RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 SCAPERQ9BY12 1400 aa38.04■■■■□ 3.68
CNEP1R1-209ENST00000567712 KIF14Q15058 1648 aa38.03■■■■□ 3.68
CNEP1R1-209ENST00000567712 LRRIQ1Q96JM4 1722 aa38.03■■■■□ 3.68
CNEP1R1-209ENST00000567712 MYO5CQ9NQX4 1742 aa38.01■■■■□ 3.67
CNEP1R1-209ENST00000567712 POGZQ7Z3K3 1410 aa38■■■■□ 3.67
CNEP1R1-209ENST00000567712 MAGI2Q86UL8 1455 aa37.98■■■■□ 3.67
CNEP1R1-209ENST00000567712 PLPPR3Q6T4P5 718 aa37.94■■■■□ 3.66
CNEP1R1-209ENST00000567712 MLECQ14165 292 aa37.92■■■■□ 3.66
CNEP1R1-209ENST00000567712 EFCAB2Q5VUJ9 269 aa37.89■■■■□ 3.66
CNEP1R1-209ENST00000567712 FER1L4A9Z1Z3 1794 aa37.88■■■■□ 3.66
CNEP1R1-209ENST00000567712 TROQ12816 1431 aaPredicted RBP37.88■■■■□ 3.66
CNEP1R1-209ENST00000567712 HSPA2P54652 639 aa37.86■■■■□ 3.65
CNEP1R1-209ENST00000567712 CDK11AQ9UQ88 783 aaPredicted RBP37.86■■■■□ 3.65
CNEP1R1-209ENST00000567712 ATP10AO60312 1499 aa37.84■■■■□ 3.65
CNEP1R1-209ENST00000567712 FBXO41Q8TF61 875 aa37.82■■■■□ 3.64
CNEP1R1-209ENST00000567712 CDC42BPBQ9Y5S2 1711 aa37.8■■■■□ 3.64
CNEP1R1-209ENST00000567712 ARHGAP5Q13017 1502 aa37.8■■■■□ 3.64
CNEP1R1-209ENST00000567712 C9orf84Q5VXU9 1444 aa37.78■■■■□ 3.64
CNEP1R1-209ENST00000567712 ARHGEF12Q9NZN5 1544 aa37.78■■■■□ 3.64
CNEP1R1-209ENST00000567712 AFAP1Q8N556 730 aa37.77■■■■□ 3.64
CNEP1R1-209ENST00000567712 KDM5CP41229 1560 aa37.76■■■■□ 3.63
CNEP1R1-209ENST00000567712 ZNF518AQ6AHZ1 1483 aa37.73■■■■□ 3.63
CNEP1R1-209ENST00000567712 CLIP1P30622 1438 aa37.73■■■■□ 3.63
CNEP1R1-209ENST00000567712 CASKIN1Q8WXD9 1431 aa37.69■■■■□ 3.62
CNEP1R1-209ENST00000567712 DIP2CQ9Y2E4 1556 aa37.67■■■■□ 3.62
CNEP1R1-209ENST00000567712 CEBPAP49715 358 aaPredicted RBP37.66■■■■□ 3.62
CNEP1R1-209ENST00000567712 PREX2Q70Z35 1606 aa37.65■■■■□ 3.62
CNEP1R1-209ENST00000567712 ABCA6Q8N139 1617 aa37.62■■■■□ 3.61
CNEP1R1-209ENST00000567712 TRAPPC8Q9Y2L5 1435 aa37.61■■■■□ 3.61
CNEP1R1-209ENST00000567712 CCDC18Q5T9S5 1454 aa37.6■■■■□ 3.61
CNEP1R1-209ENST00000567712 CDC42BPAQ5VT25 1732 aa37.59■■■■□ 3.61
CNEP1R1-209ENST00000567712 ABCC1P33527 1531 aa37.59■■■■□ 3.61
CNEP1R1-209ENST00000567712 ITSN2Q9NZM3 1697 aa37.59■■■■□ 3.61
CNEP1R1-209ENST00000567712 PREX1Q8TCU6 1659 aa37.57■■■■□ 3.61
CNEP1R1-209ENST00000567712 MYT1LQ9UL68 1186 aa37.57■■■■□ 3.6
CNEP1R1-209ENST00000567712 MLH3Q9UHC1 1453 aa37.56■■■■□ 3.6
CNEP1R1-209ENST00000567712 REREQ9P2R6 1566 aa37.55■■■■□ 3.6
CNEP1R1-209ENST00000567712 KIDINS220Q9ULH0 1771 aa37.51■■■■□ 3.6
CNEP1R1-209ENST00000567712 FYCO1Q9BQS8 1478 aa37.49■■■■□ 3.59
CNEP1R1-209ENST00000567712 SETD1BQ9UPS6 1966 aaKnown RBP37.48■■■■□ 3.59
CNEP1R1-209ENST00000567712 STRCQ7RTU9 1775 aa37.45■■■■□ 3.59
CNEP1R1-209ENST00000567712 C3P01024 1663 aa37.45■■■■□ 3.59
CNEP1R1-209ENST00000567712 AGLP35573 1532 aa37.43■■■■□ 3.58
CNEP1R1-209ENST00000567712 SAMD9LQ8IVG5 1584 aa37.42■■■■□ 3.58
CNEP1R1-209ENST00000567712 CERKQ8TCT0 537 aa37.39■■■■□ 3.58
CNEP1R1-209ENST00000567712 GPATCH8Q9UKJ3 1502 aaKnown RBP37.38■■■■□ 3.57
CNEP1R1-209ENST00000567712 ZNF777Q9ULD5 760 aaPredicted RBP37.37■■■■□ 3.57
CNEP1R1-209ENST00000567712 UHRF1BP1Q6BDS2 1440 aa37.36■■■■□ 3.57
CNEP1R1-209ENST00000567712 SYCP2Q9BX26 1530 aa37.35■■■■□ 3.57
CNEP1R1-209ENST00000567712 HNRNPMP52272 730 aaKnown RBP eCLIP37.3■■■■□ 3.56
CNEP1R1-209ENST00000567712 SUPT6HQ7KZ85 1726 aaKnown RBP37.24■■■■□ 3.55
CNEP1R1-209ENST00000567712 ESF1Q9H501 851 aaKnown RBP37.22■■■■□ 3.55
CNEP1R1-209ENST00000567712 SPAG9O60271 1321 aaKnown RBP37.21■■■■□ 3.55
CNEP1R1-209ENST00000567712 CFDP1Q9UEE9 299 aaPredicted RBP37.18■■■■□ 3.54
CNEP1R1-209ENST00000567712 ATP7AQ04656 1500 aa37.18■■■■□ 3.54
CNEP1R1-209ENST00000567712 KIAA1107Q9UPP5 1409 aa37.18■■■■□ 3.54
CNEP1R1-209ENST00000567712 INO80Q9ULG1 1556 aaPredicted RBP37.17■■■■□ 3.54
CNEP1R1-209ENST00000567712 CNTLNQ9NXG0 1405 aa37.17■■■■□ 3.54
CNEP1R1-209ENST00000567712 DMRT2Q9Y5R5 561 aa37.16■■■■□ 3.54
CNEP1R1-209ENST00000567712 CCNB3Q8WWL7 1395 aa37.16■■■■□ 3.54
CNEP1R1-209ENST00000567712 MROH2AA6NES4 1674 aa37.15■■■■□ 3.54
CNEP1R1-209ENST00000567712 PLXNC1O60486 1568 aa37.13■■■■□ 3.53
CNEP1R1-209ENST00000567712 MTUS2Q5JR59 1369 aa37.13■■■■□ 3.53
CNEP1R1-209ENST00000567712 ZNF644Q9H582 1327 aaPredicted RBP37.1■■■■□ 3.53
CNEP1R1-209ENST00000567712 TIAM1Q13009 1591 aa37.1■■■■□ 3.53
CNEP1R1-209ENST00000567712 PLEKHH2Q8IVE3 1493 aa37.1■■■■□ 3.53
CNEP1R1-209ENST00000567712 ZMYM3Q14202 1370 aa37.1■■■■□ 3.53
CNEP1R1-209ENST00000567712 PTPRTO14522 1441 aa37.1■■■■□ 3.53
CNEP1R1-209ENST00000567712 CLTCQ00610 1675 aaKnown RBP37.09■■■■□ 3.53
CNEP1R1-209ENST00000567712 A2MP01023 1474 aa37.07■■■■□ 3.53
CNEP1R1-209ENST00000567712 NCOA1Q15788 1441 aa37.06■■■■□ 3.52
CNEP1R1-209ENST00000567712 NPATQ14207 1427 aa37.04■■■■□ 3.52
CNEP1R1-209ENST00000567712 MBD5Q9P267 1494 aa37.01■■■■□ 3.52
CNEP1R1-209ENST00000567712 EHBP1L1Q8N3D4 1523 aa37.01■■■■□ 3.52
CNEP1R1-209ENST00000567712 CAMSAP1Q5T5Y3 1602 aa37■■■■□ 3.51
CNEP1R1-209ENST00000567712 LTBP4Q8N2S1 1624 aa37■■■■□ 3.51
CNEP1R1-209ENST00000567712 ADGBQ8N7X0 1667 aa36.99■■■■□ 3.51
CNEP1R1-209ENST00000567712 GGT6Q6P531 493 aa36.97■■■■□ 3.51
CNEP1R1-209ENST00000567712 CEP162Q5TB80 1403 aa36.95■■■■□ 3.51
CNEP1R1-209ENST00000567712 PTPRKQ15262 1439 aa36.94■■■■□ 3.5
CNEP1R1-209ENST00000567712 MYO3AQ8NEV4 1616 aa36.93■■■■□ 3.5
CNEP1R1-209ENST00000567712 ZNF142P52746 1687 aaPredicted RBP36.9■■■■□ 3.5
CNEP1R1-209ENST00000567712 NCKAP5LQ9HCH0 1330 aa36.89■■■■□ 3.5
CNEP1R1-209ENST00000567712 CEP170BQ9Y4F5 1589 aaPredicted RBP36.85■■■■□ 3.49
CNEP1R1-209ENST00000567712 RTEL1-TNFRSF6BF6WH68 1400 aa36.85■■■■□ 3.49
CNEP1R1-209ENST00000567712 NCOA2Q15596 1464 aa36.83■■■■□ 3.49
CNEP1R1-209ENST00000567712 DHX29Q7Z478 1369 aaKnown RBP36.8■■■■□ 3.48
CNEP1R1-209ENST00000567712 PPP6R1Q9UPN7 881 aa36.79■■■■□ 3.48
CNEP1R1-209ENST00000567712 CAMSAP2Q08AD1 1489 aa36.79■■■■□ 3.48
CNEP1R1-209ENST00000567712 PLA2R1Q13018 1463 aa36.77■■■■□ 3.48
CNEP1R1-209ENST00000567712 ZNF335Q9H4Z2 1342 aaPredicted RBP36.76■■■■□ 3.47
CNEP1R1-209ENST00000567712 TCOF1Q13428 1488 aaKnown RBP36.75■■■■□ 3.47
CNEP1R1-209ENST00000567712 CCDC141Q6ZP82 1450 aa36.75■■■■□ 3.47
CNEP1R1-209ENST00000567712 IQSEC2Q5JU85 1478 aa36.73■■■■□ 3.47
CNEP1R1-209ENST00000567712 KIF3BO15066 747 aa36.71■■■■□ 3.47
CNEP1R1-209ENST00000567712 DNMT1P26358 1616 aaKnown RBP36.7■■■■□ 3.47
CNEP1R1-209ENST00000567712 PKD2Q13563 968 aa36.7■■■■□ 3.47
CNEP1R1-209ENST00000567712 FBXO31Q5XUX0 539 aaPredicted RBP36.7■■■■□ 3.47
CNEP1R1-209ENST00000567712 A2ML1A8K2U0 1454 aa36.68■■■■□ 3.46
CNEP1R1-209ENST00000567712 DISP3Q9P2K9 1392 aa36.66■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms