RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 CLIP1P30622 1438 aa17.66■□□□□ 0.42
LINC01228-201ENST00000567966 PCF11O94913 1555 aaKnown RBP17.66■□□□□ 0.42
LINC01228-201ENST00000567966 MYO5CQ9NQX4 1742 aa17.65■□□□□ 0.42
LINC01228-201ENST00000567966 TROQ12816 1431 aaPredicted RBP17.64■□□□□ 0.42
LINC01228-201ENST00000567966 SIGLEC1Q9BZZ2 1709 aa17.64■□□□□ 0.41
LINC01228-201ENST00000567966 CDK11AQ9UQ88 783 aaPredicted RBP17.64■□□□□ 0.41
LINC01228-201ENST00000567966 ARID4BQ4LE39 1312 aaPredicted RBP17.64■□□□□ 0.41
LINC01228-201ENST00000567966 SCAPERQ9BY12 1400 aa17.64■□□□□ 0.41
LINC01228-201ENST00000567966 YEATS2Q9ULM3 1422 aa17.64■□□□□ 0.41
LINC01228-201ENST00000567966 ZMYM4Q5VZL5 1548 aa17.63■□□□□ 0.41
LINC01228-201ENST00000567966 PTPRMP28827 1452 aa17.62■□□□□ 0.41
LINC01228-201ENST00000567966 MADDQ8WXG6 1647 aa17.61■□□□□ 0.41
LINC01228-201ENST00000567966 CASKIN1Q8WXD9 1431 aa17.61■□□□□ 0.41
LINC01228-201ENST00000567966 ZFYVE16Q7Z3T8 1539 aa17.61■□□□□ 0.41
LINC01228-201ENST00000567966 EFCAB2Q5VUJ9 269 aa17.6■□□□□ 0.41
LINC01228-201ENST00000567966 CEP162Q5TB80 1403 aa17.6■□□□□ 0.41
LINC01228-201ENST00000567966 POGZQ7Z3K3 1410 aa17.6■□□□□ 0.41
LINC01228-201ENST00000567966 CDC42BPBQ9Y5S2 1711 aa17.58■□□□□ 0.4
LINC01228-201ENST00000567966 ARHGAP5Q13017 1502 aa17.57■□□□□ 0.4
LINC01228-201ENST00000567966 CCDC18Q5T9S5 1454 aa17.56■□□□□ 0.4
LINC01228-201ENST00000567966 RIMS1Q86UR5 1692 aaKnown RBP17.56■□□□□ 0.4
LINC01228-201ENST00000567966 MAGI2Q86UL8 1455 aa17.56■□□□□ 0.4
LINC01228-201ENST00000567966 FYCO1Q9BQS8 1478 aa17.54■□□□□ 0.4
LINC01228-201ENST00000567966 AFAP1Q8N556 730 aa17.53■□□□□ 0.4
LINC01228-201ENST00000567966 PREX2Q70Z35 1606 aa17.52■□□□□ 0.4
LINC01228-201ENST00000567966 MLECQ14165 292 aa17.51■□□□□ 0.39
LINC01228-201ENST00000567966 CDC42BPAQ5VT25 1732 aa17.5■□□□□ 0.39
LINC01228-201ENST00000567966 ARHGEF12Q9NZN5 1544 aa17.5■□□□□ 0.39
LINC01228-201ENST00000567966 ATP10AO60312 1499 aa17.5■□□□□ 0.39
LINC01228-201ENST00000567966 ZNF518AQ6AHZ1 1483 aa17.5■□□□□ 0.39
LINC01228-201ENST00000567966 KDM5CP41229 1560 aa17.49■□□□□ 0.39
LINC01228-201ENST00000567966 C9orf84Q5VXU9 1444 aa17.47■□□□□ 0.39
LINC01228-201ENST00000567966 ABCC1P33527 1531 aa17.47■□□□□ 0.39
LINC01228-201ENST00000567966 TRAPPC8Q9Y2L5 1435 aa17.47■□□□□ 0.39
LINC01228-201ENST00000567966 FER1L4A9Z1Z3 1794 aa17.46■□□□□ 0.39
LINC01228-201ENST00000567966 ILDR1Q86SU0 546 aaPredicted RBP17.46■□□□□ 0.39
LINC01228-201ENST00000567966 ITSN2Q9NZM3 1697 aa17.45■□□□□ 0.38
LINC01228-201ENST00000567966 DIP2CQ9Y2E4 1556 aa17.45■□□□□ 0.38
LINC01228-201ENST00000567966 LMTK3Q96Q04 1460 aa17.44■□□□□ 0.38
LINC01228-201ENST00000567966 ABCA6Q8N139 1617 aa17.44■□□□□ 0.38
LINC01228-201ENST00000567966 MYT1LQ9UL68 1186 aa17.44■□□□□ 0.38
LINC01228-201ENST00000567966 PPP4R3CPQ6ZMV5 832 aa17.43■□□□□ 0.38
LINC01228-201ENST00000567966 SAMD9LQ8IVG5 1584 aa17.42■□□□□ 0.38
LINC01228-201ENST00000567966 GPATCH8Q9UKJ3 1502 aaKnown RBP17.42■□□□□ 0.38
LINC01228-201ENST00000567966 ZNF777Q9ULD5 760 aaPredicted RBP17.41■□□□□ 0.38
LINC01228-201ENST00000567966 MLH3Q9UHC1 1453 aa17.41■□□□□ 0.38
LINC01228-201ENST00000567966 VPS8Q8N3P4 1428 aa17.4■□□□□ 0.38
LINC01228-201ENST00000567966 KIDINS220Q9ULH0 1771 aa17.4■□□□□ 0.38
LINC01228-201ENST00000567966 HSPA2P54652 639 aa17.39■□□□□ 0.37
LINC01228-201ENST00000567966 REREQ9P2R6 1566 aa17.38■□□□□ 0.37
LINC01228-201ENST00000567966 CEBPAP49715 358 aaPredicted RBP17.38■□□□□ 0.37
LINC01228-201ENST00000567966 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
LINC01228-201ENST00000567966 HNRNPMP52272 730 aaKnown RBP eCLIP17.37■□□□□ 0.37
LINC01228-201ENST00000567966 MTUS2Q5JR59 1369 aa17.37■□□□□ 0.37
LINC01228-201ENST00000567966 CCNB3Q8WWL7 1395 aa17.34■□□□□ 0.37
LINC01228-201ENST00000567966 APLP2Q06481 763 aa17.33■□□□□ 0.36
LINC01228-201ENST00000567966 CFDP1Q9UEE9 299 aaPredicted RBP17.33■□□□□ 0.36
LINC01228-201ENST00000567966 TIAM1Q13009 1591 aa17.32■□□□□ 0.36
LINC01228-201ENST00000567966 AGLP35573 1532 aa17.32■□□□□ 0.36
LINC01228-201ENST00000567966 ZNF644Q9H582 1327 aaPredicted RBP17.31■□□□□ 0.36
LINC01228-201ENST00000567966 EHBP1L1Q8N3D4 1523 aa17.31■□□□□ 0.36
LINC01228-201ENST00000567966 SPAG9O60271 1321 aaKnown RBP17.3■□□□□ 0.36
LINC01228-201ENST00000567966 KIAA1107Q9UPP5 1409 aa17.3■□□□□ 0.36
LINC01228-201ENST00000567966 C3P01024 1663 aa17.29■□□□□ 0.36
LINC01228-201ENST00000567966 PREX1Q8TCU6 1659 aa17.29■□□□□ 0.36
LINC01228-201ENST00000567966 MAP3K1Q13233 1512 aa17.28■□□□□ 0.36
LINC01228-201ENST00000567966 SUPT6HQ7KZ85 1726 aaKnown RBP17.28■□□□□ 0.36
LINC01228-201ENST00000567966 INO80Q9ULG1 1556 aaPredicted RBP17.28■□□□□ 0.36
LINC01228-201ENST00000567966 ATP7AQ04656 1500 aa17.27■□□□□ 0.36
LINC01228-201ENST00000567966 PLEKHH2Q8IVE3 1493 aa17.27■□□□□ 0.36
LINC01228-201ENST00000567966 MBD5Q9P267 1494 aa17.24■□□□□ 0.35
LINC01228-201ENST00000567966 NCOA2Q15596 1464 aa17.23■□□□□ 0.35
LINC01228-201ENST00000567966 ESF1Q9H501 851 aaKnown RBP17.22■□□□□ 0.35
LINC01228-201ENST00000567966 A2MP01023 1474 aa17.22■□□□□ 0.35
LINC01228-201ENST00000567966 PLXNC1O60486 1568 aa17.22■□□□□ 0.35
LINC01228-201ENST00000567966 UHRF1BP1Q6BDS2 1440 aa17.21■□□□□ 0.34
LINC01228-201ENST00000567966 SETD1BQ9UPS6 1966 aaKnown RBP17.2■□□□□ 0.34
LINC01228-201ENST00000567966 STRCQ7RTU9 1775 aa17.2■□□□□ 0.34
LINC01228-201ENST00000567966 FBXO41Q8TF61 875 aa17.19■□□□□ 0.34
LINC01228-201ENST00000567966 SCAF1Q9H7N4 1312 aaKnown RBP17.19■□□□□ 0.34
LINC01228-201ENST00000567966 MROH2AA6NES4 1674 aa17.18■□□□□ 0.34
LINC01228-201ENST00000567966 CLTCQ00610 1675 aaKnown RBP17.18■□□□□ 0.34
LINC01228-201ENST00000567966 ADGBQ8N7X0 1667 aa17.18■□□□□ 0.34
LINC01228-201ENST00000567966 KCNA4P22459 653 aa17.18■□□□□ 0.34
LINC01228-201ENST00000567966 CNTLNQ9NXG0 1405 aa17.18■□□□□ 0.34
LINC01228-201ENST00000567966 KANK4Q5T7N3 995 aaPredicted RBP17.17■□□□□ 0.34
LINC01228-201ENST00000567966 CAMSAP2Q08AD1 1489 aa17.17■□□□□ 0.34
LINC01228-201ENST00000567966 ZMYM3Q14202 1370 aa17.16■□□□□ 0.34
LINC01228-201ENST00000567966 GGT6Q6P531 493 aa17.16■□□□□ 0.34
LINC01228-201ENST00000567966 LRRC9Q6ZRR7 1453 aa17.16■□□□□ 0.34
LINC01228-201ENST00000567966 RTEL1-TNFRSF6BF6WH68 1400 aa17.14■□□□□ 0.33
LINC01228-201ENST00000567966 CCDC141Q6ZP82 1450 aa17.13■□□□□ 0.33
LINC01228-201ENST00000567966 DHX29Q7Z478 1369 aaKnown RBP17.11■□□□□ 0.33
LINC01228-201ENST00000567966 NPATQ14207 1427 aa17.11■□□□□ 0.33
LINC01228-201ENST00000567966 CERKQ8TCT0 537 aa17.1■□□□□ 0.33
LINC01228-201ENST00000567966 ARHGEF5Q12774 1597 aa17.09■□□□□ 0.33
LINC01228-201ENST00000567966 PTPRKQ15262 1439 aa17.08■□□□□ 0.32
LINC01228-201ENST00000567966 POTEDQ86YR6 584 aa17.08■□□□□ 0.32
LINC01228-201ENST00000567966 KIF3BO15066 747 aa17.07■□□□□ 0.32
LINC01228-201ENST00000567966 RSPH4AQ5TD94 716 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms