RNA–Protein interactions for RNA: ENST00000568413.1

RPAP1-211, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-211ENST00000568413 PLCH2O75038 1416 aa13.84□□□□□ -0.19
RPAP1-211ENST00000568413 MADDQ8WXG6 1647 aa13.84□□□□□ -0.19
RPAP1-211ENST00000568413 FANCAO15360 1455 aa13.84□□□□□ -0.19
RPAP1-211ENST00000568413 ARHGEF40Q8TER5 1519 aa13.84□□□□□ -0.19
RPAP1-211ENST00000568413 BCORL1Q5H9F3 1711 aa13.84□□□□□ -0.19
RPAP1-211ENST00000568413 SIGLEC1Q9BZZ2 1709 aa13.84□□□□□ -0.19
RPAP1-211ENST00000568413 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.19
RPAP1-211ENST00000568413 AKNAQ7Z591 1439 aa13.83□□□□□ -0.2
RPAP1-211ENST00000568413 EFCAB2Q5VUJ9 269 aa13.83□□□□□ -0.2
RPAP1-211ENST00000568413 CFAP74Q9C0B2 1584 aa13.83□□□□□ -0.2
RPAP1-211ENST00000568413 CCNB3Q8WWL7 1395 aa13.83□□□□□ -0.2
RPAP1-211ENST00000568413 DENND4BO75064 1496 aaPredicted RBP13.82□□□□□ -0.2
RPAP1-211ENST00000568413 ILDR1Q86SU0 546 aaPredicted RBP13.82□□□□□ -0.2
RPAP1-211ENST00000568413 ARID4BQ4LE39 1312 aaPredicted RBP13.82□□□□□ -0.2
RPAP1-211ENST00000568413 PTPRMP28827 1452 aa13.81□□□□□ -0.2
RPAP1-211ENST00000568413 RIMS1Q86UR5 1692 aaKnown RBP13.81□□□□□ -0.2
RPAP1-211ENST00000568413 SUPT6HQ7KZ85 1726 aaKnown RBP13.8□□□□□ -0.2
RPAP1-211ENST00000568413 MYO5CQ9NQX4 1742 aa13.8□□□□□ -0.2
RPAP1-211ENST00000568413 YEATS2Q9ULM3 1422 aa13.8□□□□□ -0.2
RPAP1-211ENST00000568413 NCOA2Q15596 1464 aa13.8□□□□□ -0.2
RPAP1-211ENST00000568413 CFDP1Q9UEE9 299 aaPredicted RBP13.79□□□□□ -0.2
RPAP1-211ENST00000568413 GPATCH8Q9UKJ3 1502 aaKnown RBP13.79□□□□□ -0.2
RPAP1-211ENST00000568413 ARHGAP5Q13017 1502 aa13.77□□□□□ -0.21
RPAP1-211ENST00000568413 ZMYM4Q5VZL5 1548 aa13.77□□□□□ -0.21
RPAP1-211ENST00000568413 PLPPR3Q6T4P5 718 aa13.77□□□□□ -0.21
RPAP1-211ENST00000568413 ZFYVE16Q7Z3T8 1539 aa13.76□□□□□ -0.21
RPAP1-211ENST00000568413 CDC42BPAQ5VT25 1732 aa13.76□□□□□ -0.21
RPAP1-211ENST00000568413 CDC42BPBQ9Y5S2 1711 aa13.76□□□□□ -0.21
RPAP1-211ENST00000568413 ZNF777Q9ULD5 760 aaPredicted RBP13.75□□□□□ -0.21
RPAP1-211ENST00000568413 PREX2Q70Z35 1606 aa13.75□□□□□ -0.21
RPAP1-211ENST00000568413 SCAPERQ9BY12 1400 aa13.74□□□□□ -0.21
RPAP1-211ENST00000568413 POGZQ7Z3K3 1410 aa13.73□□□□□ -0.21
RPAP1-211ENST00000568413 PPARGC1BQ86YN6 1023 aaKnown RBP13.73□□□□□ -0.21
RPAP1-211ENST00000568413 ITSN2Q9NZM3 1697 aa13.72□□□□□ -0.21
RPAP1-211ENST00000568413 MLECQ14165 292 aa13.72□□□□□ -0.21
RPAP1-211ENST00000568413 MYOM3Q5VTT5 1437 aa13.72□□□□□ -0.21
RPAP1-211ENST00000568413 FER1L4A9Z1Z3 1794 aa13.71□□□□□ -0.22
RPAP1-211ENST00000568413 PLEKHH2Q8IVE3 1493 aa13.7□□□□□ -0.22
RPAP1-211ENST00000568413 MIA2Q96PC5 1412 aa13.7□□□□□ -0.22
RPAP1-211ENST00000568413 LMTK3Q96Q04 1460 aa13.69□□□□□ -0.22
RPAP1-211ENST00000568413 KIAA1107Q9UPP5 1409 aa13.69□□□□□ -0.22
RPAP1-211ENST00000568413 ZNF644Q9H582 1327 aaPredicted RBP13.68□□□□□ -0.22
RPAP1-211ENST00000568413 HNRNPMP52272 730 aaKnown RBP eCLIP13.68□□□□□ -0.22
RPAP1-211ENST00000568413 RSPH4AQ5TD94 716 aa13.68□□□□□ -0.22
RPAP1-211ENST00000568413 MAGI2Q86UL8 1455 aa13.67□□□□□ -0.22
RPAP1-211ENST00000568413 SAMD9LQ8IVG5 1584 aa13.66□□□□□ -0.22
RPAP1-211ENST00000568413 HSPA2P54652 639 aa13.66□□□□□ -0.22
RPAP1-211ENST00000568413 AFAP1Q8N556 730 aa13.66□□□□□ -0.22
RPAP1-211ENST00000568413 ABCC1P33527 1531 aa13.65□□□□□ -0.22
RPAP1-211ENST00000568413 ZNF518AQ6AHZ1 1483 aa13.65□□□□□ -0.22
RPAP1-211ENST00000568413 C9orf84Q5VXU9 1444 aa13.64□□□□□ -0.23
RPAP1-211ENST00000568413 FGD6Q6ZV73 1430 aa13.64□□□□□ -0.23
RPAP1-211ENST00000568413 ARHGEF12Q9NZN5 1544 aa13.64□□□□□ -0.23
RPAP1-211ENST00000568413 KDM5CP41229 1560 aa13.64□□□□□ -0.23
RPAP1-211ENST00000568413 ATP10AO60312 1499 aa13.64□□□□□ -0.23
RPAP1-211ENST00000568413 TRAPPC8Q9Y2L5 1435 aa13.64□□□□□ -0.23
RPAP1-211ENST00000568413 DIP2CQ9Y2E4 1556 aa13.63□□□□□ -0.23
RPAP1-211ENST00000568413 CAMSAP2Q08AD1 1489 aa13.63□□□□□ -0.23
RPAP1-211ENST00000568413 MYT1LQ9UL68 1186 aa13.63□□□□□ -0.23
RPAP1-211ENST00000568413 ABCA6Q8N139 1617 aa13.63□□□□□ -0.23
RPAP1-211ENST00000568413 MBD5Q9P267 1494 aa13.62□□□□□ -0.23
RPAP1-211ENST00000568413 TSPY4P0CV99 314 aa13.62□□□□□ -0.23
RPAP1-211ENST00000568413 TSPY10P0CW01 314 aa13.62□□□□□ -0.23
RPAP1-211ENST00000568413 SYCP2Q9BX26 1530 aa13.62□□□□□ -0.23
RPAP1-211ENST00000568413 FAM50AQ14320 339 aaKnown RBP13.61□□□□□ -0.23
RPAP1-211ENST00000568413 SPAG9O60271 1321 aaKnown RBP13.61□□□□□ -0.23
RPAP1-211ENST00000568413 PTPN23Q9H3S7 1636 aa13.61□□□□□ -0.23
RPAP1-211ENST00000568413 CEBPAP49715 358 aaPredicted RBP13.6□□□□□ -0.23
RPAP1-211ENST00000568413 TCOF1Q13428 1488 aaKnown RBP13.6□□□□□ -0.23
RPAP1-211ENST00000568413 MLH3Q9UHC1 1453 aa13.59□□□□□ -0.23
RPAP1-211ENST00000568413 CCDC141Q6ZP82 1450 aa13.58□□□□□ -0.24
RPAP1-211ENST00000568413 ARHGEF5Q12774 1597 aa13.58□□□□□ -0.24
RPAP1-211ENST00000568413 KIDINS220Q9ULH0 1771 aa13.57□□□□□ -0.24
RPAP1-211ENST00000568413 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.57□□□□□ -0.24
RPAP1-211ENST00000568413 PREX1Q8TCU6 1659 aa13.56□□□□□ -0.24
RPAP1-211ENST00000568413 RTEL1-TNFRSF6BF6WH68 1400 aa13.56□□□□□ -0.24
RPAP1-211ENST00000568413 ABCC5O15440 1437 aa13.54□□□□□ -0.24
RPAP1-211ENST00000568413 RRBP1Q9P2E9 1410 aaKnown RBP13.54□□□□□ -0.24
RPAP1-211ENST00000568413 REREQ9P2R6 1566 aa13.54□□□□□ -0.24
RPAP1-211ENST00000568413 C3P01024 1663 aa13.53□□□□□ -0.24
RPAP1-211ENST00000568413 FBXO41Q8TF61 875 aa13.53□□□□□ -0.24
RPAP1-211ENST00000568413 DAPK1P53355 1430 aa13.53□□□□□ -0.24
RPAP1-211ENST00000568413 ATP7AQ04656 1500 aa13.52□□□□□ -0.25
RPAP1-211ENST00000568413 DNMT1P26358 1616 aaKnown RBP13.51□□□□□ -0.25
RPAP1-211ENST00000568413 INO80Q9ULG1 1556 aaPredicted RBP13.5□□□□□ -0.25
RPAP1-211ENST00000568413 CHIC2Q9UKJ5 165 aa13.5□□□□□ -0.25
RPAP1-211ENST00000568413 STRCQ7RTU9 1775 aa13.5□□□□□ -0.25
RPAP1-211ENST00000568413 MAST1Q9Y2H9 1570 aa13.49□□□□□ -0.25
RPAP1-211ENST00000568413 SHANK2Q9UPX8 1470 aa13.49□□□□□ -0.25
RPAP1-211ENST00000568413 ITGAEP38570 1179 aa13.49□□□□□ -0.25
RPAP1-211ENST00000568413 AGLP35573 1532 aa13.49□□□□□ -0.25
RPAP1-211ENST00000568413 DHX29Q7Z478 1369 aaKnown RBP13.47□□□□□ -0.25
RPAP1-211ENST00000568413 ANKRD30AQ9BXX3 1397 aa13.47□□□□□ -0.25
RPAP1-211ENST00000568413 RRP7BPQ9NSQ0 103 aa13.47□□□□□ -0.25
RPAP1-211ENST00000568413 A2MP01023 1474 aa13.47□□□□□ -0.25
RPAP1-211ENST00000568413 SETD1BQ9UPS6 1966 aaKnown RBP13.47□□□□□ -0.25
RPAP1-211ENST00000568413 UHRF1BP1Q6BDS2 1440 aa13.47□□□□□ -0.25
RPAP1-211ENST00000568413 CROCC2H7BZ55 1655 aa13.46□□□□□ -0.26
RPAP1-211ENST00000568413 NCOA1Q15788 1441 aa13.46□□□□□ -0.26
RPAP1-211ENST00000568413 ADGBQ8N7X0 1667 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms