RNA–Protein interactions for RNA: ENST00000568292.1

CDH3-207, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-207ENST00000568292 FRMPD1Q5SYB0 1578 aa16.31■□□□□ 0.2
CDH3-207ENST00000568292 AFAP1Q8N556 730 aa16.31■□□□□ 0.2
CDH3-207ENST00000568292 MYT1LQ9UL68 1186 aa16.31■□□□□ 0.2
CDH3-207ENST00000568292 MAGI2Q86UL8 1455 aa16.3■□□□□ 0.2
CDH3-207ENST00000568292 ZNF777Q9ULD5 760 aaPredicted RBP16.3■□□□□ 0.2
CDH3-207ENST00000568292 POGZQ7Z3K3 1410 aa16.29■□□□□ 0.2
CDH3-207ENST00000568292 RICTORQ6R327 1708 aa16.28■□□□□ 0.2
CDH3-207ENST00000568292 CCNB3Q8WWL7 1395 aa16.28■□□□□ 0.2
CDH3-207ENST00000568292 CFDP1Q9UEE9 299 aaPredicted RBP16.28■□□□□ 0.2
CDH3-207ENST00000568292 ZMYM4Q5VZL5 1548 aa16.25■□□□□ 0.19
CDH3-207ENST00000568292 GPATCH8Q9UKJ3 1502 aaKnown RBP16.25■□□□□ 0.19
CDH3-207ENST00000568292 ZNF518AQ6AHZ1 1483 aa16.25■□□□□ 0.19
CDH3-207ENST00000568292 VPS8Q8N3P4 1428 aa16.25■□□□□ 0.19
CDH3-207ENST00000568292 YEATS2Q9ULM3 1422 aa16.25■□□□□ 0.19
CDH3-207ENST00000568292 ZFYVE16Q7Z3T8 1539 aa16.24■□□□□ 0.19
CDH3-207ENST00000568292 HNRNPMP52272 730 aaKnown RBP eCLIP16.24■□□□□ 0.19
CDH3-207ENST00000568292 CDC42BPBQ9Y5S2 1711 aa16.24■□□□□ 0.19
CDH3-207ENST00000568292 ATP10AO60312 1499 aa16.23■□□□□ 0.19
CDH3-207ENST00000568292 PREX2Q70Z35 1606 aa16.23■□□□□ 0.19
CDH3-207ENST00000568292 ARHGEF40Q8TER5 1519 aa16.22■□□□□ 0.19
CDH3-207ENST00000568292 APLP2Q06481 763 aa16.21■□□□□ 0.19
CDH3-207ENST00000568292 TRAPPC8Q9Y2L5 1435 aa16.2■□□□□ 0.18
CDH3-207ENST00000568292 MLECQ14165 292 aa16.2■□□□□ 0.18
CDH3-207ENST00000568292 EHBP1L1Q8N3D4 1523 aa16.19■□□□□ 0.18
CDH3-207ENST00000568292 ARHGEF12Q9NZN5 1544 aa16.19■□□□□ 0.18
CDH3-207ENST00000568292 CDC42BPAQ5VT25 1732 aa16.19■□□□□ 0.18
CDH3-207ENST00000568292 PLEKHH2Q8IVE3 1493 aa16.18■□□□□ 0.18
CDH3-207ENST00000568292 MLH3Q9UHC1 1453 aa16.18■□□□□ 0.18
CDH3-207ENST00000568292 C9orf84Q5VXU9 1444 aa16.18■□□□□ 0.18
CDH3-207ENST00000568292 KIAA1107Q9UPP5 1409 aa16.18■□□□□ 0.18
CDH3-207ENST00000568292 ABCC1P33527 1531 aa16.17■□□□□ 0.18
CDH3-207ENST00000568292 SPAG9O60271 1321 aaKnown RBP16.17■□□□□ 0.18
CDH3-207ENST00000568292 ADAMTSL3P82987 1691 aa16.16■□□□□ 0.18
CDH3-207ENST00000568292 KDM5CP41229 1560 aa16.16■□□□□ 0.18
CDH3-207ENST00000568292 BCORL1Q5H9F3 1711 aa16.16■□□□□ 0.18
CDH3-207ENST00000568292 ZNF644Q9H582 1327 aaPredicted RBP16.16■□□□□ 0.18
CDH3-207ENST00000568292 TIAM1Q13009 1591 aa16.15■□□□□ 0.18
CDH3-207ENST00000568292 KANK4Q5T7N3 995 aaPredicted RBP16.15■□□□□ 0.18
CDH3-207ENST00000568292 PTPRMP28827 1452 aa16.15■□□□□ 0.18
CDH3-207ENST00000568292 SAMD9LQ8IVG5 1584 aa16.14■□□□□ 0.17
CDH3-207ENST00000568292 RSPH4AQ5TD94 716 aa16.14■□□□□ 0.17
CDH3-207ENST00000568292 NCOA2Q15596 1464 aa16.14■□□□□ 0.17
CDH3-207ENST00000568292 MAP3K1Q13233 1512 aa16.14■□□□□ 0.17
CDH3-207ENST00000568292 LRRC9Q6ZRR7 1453 aa16.13■□□□□ 0.17
CDH3-207ENST00000568292 ITSN2Q9NZM3 1697 aa16.12■□□□□ 0.17
CDH3-207ENST00000568292 HECW2Q9P2P5 1572 aa16.12■□□□□ 0.17
CDH3-207ENST00000568292 SUPT6HQ7KZ85 1726 aaKnown RBP16.11■□□□□ 0.17
CDH3-207ENST00000568292 SYCP2Q9BX26 1530 aa16.11■□□□□ 0.17
CDH3-207ENST00000568292 PLPPR3Q6T4P5 718 aa16.1■□□□□ 0.17
CDH3-207ENST00000568292 ESF1Q9H501 851 aaKnown RBP16.09■□□□□ 0.17
CDH3-207ENST00000568292 MADDQ8WXG6 1647 aa16.08■□□□□ 0.17
CDH3-207ENST00000568292 DIP2CQ9Y2E4 1556 aa16.08■□□□□ 0.16
CDH3-207ENST00000568292 TSPY4P0CV99 314 aa16.07■□□□□ 0.16
CDH3-207ENST00000568292 TSPY10P0CW01 314 aa16.07■□□□□ 0.16
CDH3-207ENST00000568292 MBD5Q9P267 1494 aa16.07■□□□□ 0.16
CDH3-207ENST00000568292 SIGLEC1Q9BZZ2 1709 aa16.07■□□□□ 0.16
CDH3-207ENST00000568292 REREQ9P2R6 1566 aa16.06■□□□□ 0.16
CDH3-207ENST00000568292 KIDINS220Q9ULH0 1771 aa16.05■□□□□ 0.16
CDH3-207ENST00000568292 ABCA6Q8N139 1617 aa16.05■□□□□ 0.16
CDH3-207ENST00000568292 AGLP35573 1532 aa16.04■□□□□ 0.16
CDH3-207ENST00000568292 RTEL1-TNFRSF6BF6WH68 1400 aa16.04■□□□□ 0.16
CDH3-207ENST00000568292 RIMS1Q86UR5 1692 aaKnown RBP16.04■□□□□ 0.16
CDH3-207ENST00000568292 CEBPAP49715 358 aaPredicted RBP16.03■□□□□ 0.16
CDH3-207ENST00000568292 ATP7AQ04656 1500 aa16.02■□□□□ 0.15
CDH3-207ENST00000568292 CAMSAP2Q08AD1 1489 aa16.02■□□□□ 0.15
CDH3-207ENST00000568292 MIA2Q96PC5 1412 aa16.02■□□□□ 0.15
CDH3-207ENST00000568292 A2MP01023 1474 aa16.01■□□□□ 0.15
CDH3-207ENST00000568292 MYOM3Q5VTT5 1437 aa16.01■□□□□ 0.15
CDH3-207ENST00000568292 GGT6Q6P531 493 aa16■□□□□ 0.15
CDH3-207ENST00000568292 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
CDH3-207ENST00000568292 CCDC141Q6ZP82 1450 aa15.99■□□□□ 0.15
CDH3-207ENST00000568292 DHX29Q7Z478 1369 aaKnown RBP15.99■□□□□ 0.15
CDH3-207ENST00000568292 FER1L4A9Z1Z3 1794 aa15.98■□□□□ 0.15
CDH3-207ENST00000568292 INO80Q9ULG1 1556 aaPredicted RBP15.97■□□□□ 0.15
CDH3-207ENST00000568292 CNTLNQ9NXG0 1405 aa15.96■□□□□ 0.15
CDH3-207ENST00000568292 KIF3BO15066 747 aa15.95■□□□□ 0.14
CDH3-207ENST00000568292 ARHGEF5Q12774 1597 aa15.95■□□□□ 0.14
CDH3-207ENST00000568292 ZMYM3Q14202 1370 aa15.93■□□□□ 0.14
CDH3-207ENST00000568292 ADGBQ8N7X0 1667 aa15.92■□□□□ 0.14
CDH3-207ENST00000568292 LMTK3Q96Q04 1460 aa15.92■□□□□ 0.14
CDH3-207ENST00000568292 HSPA2P54652 639 aa15.92■□□□□ 0.14
CDH3-207ENST00000568292 PLXNC1O60486 1568 aa15.91■□□□□ 0.14
CDH3-207ENST00000568292 FGD6Q6ZV73 1430 aa15.88■□□□□ 0.13
CDH3-207ENST00000568292 UHRF1BP1Q6BDS2 1440 aa15.87■□□□□ 0.13
CDH3-207ENST00000568292 WASHC2CQ9Y4E1 1318 aa15.87■□□□□ 0.13
CDH3-207ENST00000568292 ABCC5O15440 1437 aa15.86■□□□□ 0.13
CDH3-207ENST00000568292 FAM50AQ14320 339 aaKnown RBP15.86■□□□□ 0.13
CDH3-207ENST00000568292 RRP7BPQ9NSQ0 103 aa15.86■□□□□ 0.13
CDH3-207ENST00000568292 MAST1Q9Y2H9 1570 aa15.86■□□□□ 0.13
CDH3-207ENST00000568292 PTPN23Q9H3S7 1636 aa15.86■□□□□ 0.13
CDH3-207ENST00000568292 C3P01024 1663 aa15.85■□□□□ 0.13
CDH3-207ENST00000568292 NPATQ14207 1427 aa15.85■□□□□ 0.13
CDH3-207ENST00000568292 TCOF1Q13428 1488 aaKnown RBP15.84■□□□□ 0.13
CDH3-207ENST00000568292 SETD1BQ9UPS6 1966 aaKnown RBP15.84■□□□□ 0.13
CDH3-207ENST00000568292 CHIC2Q9UKJ5 165 aa15.84■□□□□ 0.13
CDH3-207ENST00000568292 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
CDH3-207ENST00000568292 DAPK1P53355 1430 aa15.83■□□□□ 0.12
CDH3-207ENST00000568292 MROH2AA6NES4 1674 aa15.83■□□□□ 0.12
CDH3-207ENST00000568292 PPARGC1BQ86YN6 1023 aaKnown RBP15.82■□□□□ 0.12
CDH3-207ENST00000568292 PREX1Q8TCU6 1659 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms