB1-215ENST00000569252 DMRT2Q9Y5R5 561 aa24.39■■□□□ 1.49
USB1-215ENST00000569252 PTPRTO14522 1441 aa24.37■■□□□ 1.49
USB1-215ENST00000569252 NCOA1Q15788 1441 aa24.37■■□□□ 1.49
USB1-215ENST00000569252 KIAA1107Q9UPP5 1409 aa24.36■■□□□ 1.49
USB1-215ENST00000569252 TSPY4P0CV99 314 aa24.36■■□□□ 1.49
USB1-215ENST00000569252 TSPY10P0CW01 314 aa24.36■■□□□ 1.49
USB1-215ENST00000569252 CAMSAP1Q5T5Y3 1602 aa24.35■■□□□ 1.49
USB1-215ENST00000569252 CLTCQ00610 1675 aaKnown RBP24.34■■□□□ 1.49
USB1-215ENST00000569252 NCKAP5LQ9HCH0 1330 aa24.34■■□□□ 1.49
USB1-215ENST00000569252 CAMSAP2Q08AD1 1489 aa24.33■■□□□ 1.49
USB1-215ENST00000569252 PTPN23Q9H3S7 1636 aa24.33■■□□□ 1.49
USB1-215ENST00000569252 SPAG9O60271 1321 aaKnown RBP24.33■■□□□ 1.48
USB1-215ENST00000569252 ATP7AQ04656 1500 aa24.3■■□□□ 1.48
USB1-215ENST00000569252 ZMYM3Q14202 1370 aa24.3■■□□□ 1.48
USB1-215ENST00000569252 CNTLNQ9NXG0 1405 aa24.29■■□□□ 1.48
USB1-215ENST00000569252 ZNF335Q9H4Z2 1342 aaPredicted RBP24.29■■□□□ 1.48
USB1-215ENST00000569252 SPATA31D1Q6ZQQ2 1576 aa24.29■■□□□ 1.48
USB1-215ENST00000569252 INO80Q9ULG1 1556 aaPredicted RBP24.29■■□□□ 1.48
USB1-215ENST00000569252 MROH2AA6NES4 1674 aa24.28■■□□□ 1.48
USB1-215ENST00000569252 ITGAEP38570 1179 aa24.28■■□□□ 1.48
USB1-215ENST00000569252 TCOF1Q13428 1488 aaKnown RBP24.27■■□□□ 1.48
USB1-215ENST00000569252 MYO3AQ8NEV4 1616 aa24.27■■□□□ 1.48
USB1-215ENST00000569252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.27■■□□□ 1.48
USB1-215ENST00000569252 RRBP1Q9P2E9 1410 aaKnown RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms