RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 NUP153P49790 1475 aaKnown RBP14.21□□□□□ -0.14
CNOT1-214ENST00000568917 CCNB3Q8WWL7 1395 aa14.21□□□□□ -0.14
CNOT1-214ENST00000568917 HRCP23327 699 aa14.2□□□□□ -0.14
CNOT1-214ENST00000568917 ABCA8O94911 1581 aa14.2□□□□□ -0.14
CNOT1-214ENST00000568917 ARHGEF11O15085 1522 aa14.19□□□□□ -0.14
CNOT1-214ENST00000568917 REM2Q8IYK8 340 aaPredicted RBP14.17□□□□□ -0.14
CNOT1-214ENST00000568917 PHLDB1Q86UU1 1377 aa14.16□□□□□ -0.14
CNOT1-214ENST00000568917 ZEB1P37275 1124 aaPredicted RBP14.15□□□□□ -0.14
CNOT1-214ENST00000568917 CDK11AQ9UQ88 783 aaPredicted RBP14.15□□□□□ -0.14
CNOT1-214ENST00000568917 PLB1Q6P1J6 1458 aa14.15□□□□□ -0.14
CNOT1-214ENST00000568917 PTPRGP23470 1445 aa14.15□□□□□ -0.14
CNOT1-214ENST00000568917 CDK13Q14004 1512 aaKnown RBP14.14□□□□□ -0.15
CNOT1-214ENST00000568917 MAGI3Q5TCQ9 1506 aa14.14□□□□□ -0.15
CNOT1-214ENST00000568917 NCOA2Q15596 1464 aa14.14□□□□□ -0.15
CNOT1-214ENST00000568917 SPDYE4A6NLX3 237 aa14.14□□□□□ -0.15
CNOT1-214ENST00000568917 MYOM3Q5VTT5 1437 aa14.13□□□□□ -0.15
CNOT1-214ENST00000568917 ADCY10Q96PN6 1610 aa14.12□□□□□ -0.15
CNOT1-214ENST00000568917 FGD6Q6ZV73 1430 aa14.11□□□□□ -0.15
CNOT1-214ENST00000568917 TROQ12816 1431 aaPredicted RBP14.1□□□□□ -0.15
CNOT1-214ENST00000568917 MIA2Q96PC5 1412 aa14.1□□□□□ -0.15
CNOT1-214ENST00000568917 UACAQ9BZF9 1416 aa14.1□□□□□ -0.15
CNOT1-214ENST00000568917 UHRF1BP1LA0JNW5 1464 aa14.08□□□□□ -0.16
CNOT1-214ENST00000568917 ABCC2Q92887 1545 aa14.08□□□□□ -0.16
CNOT1-214ENST00000568917 TCOF1Q13428 1488 aaKnown RBP14.07□□□□□ -0.16
CNOT1-214ENST00000568917 ATP10BO94823 1461 aa14.07□□□□□ -0.16
CNOT1-214ENST00000568917 ERCC6L2Q5T890 1561 aa14.05□□□□□ -0.16
CNOT1-214ENST00000568917 PTPN23Q9H3S7 1636 aa14.05□□□□□ -0.16
CNOT1-214ENST00000568917 ITSN2Q9NZM3 1697 aa14.05□□□□□ -0.16
CNOT1-214ENST00000568917 KIF14Q15058 1648 aa14.03□□□□□ -0.16
CNOT1-214ENST00000568917 PLEKHD1A6NEE1 506 aa14.02□□□□□ -0.17
CNOT1-214ENST00000568917 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
CNOT1-214ENST00000568917 CHRDL2Q6WN34 429 aa14□□□□□ -0.17
CNOT1-214ENST00000568917 FAM50AQ14320 339 aaKnown RBP13.99□□□□□ -0.17
CNOT1-214ENST00000568917 CCER1Q8TC90 406 aaPredicted RBP13.99□□□□□ -0.17
CNOT1-214ENST00000568917 KDM5BQ9UGL1 1544 aa13.99□□□□□ -0.17
CNOT1-214ENST00000568917 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
CNOT1-214ENST00000568917 ABCC10Q5T3U5 1492 aa13.97□□□□□ -0.17
CNOT1-214ENST00000568917 AKNAQ7Z591 1439 aa13.97□□□□□ -0.17
CNOT1-214ENST00000568917 SETD5Q9C0A6 1442 aa13.96□□□□□ -0.18
CNOT1-214ENST00000568917 FKBP8Q14318 412 aa13.95□□□□□ -0.18
CNOT1-214ENST00000568917 ZCCHC11Q5TAX3 1644 aaKnown RBP13.95□□□□□ -0.18
CNOT1-214ENST00000568917 GPATCH8Q9UKJ3 1502 aaKnown RBP13.95□□□□□ -0.18
CNOT1-214ENST00000568917 ACIN1Q9UKV3 1341 aaKnown RBP13.94□□□□□ -0.18
CNOT1-214ENST00000568917 ARID3CA6NKF2 412 aa13.94□□□□□ -0.18
CNOT1-214ENST00000568917 PROM2Q8N271 834 aa13.94□□□□□ -0.18
CNOT1-214ENST00000568917 CDC42BPAQ5VT25 1732 aa13.94□□□□□ -0.18
CNOT1-214ENST00000568917 HFM1A2PYH4 1435 aa13.94□□□□□ -0.18
CNOT1-214ENST00000568917 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
CNOT1-214ENST00000568917 DNMT1P26358 1616 aaKnown RBP13.93□□□□□ -0.18
CNOT1-214ENST00000568917 RAB3GAP2Q9H2M9 1393 aa13.91□□□□□ -0.18
CNOT1-214ENST00000568917 PREX2Q70Z35 1606 aa13.91□□□□□ -0.18
CNOT1-214ENST00000568917 ROCK1Q13464 1354 aa13.9□□□□□ -0.18
CNOT1-214ENST00000568917 ITGAEP38570 1179 aa13.9□□□□□ -0.19
CNOT1-214ENST00000568917 GCC2Q8IWJ2 1684 aa13.9□□□□□ -0.19
CNOT1-214ENST00000568917 CAMSAP2Q08AD1 1489 aa13.89□□□□□ -0.19
CNOT1-214ENST00000568917 PTPRKQ15262 1439 aa13.89□□□□□ -0.19
CNOT1-214ENST00000568917 CFDP1Q9UEE9 299 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-214ENST00000568917 DHX57Q6P158 1386 aaKnown RBP13.88□□□□□ -0.19
CNOT1-214ENST00000568917 DAPK1P53355 1430 aa13.88□□□□□ -0.19
CNOT1-214ENST00000568917 CLEC11AQ9Y240 323 aa13.88□□□□□ -0.19
CNOT1-214ENST00000568917 CROCC2H7BZ55 1655 aa13.87□□□□□ -0.19
CNOT1-214ENST00000568917 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.87□□□□□ -0.19
CNOT1-214ENST00000568917 ARAP3Q8WWN8 1544 aa13.87□□□□□ -0.19
CNOT1-214ENST00000568917 MYO5CQ9NQX4 1742 aa13.87□□□□□ -0.19
CNOT1-214ENST00000568917 CDC42BPBQ9Y5S2 1711 aa13.86□□□□□ -0.19
CNOT1-214ENST00000568917 NAIPQ13075 1403 aa13.86□□□□□ -0.19
CNOT1-214ENST00000568917 SHANK2Q9UPX8 1470 aa13.86□□□□□ -0.19
CNOT1-214ENST00000568917 ARHGEF5Q12774 1597 aa13.85□□□□□ -0.19
CNOT1-214ENST00000568917 ABCC5O15440 1437 aa13.84□□□□□ -0.19
CNOT1-214ENST00000568917 ADGBQ8N7X0 1667 aa13.84□□□□□ -0.19
CNOT1-214ENST00000568917 ADGRL2O95490 1459 aa13.84□□□□□ -0.19
CNOT1-214ENST00000568917 PLEKHH2Q8IVE3 1493 aa13.84□□□□□ -0.19
CNOT1-214ENST00000568917 WDR7Q9Y4E6 1490 aa13.84□□□□□ -0.19
CNOT1-214ENST00000568917 RSPH4AQ5TD94 716 aa13.84□□□□□ -0.19
CNOT1-214ENST00000568917 TTC37Q6PGP7 1564 aa13.83□□□□□ -0.19
CNOT1-214ENST00000568917 KIAA1107Q9UPP5 1409 aa13.81□□□□□ -0.2
CNOT1-214ENST00000568917 FXR2P51116 673 aaKnown RBP eCLIP13.81□□□□□ -0.24e-8■■■■□ 23.1
CNOT1-214ENST00000568917 POTEHQ6S545 545 aa13.81□□□□□ -0.2
CNOT1-214ENST00000568917 ABCA9Q8IUA7 1624 aa13.8□□□□□ -0.2
CNOT1-214ENST00000568917 PLCH2O75038 1416 aa13.8□□□□□ -0.2
CNOT1-214ENST00000568917 PIP4P2Q8N4L2 257 aa13.8□□□□□ -0.2
CNOT1-214ENST00000568917 SAMD9LQ8IVG5 1584 aa13.8□□□□□ -0.2
CNOT1-214ENST00000568917 ARHGAP5Q13017 1502 aa13.79□□□□□ -0.2
CNOT1-214ENST00000568917 ZNF644Q9H582 1327 aaPredicted RBP13.78□□□□□ -0.2
CNOT1-214ENST00000568917 MBD5Q9P267 1494 aa13.77□□□□□ -0.2
CNOT1-214ENST00000568917 MAST1Q9Y2H9 1570 aa13.77□□□□□ -0.2
CNOT1-214ENST00000568917 NPM1P06748 294 aaKnown RBP eCLIP13.77□□□□□ -0.21
CNOT1-214ENST00000568917 NCOA1Q15788 1441 aa13.77□□□□□ -0.21
CNOT1-214ENST00000568917 CCDC141Q6ZP82 1450 aa13.77□□□□□ -0.21
CNOT1-214ENST00000568917 ANKRD30AQ9BXX3 1397 aa13.76□□□□□ -0.21
CNOT1-214ENST00000568917 ASXL2Q76L83 1435 aa13.76□□□□□ -0.21
CNOT1-214ENST00000568917 MAPKBP1O60336 1514 aa13.76□□□□□ -0.21
CNOT1-214ENST00000568917 RIMBP3CA6NJZ7 1639 aa13.73□□□□□ -0.21
CNOT1-214ENST00000568917 RIMBP3BA6NNM3 1639 aa13.73□□□□□ -0.21
CNOT1-214ENST00000568917 RIMBP3Q9UFD9 1639 aa13.73□□□□□ -0.21
CNOT1-214ENST00000568917 C9orf84Q5VXU9 1444 aa13.73□□□□□ -0.21
CNOT1-214ENST00000568917 TSPY4P0CV99 314 aa13.73□□□□□ -0.21
CNOT1-214ENST00000568917 TSPY10P0CW01 314 aa13.73□□□□□ -0.21
CNOT1-214ENST00000568917 EFCAB2Q5VUJ9 269 aa13.73□□□□□ -0.21
CNOT1-214ENST00000568917 ZNF777Q9ULD5 760 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms