RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 YEATS2Q9ULM3 1422 aa30.76■■■□□ 2.51
GTF3C1-207ENST00000567806 CLIP1P30622 1438 aa30.74■■■□□ 2.51
GTF3C1-207ENST00000567806 TROQ12816 1431 aaPredicted RBP30.74■■■□□ 2.51
GTF3C1-207ENST00000567806 MLECQ14165 292 aa30.72■■■□□ 2.51
GTF3C1-207ENST00000567806 PLPPR3Q6T4P5 718 aa30.72■■■□□ 2.51
GTF3C1-207ENST00000567806 KIF14Q15058 1648 aa30.68■■■□□ 2.5
GTF3C1-207ENST00000567806 MYO5CQ9NQX4 1742 aa30.67■■■□□ 2.5
GTF3C1-207ENST00000567806 RIMS1Q86UR5 1692 aaKnown RBP30.66■■■□□ 2.5
GTF3C1-207ENST00000567806 MYT1LQ9UL68 1186 aa30.66■■■□□ 2.5
GTF3C1-207ENST00000567806 ATP10AO60312 1499 aa30.64■■■□□ 2.5
GTF3C1-207ENST00000567806 ARHGAP5Q13017 1502 aa30.64■■■□□ 2.5
GTF3C1-207ENST00000567806 AFAP1Q8N556 730 aa30.63■■■□□ 2.49
GTF3C1-207ENST00000567806 CASKIN1Q8WXD9 1431 aa30.62■■■□□ 2.49
GTF3C1-207ENST00000567806 PCF11O94913 1555 aaKnown RBP30.62■■■□□ 2.49
GTF3C1-207ENST00000567806 ZNF518AQ6AHZ1 1483 aa30.59■■■□□ 2.49
GTF3C1-207ENST00000567806 CCDC18Q5T9S5 1454 aa30.58■■■□□ 2.49
GTF3C1-207ENST00000567806 LMTK3Q96Q04 1460 aa30.58■■■□□ 2.49
GTF3C1-207ENST00000567806 C9orf84Q5VXU9 1444 aa30.58■■■□□ 2.49
GTF3C1-207ENST00000567806 SIGLEC1Q9BZZ2 1709 aa30.56■■■□□ 2.48
GTF3C1-207ENST00000567806 LRRIQ1Q96JM4 1722 aa30.56■■■□□ 2.48
GTF3C1-207ENST00000567806 HSPA2P54652 639 aa30.53■■■□□ 2.48
GTF3C1-207ENST00000567806 FBXO41Q8TF61 875 aa30.5■■■□□ 2.47
GTF3C1-207ENST00000567806 FER1L4A9Z1Z3 1794 aa30.46■■■□□ 2.47
GTF3C1-207ENST00000567806 KDM5CP41229 1560 aa30.46■■■□□ 2.47
GTF3C1-207ENST00000567806 FYCO1Q9BQS8 1478 aa30.46■■■□□ 2.47
GTF3C1-207ENST00000567806 ARHGEF12Q9NZN5 1544 aa30.46■■■□□ 2.47
GTF3C1-207ENST00000567806 CDC42BPBQ9Y5S2 1711 aa30.45■■■□□ 2.47
GTF3C1-207ENST00000567806 CEBPAP49715 358 aaPredicted RBP30.44■■■□□ 2.46
GTF3C1-207ENST00000567806 ZNF777Q9ULD5 760 aaPredicted RBP30.43■■■□□ 2.46
GTF3C1-207ENST00000567806 MLH3Q9UHC1 1453 aa30.43■■■□□ 2.46
GTF3C1-207ENST00000567806 TRAPPC8Q9Y2L5 1435 aa30.42■■■□□ 2.46
GTF3C1-207ENST00000567806 PREX2Q70Z35 1606 aa30.41■■■□□ 2.46
GTF3C1-207ENST00000567806 ESF1Q9H501 851 aaKnown RBP30.38■■■□□ 2.45
GTF3C1-207ENST00000567806 ABCC1P33527 1531 aa30.37■■■□□ 2.45
GTF3C1-207ENST00000567806 DIP2CQ9Y2E4 1556 aa30.37■■■□□ 2.45
GTF3C1-207ENST00000567806 REREQ9P2R6 1566 aa30.32■■■□□ 2.45
GTF3C1-207ENST00000567806 CDC42BPAQ5VT25 1732 aa30.3■■■□□ 2.44
GTF3C1-207ENST00000567806 ABCA6Q8N139 1617 aa30.3■■■□□ 2.44
GTF3C1-207ENST00000567806 HNRNPMP52272 730 aaKnown RBP eCLIP30.3■■■□□ 2.44
GTF3C1-207ENST00000567806 CFDP1Q9UEE9 299 aaPredicted RBP30.3■■■□□ 2.44
GTF3C1-207ENST00000567806 GPATCH8Q9UKJ3 1502 aaKnown RBP30.3■■■□□ 2.44
GTF3C1-207ENST00000567806 ITSN2Q9NZM3 1697 aa30.3■■■□□ 2.44
GTF3C1-207ENST00000567806 AGLP35573 1532 aa30.27■■■□□ 2.44
GTF3C1-207ENST00000567806 SPAG9O60271 1321 aaKnown RBP30.27■■■□□ 2.44
GTF3C1-207ENST00000567806 MTUS2Q5JR59 1369 aa30.27■■■□□ 2.44
GTF3C1-207ENST00000567806 CCNB3Q8WWL7 1395 aa30.27■■■□□ 2.44
GTF3C1-207ENST00000567806 PREX1Q8TCU6 1659 aa30.23■■■□□ 2.43
GTF3C1-207ENST00000567806 UHRF1BP1Q6BDS2 1440 aa30.23■■■□□ 2.43
GTF3C1-207ENST00000567806 DMRT2Q9Y5R5 561 aa30.22■■■□□ 2.43
GTF3C1-207ENST00000567806 KIDINS220Q9ULH0 1771 aa30.22■■■□□ 2.43
GTF3C1-207ENST00000567806 SAMD9LQ8IVG5 1584 aa30.21■■■□□ 2.43
GTF3C1-207ENST00000567806 CERKQ8TCT0 537 aa30.2■■■□□ 2.43
GTF3C1-207ENST00000567806 SYCP2Q9BX26 1530 aa30.2■■■□□ 2.42
GTF3C1-207ENST00000567806 KIAA1107Q9UPP5 1409 aa30.2■■■□□ 2.42
GTF3C1-207ENST00000567806 PLEKHH2Q8IVE3 1493 aa30.19■■■□□ 2.42
GTF3C1-207ENST00000567806 SETD1BQ9UPS6 1966 aaKnown RBP30.19■■■□□ 2.42
GTF3C1-207ENST00000567806 CNTLNQ9NXG0 1405 aa30.17■■■□□ 2.42
GTF3C1-207ENST00000567806 C3P01024 1663 aa30.12■■■□□ 2.41
GTF3C1-207ENST00000567806 CEP162Q5TB80 1403 aa30.1■■■□□ 2.41
GTF3C1-207ENST00000567806 ATP7AQ04656 1500 aa30.08■■■□□ 2.41
GTF3C1-207ENST00000567806 ZNF644Q9H582 1327 aaPredicted RBP30.08■■■□□ 2.41
GTF3C1-207ENST00000567806 ZMYM3Q14202 1370 aa30.06■■■□□ 2.4
GTF3C1-207ENST00000567806 A2MP01023 1474 aa30.06■■■□□ 2.4
GTF3C1-207ENST00000567806 GGT6Q6P531 493 aa30.05■■■□□ 2.4
GTF3C1-207ENST00000567806 EHBP1L1Q8N3D4 1523 aa30.04■■■□□ 2.4
GTF3C1-207ENST00000567806 SUPT6HQ7KZ85 1726 aaKnown RBP30.03■■■□□ 2.4
GTF3C1-207ENST00000567806 STRCQ7RTU9 1775 aa30.03■■■□□ 2.4
GTF3C1-207ENST00000567806 TIAM1Q13009 1591 aa30■■■□□ 2.39
GTF3C1-207ENST00000567806 NPATQ14207 1427 aa30■■■□□ 2.39
GTF3C1-207ENST00000567806 INO80Q9ULG1 1556 aaPredicted RBP29.99■■■□□ 2.39
GTF3C1-207ENST00000567806 PPP6R1Q9UPN7 881 aa29.99■■■□□ 2.39
GTF3C1-207ENST00000567806 PTPRTO14522 1441 aa29.98■■■□□ 2.39
GTF3C1-207ENST00000567806 MBD5Q9P267 1494 aa29.97■■■□□ 2.39
GTF3C1-207ENST00000567806 MROH2AA6NES4 1674 aa29.95■■■□□ 2.39
GTF3C1-207ENST00000567806 PLXNC1O60486 1568 aa29.94■■■□□ 2.38
GTF3C1-207ENST00000567806 RTEL1-TNFRSF6BF6WH68 1400 aa29.94■■■□□ 2.38
GTF3C1-207ENST00000567806 RSPH4AQ5TD94 716 aa29.93■■■□□ 2.38
GTF3C1-207ENST00000567806 LOC105371045A0A1W2PR82 267 aa29.91■■■□□ 2.38
GTF3C1-207ENST00000567806 NCOA1Q15788 1441 aa29.9■■■□□ 2.38
GTF3C1-207ENST00000567806 NCOA2Q15596 1464 aa29.9■■■□□ 2.38
GTF3C1-207ENST00000567806 DHX29Q7Z478 1369 aaKnown RBP29.9■■■□□ 2.38
GTF3C1-207ENST00000567806 CLTCQ00610 1675 aaKnown RBP29.89■■■□□ 2.38
GTF3C1-207ENST00000567806 ADGBQ8N7X0 1667 aa29.89■■■□□ 2.38
GTF3C1-207ENST00000567806 KIF3BO15066 747 aa29.86■■■□□ 2.37
GTF3C1-207ENST00000567806 PTPRKQ15262 1439 aa29.86■■■□□ 2.37
GTF3C1-207ENST00000567806 NCKAP5LQ9HCH0 1330 aa29.85■■■□□ 2.37
GTF3C1-207ENST00000567806 TSPY4P0CV99 314 aa29.84■■■□□ 2.37
GTF3C1-207ENST00000567806 TSPY10P0CW01 314 aa29.84■■■□□ 2.37
GTF3C1-207ENST00000567806 CAMSAP1Q5T5Y3 1602 aa29.84■■■□□ 2.37
GTF3C1-207ENST00000567806 CCDC141Q6ZP82 1450 aa29.83■■■□□ 2.37
GTF3C1-207ENST00000567806 CAMSAP2Q08AD1 1489 aa29.82■■■□□ 2.36
GTF3C1-207ENST00000567806 PKD2Q13563 968 aa29.8■■■□□ 2.36
GTF3C1-207ENST00000567806 VPS8Q8N3P4 1428 aa29.79■■■□□ 2.36
GTF3C1-207ENST00000567806 WASHC2CQ9Y4E1 1318 aa29.75■■■□□ 2.35
GTF3C1-207ENST00000567806 LRRC9Q6ZRR7 1453 aa29.74■■■□□ 2.35
GTF3C1-207ENST00000567806 MYO3AQ8NEV4 1616 aa29.73■■■□□ 2.35
GTF3C1-207ENST00000567806 LTBP4Q8N2S1 1624 aa29.72■■■□□ 2.35
GTF3C1-207ENST00000567806 PLA2R1Q13018 1463 aa29.72■■■□□ 2.35
GTF3C1-207ENST00000567806 CEP170BQ9Y4F5 1589 aaPredicted RBP29.72■■■□□ 2.35
GTF3C1-207ENST00000567806 FBXO31Q5XUX0 539 aaPredicted RBP29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms