RNA–Protein interactions for RNA: ENST00000568509.2

SPG7-219, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-219ENST00000568509 ILDR1Q86SU0 546 aaPredicted RBP24.33■■□□□ 1.49
SPG7-219ENST00000568509 ARHGEF40Q8TER5 1519 aa24.33■■□□□ 1.49
SPG7-219ENST00000568509 CLIP1P30622 1438 aa24.33■■□□□ 1.48
SPG7-219ENST00000568509 MAGI2Q86UL8 1455 aa24.32■■□□□ 1.48
SPG7-219ENST00000568509 YEATS2Q9ULM3 1422 aa24.32■■□□□ 1.48
SPG7-219ENST00000568509 POGZQ7Z3K3 1410 aa24.31■■□□□ 1.48
SPG7-219ENST00000568509 ZMYM4Q5VZL5 1548 aa24.3■■□□□ 1.48
SPG7-219ENST00000568509 ZFYVE16Q7Z3T8 1539 aa24.3■■□□□ 1.48
SPG7-219ENST00000568509 MYO5CQ9NQX4 1742 aa24.3■■□□□ 1.48
SPG7-219ENST00000568509 MLECQ14165 292 aa24.29■■□□□ 1.48
SPG7-219ENST00000568509 MADDQ8WXG6 1647 aa24.29■■□□□ 1.48
SPG7-219ENST00000568509 KIF14Q15058 1648 aa24.28■■□□□ 1.48
SPG7-219ENST00000568509 MYT1LQ9UL68 1186 aa24.28■■□□□ 1.48
SPG7-219ENST00000568509 CASKIN1Q8WXD9 1431 aa24.27■■□□□ 1.48
SPG7-219ENST00000568509 LRRIQ1Q96JM4 1722 aa24.26■■□□□ 1.47
SPG7-219ENST00000568509 AFAP1Q8N556 730 aa24.26■■□□□ 1.47
SPG7-219ENST00000568509 ARHGAP5Q13017 1502 aa24.24■■□□□ 1.47
SPG7-219ENST00000568509 ATP10AO60312 1499 aa24.22■■□□□ 1.47
SPG7-219ENST00000568509 RIMS1Q86UR5 1692 aaKnown RBP24.22■■□□□ 1.47
SPG7-219ENST00000568509 CCDC18Q5T9S5 1454 aa24.21■■□□□ 1.47
SPG7-219ENST00000568509 PCF11O94913 1555 aaKnown RBP24.19■■□□□ 1.46
SPG7-219ENST00000568509 ZNF518AQ6AHZ1 1483 aa24.18■■□□□ 1.46
SPG7-219ENST00000568509 SIGLEC1Q9BZZ2 1709 aa24.17■■□□□ 1.46
SPG7-219ENST00000568509 C9orf84Q5VXU9 1444 aa24.16■■□□□ 1.46
SPG7-219ENST00000568509 CDC42BPBQ9Y5S2 1711 aa24.15■■□□□ 1.46
SPG7-219ENST00000568509 FYCO1Q9BQS8 1478 aa24.13■■□□□ 1.45
SPG7-219ENST00000568509 ZNF777Q9ULD5 760 aaPredicted RBP24.12■■□□□ 1.45
SPG7-219ENST00000568509 LMTK3Q96Q04 1460 aa24.11■■□□□ 1.45
SPG7-219ENST00000568509 HSPA2P54652 639 aa24.11■■□□□ 1.45
SPG7-219ENST00000568509 KDM5CP41229 1560 aa24.08■■□□□ 1.45
SPG7-219ENST00000568509 FER1L4A9Z1Z3 1794 aa24.08■■□□□ 1.45
SPG7-219ENST00000568509 TRAPPC8Q9Y2L5 1435 aa24.08■■□□□ 1.44
SPG7-219ENST00000568509 PREX2Q70Z35 1606 aa24.07■■□□□ 1.44
SPG7-219ENST00000568509 CEBPAP49715 358 aaPredicted RBP24.07■■□□□ 1.44
SPG7-219ENST00000568509 ARHGEF12Q9NZN5 1544 aa24.06■■□□□ 1.44
SPG7-219ENST00000568509 MLH3Q9UHC1 1453 aa24.05■■□□□ 1.44
SPG7-219ENST00000568509 CDC42BPAQ5VT25 1732 aa24.03■■□□□ 1.44
SPG7-219ENST00000568509 ABCC1P33527 1531 aa24.02■■□□□ 1.44
SPG7-219ENST00000568509 HNRNPMP52272 730 aaKnown RBP eCLIP24.02■■□□□ 1.44
SPG7-219ENST00000568509 ESF1Q9H501 851 aaKnown RBP24.02■■□□□ 1.44
SPG7-219ENST00000568509 CFDP1Q9UEE9 299 aaPredicted RBP24.02■■□□□ 1.44
SPG7-219ENST00000568509 DIP2CQ9Y2E4 1556 aa24.01■■□□□ 1.43
SPG7-219ENST00000568509 GPATCH8Q9UKJ3 1502 aaKnown RBP24■■□□□ 1.43
SPG7-219ENST00000568509 MTUS2Q5JR59 1369 aa24■■□□□ 1.43
SPG7-219ENST00000568509 FBXO41Q8TF61 875 aa24■■□□□ 1.43
SPG7-219ENST00000568509 ITSN2Q9NZM3 1697 aa23.98■■□□□ 1.43
SPG7-219ENST00000568509 CCNB3Q8WWL7 1395 aa23.98■■□□□ 1.43
SPG7-219ENST00000568509 ABCA6Q8N139 1617 aa23.96■■□□□ 1.43
SPG7-219ENST00000568509 SPAG9O60271 1321 aaKnown RBP23.96■■□□□ 1.43
SPG7-219ENST00000568509 REREQ9P2R6 1566 aa23.95■■□□□ 1.43
SPG7-219ENST00000568509 KIDINS220Q9ULH0 1771 aa23.93■■□□□ 1.42
SPG7-219ENST00000568509 SAMD9LQ8IVG5 1584 aa23.92■■□□□ 1.42
SPG7-219ENST00000568509 SETD1BQ9UPS6 1966 aaKnown RBP23.92■■□□□ 1.42
SPG7-219ENST00000568509 AGLP35573 1532 aa23.92■■□□□ 1.42
SPG7-219ENST00000568509 CEP162Q5TB80 1403 aa23.9■■□□□ 1.42
SPG7-219ENST00000568509 SYCP2Q9BX26 1530 aa23.9■■□□□ 1.42
SPG7-219ENST00000568509 KIAA1107Q9UPP5 1409 aa23.89■■□□□ 1.42
SPG7-219ENST00000568509 PLEKHH2Q8IVE3 1493 aa23.89■■□□□ 1.41
SPG7-219ENST00000568509 PREX1Q8TCU6 1659 aa23.87■■□□□ 1.41
SPG7-219ENST00000568509 ZNF644Q9H582 1327 aaPredicted RBP23.86■■□□□ 1.41
SPG7-219ENST00000568509 UHRF1BP1Q6BDS2 1440 aa23.85■■□□□ 1.41
SPG7-219ENST00000568509 LOC105371045A0A1W2PR82 267 aa23.85■■□□□ 1.41
SPG7-219ENST00000568509 DMRT2Q9Y5R5 561 aa23.85■■□□□ 1.41
SPG7-219ENST00000568509 CNTLNQ9NXG0 1405 aa23.82■■□□□ 1.4
SPG7-219ENST00000568509 C3P01024 1663 aa23.81■■□□□ 1.4
SPG7-219ENST00000568509 GGT6Q6P531 493 aa23.8■■□□□ 1.4
SPG7-219ENST00000568509 CERKQ8TCT0 537 aa23.8■■□□□ 1.4
SPG7-219ENST00000568509 ATP7AQ04656 1500 aa23.8■■□□□ 1.4
SPG7-219ENST00000568509 SUPT6HQ7KZ85 1726 aaKnown RBP23.8■■□□□ 1.4
SPG7-219ENST00000568509 EHBP1L1Q8N3D4 1523 aa23.79■■□□□ 1.4
SPG7-219ENST00000568509 PIAS4Q8N2W9 510 aaPredicted RBP23.78■■□□□ 1.4
SPG7-219ENST00000568509 ZMYM3Q14202 1370 aa23.78■■□□□ 1.4
SPG7-219ENST00000568509 A2MP01023 1474 aa23.77■■□□□ 1.4
SPG7-219ENST00000568509 TIAM1Q13009 1591 aa23.77■■□□□ 1.4
SPG7-219ENST00000568509 MBD5Q9P267 1494 aa23.73■■□□□ 1.39
SPG7-219ENST00000568509 RSPH4AQ5TD94 716 aa23.73■■□□□ 1.39
SPG7-219ENST00000568509 INO80Q9ULG1 1556 aaPredicted RBP23.73■■□□□ 1.39
SPG7-219ENST00000568509 STRCQ7RTU9 1775 aa23.73■■□□□ 1.39
SPG7-219ENST00000568509 KCNA4P22459 653 aa23.71■■□□□ 1.39
SPG7-219ENST00000568509 NCOA2Q15596 1464 aa23.7■■□□□ 1.38
SPG7-219ENST00000568509 RTEL1-TNFRSF6BF6WH68 1400 aa23.7■■□□□ 1.38
SPG7-219ENST00000568509 NPATQ14207 1427 aa23.68■■□□□ 1.38
SPG7-219ENST00000568509 PLXNC1O60486 1568 aa23.68■■□□□ 1.38
SPG7-219ENST00000568509 MROH2AA6NES4 1674 aa23.67■■□□□ 1.38
SPG7-219ENST00000568509 ADGBQ8N7X0 1667 aa23.67■■□□□ 1.38
SPG7-219ENST00000568509 DHX29Q7Z478 1369 aaKnown RBP23.66■■□□□ 1.38
SPG7-219ENST00000568509 TSPY4P0CV99 314 aa23.65■■□□□ 1.38
SPG7-219ENST00000568509 TSPY10P0CW01 314 aa23.65■■□□□ 1.38
SPG7-219ENST00000568509 VPS8Q8N3P4 1428 aa23.65■■□□□ 1.38
SPG7-219ENST00000568509 CLTCQ00610 1675 aaKnown RBP23.65■■□□□ 1.38
SPG7-219ENST00000568509 KIF3BO15066 747 aa23.65■■□□□ 1.38
SPG7-219ENST00000568509 PTPRTO14522 1441 aa23.64■■□□□ 1.37
SPG7-219ENST00000568509 CAMSAP2Q08AD1 1489 aa23.62■■□□□ 1.37
SPG7-219ENST00000568509 CCDC141Q6ZP82 1450 aa23.61■■□□□ 1.37
SPG7-219ENST00000568509 KANK4Q5T7N3 995 aaPredicted RBP23.61■■□□□ 1.37
SPG7-219ENST00000568509 LRRC9Q6ZRR7 1453 aa23.61■■□□□ 1.37
SPG7-219ENST00000568509 PTPRKQ15262 1439 aa23.6■■□□□ 1.37
SPG7-219ENST00000568509 NCOA1Q15788 1441 aa23.59■■□□□ 1.37
SPG7-219ENST00000568509 NCKAP5LQ9HCH0 1330 aa23.58■■□□□ 1.37
SPG7-219ENST00000568509 CAMSAP1Q5T5Y3 1602 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms