RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 MIA2Q96PC5 1412 aa15.78■□□□□ 0.12
TCF4-236ENST00000567880 CDC42BPBQ9Y5S2 1711 aa15.77■□□□□ 0.12
TCF4-236ENST00000567880 PREX2Q70Z35 1606 aa15.77■□□□□ 0.11
TCF4-236ENST00000567880 CFDP1Q9UEE9 299 aaPredicted RBP15.76■□□□□ 0.11
TCF4-236ENST00000567880 ZNF777Q9ULD5 760 aaPredicted RBP15.75■□□□□ 0.11
TCF4-236ENST00000567880 TCOF1Q13428 1488 aaKnown RBP15.75■□□□□ 0.11
TCF4-236ENST00000567880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.75■□□□□ 0.11
TCF4-236ENST00000567880 ZNF644Q9H582 1327 aaPredicted RBP15.74■□□□□ 0.11
TCF4-236ENST00000567880 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
TCF4-236ENST00000567880 CAMSAP2Q08AD1 1489 aa15.73■□□□□ 0.11
TCF4-236ENST00000567880 ARHGAP5Q13017 1502 aa15.72■□□□□ 0.11
TCF4-236ENST00000567880 MAPKBP1O60336 1514 aa15.71■□□□□ 0.11
TCF4-236ENST00000567880 ABCA9Q8IUA7 1624 aa15.71■□□□□ 0.11
TCF4-236ENST00000567880 DNMT1P26358 1616 aaKnown RBP15.68■□□□□ 0.1
TCF4-236ENST00000567880 SAMD9LQ8IVG5 1584 aa15.68■□□□□ 0.1
TCF4-236ENST00000567880 PLCH2O75038 1416 aa15.67■□□□□ 0.1
TCF4-236ENST00000567880 PTPRKQ15262 1439 aa15.66■□□□□ 0.1
TCF4-236ENST00000567880 DAPK1P53355 1430 aa15.65■□□□□ 0.1
TCF4-236ENST00000567880 CROCC2H7BZ55 1655 aa15.64■□□□□ 0.09
TCF4-236ENST00000567880 CHIC2Q9UKJ5 165 aa15.64■□□□□ 0.09
TCF4-236ENST00000567880 SYCP2Q9BX26 1530 aa15.62■□□□□ 0.09
TCF4-236ENST00000567880 ABCC5O15440 1437 aa15.62■□□□□ 0.09
TCF4-236ENST00000567880 EFCAB2Q5VUJ9 269 aa15.62■□□□□ 0.09
TCF4-236ENST00000567880 ARAP3Q8WWN8 1544 aa15.62■□□□□ 0.09
TCF4-236ENST00000567880 HNRNPMP52272 730 aaKnown RBP eCLIP15.61■□□□□ 0.097e-6■■■□□ 17
TCF4-236ENST00000567880 FANCAO15360 1455 aa15.61■□□□□ 0.09
TCF4-236ENST00000567880 CD109Q6YHK3 1445 aa15.6■□□□□ 0.09
TCF4-236ENST00000567880 DIP2BQ9P265 1576 aa15.6■□□□□ 0.09
TCF4-236ENST00000567880 ADGBQ8N7X0 1667 aa15.6■□□□□ 0.09
TCF4-236ENST00000567880 DNAJC5Q9H3Z4 198 aa15.6■□□□□ 0.09
TCF4-236ENST00000567880 DAXXQ9UER7 740 aaPredicted RBP15.59■□□□□ 0.09
TCF4-236ENST00000567880 TSPOAP1O95153 1857 aa15.59■□□□□ 0.09
TCF4-236ENST00000567880 ARHGEF5Q12774 1597 aa15.59■□□□□ 0.09
TCF4-236ENST00000567880 MAP3K4Q9Y6R4 1608 aa15.59■□□□□ 0.09
TCF4-236ENST00000567880 PLEKHH2Q8IVE3 1493 aa15.58■□□□□ 0.09
TCF4-236ENST00000567880 ABCC1P33527 1531 aa15.58■□□□□ 0.09
TCF4-236ENST00000567880 SETD5Q9C0A6 1442 aa15.58■□□□□ 0.08
TCF4-236ENST00000567880 RRP7BPQ9NSQ0 103 aa15.58■□□□□ 0.08
TCF4-236ENST00000567880 GCC2Q8IWJ2 1684 aa15.57■□□□□ 0.08
TCF4-236ENST00000567880 MBD5Q9P267 1494 aa15.57■□□□□ 0.08
TCF4-236ENST00000567880 KIF13AQ9H1H9 1805 aa15.57■□□□□ 0.08
TCF4-236ENST00000567880 GLI2P10070 1586 aa15.57■□□□□ 0.08
TCF4-236ENST00000567880 RAB3GAP2Q9H2M9 1393 aa15.57■□□□□ 0.08
TCF4-236ENST00000567880 CCDC141Q6ZP82 1450 aa15.57■□□□□ 0.08
TCF4-236ENST00000567880 FAM69CQ0P6D2 419 aa15.56■□□□□ 0.08
TCF4-236ENST00000567880 HFM1A2PYH4 1435 aa15.56■□□□□ 0.08
TCF4-236ENST00000567880 ARHGEF12Q9NZN5 1544 aa15.56■□□□□ 0.08
TCF4-236ENST00000567880 CFAP74Q9C0B2 1584 aa15.55■□□□□ 0.08
TCF4-236ENST00000567880 AKNAQ7Z591 1439 aa15.55■□□□□ 0.08
TCF4-236ENST00000567880 KIAA1107Q9UPP5 1409 aa15.55■□□□□ 0.08
TCF4-236ENST00000567880 CCER1Q8TC90 406 aaPredicted RBP15.55■□□□□ 0.08
TCF4-236ENST00000567880 ADGRL1O94910 1474 aa15.54■□□□□ 0.08
TCF4-236ENST00000567880 TSPY4P0CV99 314 aa15.54■□□□□ 0.08
TCF4-236ENST00000567880 TSPY10P0CW01 314 aa15.54■□□□□ 0.08
TCF4-236ENST00000567880 NAIPQ13075 1403 aa15.54■□□□□ 0.08
TCF4-236ENST00000567880 C9orf84Q5VXU9 1444 aa15.54■□□□□ 0.08
TCF4-236ENST00000567880 SHANK2Q9UPX8 1470 aa15.53■□□□□ 0.08
TCF4-236ENST00000567880 PRKCSHP14314 528 aaPredicted RBP15.53■□□□□ 0.08
TCF4-236ENST00000567880 ROCK1Q13464 1354 aa15.52■□□□□ 0.08
TCF4-236ENST00000567880 RSPH4AQ5TD94 716 aa15.52■□□□□ 0.07
TCF4-236ENST00000567880 ADRA2BP18089 450 aa15.51■□□□□ 0.07
TCF4-236ENST00000567880 TRAPPC8Q9Y2L5 1435 aa15.51■□□□□ 0.07
TCF4-236ENST00000567880 ADGRL2O95490 1459 aa15.5■□□□□ 0.07
TCF4-236ENST00000567880 SCAPERQ9BY12 1400 aa15.5■□□□□ 0.07
TCF4-236ENST00000567880 ANKRD30AQ9BXX3 1397 aa15.5■□□□□ 0.07
TCF4-236ENST00000567880 NCOA1Q15788 1441 aa15.5■□□□□ 0.07
TCF4-236ENST00000567880 KDM6BO15054 1643 aa15.5■□□□□ 0.07
TCF4-236ENST00000567880 PPRC1Q5VV67 1664 aaKnown RBP15.49■□□□□ 0.07
TCF4-236ENST00000567880 MAST1Q9Y2H9 1570 aa15.48■□□□□ 0.07
TCF4-236ENST00000567880 AFAP1Q8N556 730 aa15.48■□□□□ 0.07
TCF4-236ENST00000567880 NEO1Q92859 1461 aa15.47■□□□□ 0.07
TCF4-236ENST00000567880 DHX57Q6P158 1386 aaKnown RBP15.45■□□□□ 0.06
TCF4-236ENST00000567880 KIF15Q9NS87 1388 aa15.45■□□□□ 0.06
TCF4-236ENST00000567880 SPAG9O60271 1321 aaKnown RBP15.44■□□□□ 0.06
TCF4-236ENST00000567880 PLXNC1O60486 1568 aa15.44■□□□□ 0.06
TCF4-236ENST00000567880 MYT1LQ9UL68 1186 aa15.44■□□□□ 0.06
TCF4-236ENST00000567880 HRCP23327 699 aa15.43■□□□□ 0.06
TCF4-236ENST00000567880 ZNF518AQ6AHZ1 1483 aa15.43■□□□□ 0.06
TCF4-236ENST00000567880 TEX14Q8IWB6 1497 aa15.43■□□□□ 0.06
TCF4-236ENST00000567880 ZFYVE16Q7Z3T8 1539 aa15.43■□□□□ 0.06
TCF4-236ENST00000567880 INO80Q9ULG1 1556 aaPredicted RBP15.42■□□□□ 0.06
TCF4-236ENST00000567880 POGZQ7Z3K3 1410 aa15.42■□□□□ 0.06
TCF4-236ENST00000567880 ATP7AQ04656 1500 aa15.42■□□□□ 0.06
TCF4-236ENST00000567880 ANKRD50Q9ULJ7 1429 aa15.41■□□□□ 0.06
TCF4-236ENST00000567880 RICTORQ6R327 1708 aa15.41■□□□□ 0.06
TCF4-236ENST00000567880 TRIM52Q96A61 297 aa15.41■□□□□ 0.06
TCF4-236ENST00000567880 DENND4BO75064 1496 aaPredicted RBP15.4■□□□□ 0.06
TCF4-236ENST00000567880 KIDINS220Q9ULH0 1771 aa15.4■□□□□ 0.06
TCF4-236ENST00000567880 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
TCF4-236ENST00000567880 RTEL1-TNFRSF6BF6WH68 1400 aa15.39■□□□□ 0.05
TCF4-236ENST00000567880 KDM5CP41229 1560 aa15.39■□□□□ 0.05
TCF4-236ENST00000567880 RAPGEF3O95398 923 aa15.39■□□□□ 0.05
TCF4-236ENST00000567880 HECW2Q9P2P5 1572 aa15.38■□□□□ 0.05
TCF4-236ENST00000567880 DUOX2Q9NRD8 1548 aa15.37■□□□□ 0.05
TCF4-236ENST00000567880 FRMPD1Q5SYB0 1578 aa15.35■□□□□ 0.05
TCF4-236ENST00000567880 ZEB1P37275 1124 aaPredicted RBP15.33■□□□□ 0.05
TCF4-236ENST00000567880 MLH3Q9UHC1 1453 aa15.33■□□□□ 0.05
TCF4-236ENST00000567880 ABCA6Q8N139 1617 aa15.33■□□□□ 0.04
TCF4-236ENST00000567880 ERBINQ96RT1 1412 aa15.33■□□□□ 0.04
TCF4-236ENST00000567880 ACIN1Q9UKV3 1341 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms