RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-223ENST00000567284 PTPN23Q9H3S7 1636 aa14.37□□□□□ -0.11
FANCA-223ENST00000567284 CFDP1Q9UEE9 299 aaPredicted RBP14.36□□□□□ -0.11
FANCA-223ENST00000567284 FAM50AQ14320 339 aaKnown RBP14.35□□□□□ -0.11
FANCA-223ENST00000567284 PPRC1Q5VV67 1664 aaKnown RBP14.35□□□□□ -0.11
FANCA-223ENST00000567284 PLCH2O75038 1416 aa14.34□□□□□ -0.11
FANCA-223ENST00000567284 FGD6Q6ZV73 1430 aa14.34□□□□□ -0.11
FANCA-223ENST00000567284 SAMD9LQ8IVG5 1584 aa14.32□□□□□ -0.12
FANCA-223ENST00000567284 CFAP74Q9C0B2 1584 aa14.32□□□□□ -0.12
FANCA-223ENST00000567284 ZNF644Q9H582 1327 aaPredicted RBP14.32□□□□□ -0.12
FANCA-223ENST00000567284 EFCAB2Q5VUJ9 269 aa14.31□□□□□ -0.12
FANCA-223ENST00000567284 MIA2Q96PC5 1412 aa14.31□□□□□ -0.12
FANCA-223ENST00000567284 FANCAO15360 1455 aa14.31□□□□□ -0.12
FANCA-223ENST00000567284 CAMSAP2Q08AD1 1489 aa14.31□□□□□ -0.12
FANCA-223ENST00000567284 ITGAEP38570 1179 aa14.3□□□□□ -0.12
FANCA-223ENST00000567284 RRBP1Q9P2E9 1410 aaKnown RBP14.29□□□□□ -0.12
FANCA-223ENST00000567284 ARAP3Q8WWN8 1544 aa14.29□□□□□ -0.12
FANCA-223ENST00000567284 SYCP2Q9BX26 1530 aa14.27□□□□□ -0.12
FANCA-223ENST00000567284 HNRNPMP52272 730 aaKnown RBP eCLIP14.27□□□□□ -0.13
FANCA-223ENST00000567284 TRIM26Q12899 539 aaPredicted RBP14.27□□□□□ -0.13
FANCA-223ENST00000567284 TCOF1Q13428 1488 aaKnown RBP14.26□□□□□ -0.13
FANCA-223ENST00000567284 TEX14Q8IWB6 1497 aa14.26□□□□□ -0.13
FANCA-223ENST00000567284 AKNAQ7Z591 1439 aa14.26□□□□□ -0.13
FANCA-223ENST00000567284 ABCC1P33527 1531 aa14.25□□□□□ -0.13
FANCA-223ENST00000567284 ADGRL1O94910 1474 aa14.25□□□□□ -0.13
FANCA-223ENST00000567284 CROCC2H7BZ55 1655 aa14.23□□□□□ -0.13
FANCA-223ENST00000567284 DNMT1P26358 1616 aaKnown RBP14.23□□□□□ -0.13
FANCA-223ENST00000567284 PLEKHH2Q8IVE3 1493 aa14.23□□□□□ -0.13
FANCA-223ENST00000567284 NEO1Q92859 1461 aa14.23□□□□□ -0.13
FANCA-223ENST00000567284 SCAPERQ9BY12 1400 aa14.23□□□□□ -0.13
FANCA-223ENST00000567284 ARHGEF12Q9NZN5 1544 aa14.22□□□□□ -0.13
FANCA-223ENST00000567284 MYT1LQ9UL68 1186 aa14.21□□□□□ -0.13
FANCA-223ENST00000567284 PCGF6Q9BYE7 350 aa14.2□□□□□ -0.14
FANCA-223ENST00000567284 CHIC2Q9UKJ5 165 aa14.2□□□□□ -0.14
FANCA-223ENST00000567284 DAPK1P53355 1430 aa14.2□□□□□ -0.14
FANCA-223ENST00000567284 ARHGEF5Q12774 1597 aa14.2□□□□□ -0.14
FANCA-223ENST00000567284 RICTORQ6R327 1708 aa14.2□□□□□ -0.14
FANCA-223ENST00000567284 TRAPPC8Q9Y2L5 1435 aa14.19□□□□□ -0.14
FANCA-223ENST00000567284 ADGBQ8N7X0 1667 aa14.19□□□□□ -0.14
FANCA-223ENST00000567284 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.19□□□□□ -0.14
FANCA-223ENST00000567284 CCDC141Q6ZP82 1450 aa14.18□□□□□ -0.14
FANCA-223ENST00000567284 MBD5Q9P267 1494 aa14.18□□□□□ -0.14
FANCA-223ENST00000567284 ABCC5O15440 1437 aa14.18□□□□□ -0.14
FANCA-223ENST00000567284 KIAA1107Q9UPP5 1409 aa14.18□□□□□ -0.14
FANCA-223ENST00000567284 DENND4BO75064 1496 aaPredicted RBP14.18□□□□□ -0.14
FANCA-223ENST00000567284 RAPGEF3O95398 923 aa14.17□□□□□ -0.14
FANCA-223ENST00000567284 AFAP1Q8N556 730 aa14.17□□□□□ -0.14
FANCA-223ENST00000567284 KDM6BO15054 1643 aa14.16□□□□□ -0.14
FANCA-223ENST00000567284 TSPY4P0CV99 314 aa14.16□□□□□ -0.14
FANCA-223ENST00000567284 TSPY10P0CW01 314 aa14.16□□□□□ -0.14
FANCA-223ENST00000567284 PTPRKQ15262 1439 aa14.15□□□□□ -0.14
FANCA-223ENST00000567284 FRMPD1Q5SYB0 1578 aa14.15□□□□□ -0.14
FANCA-223ENST00000567284 POGZQ7Z3K3 1410 aa14.15□□□□□ -0.14
FANCA-223ENST00000567284 RSPH4AQ5TD94 716 aa14.14□□□□□ -0.15
FANCA-223ENST00000567284 SPAG9O60271 1321 aaKnown RBP14.14□□□□□ -0.15
FANCA-223ENST00000567284 ZNF518AQ6AHZ1 1483 aa14.13□□□□□ -0.15
FANCA-223ENST00000567284 RRP7BPQ9NSQ0 103 aa14.13□□□□□ -0.15
FANCA-223ENST00000567284 C9orf84Q5VXU9 1444 aa14.13□□□□□ -0.15
FANCA-223ENST00000567284 COL17A1Q9UMD9 1497 aaPredicted RBP14.12□□□□□ -0.15
FANCA-223ENST00000567284 KIDINS220Q9ULH0 1771 aa14.12□□□□□ -0.15
FANCA-223ENST00000567284 HECW2Q9P2P5 1572 aa14.12□□□□□ -0.15
FANCA-223ENST00000567284 MAST1Q9Y2H9 1570 aa14.12□□□□□ -0.15
FANCA-223ENST00000567284 KDM5CP41229 1560 aa14.11□□□□□ -0.15
FANCA-223ENST00000567284 SHANK2Q9UPX8 1470 aa14.11□□□□□ -0.15
FANCA-223ENST00000567284 ATP7AQ04656 1500 aa14.1□□□□□ -0.15
FANCA-223ENST00000567284 INO80Q9ULG1 1556 aaPredicted RBP14.1□□□□□ -0.15
FANCA-223ENST00000567284 GCC2Q8IWJ2 1684 aa14.09□□□□□ -0.15
FANCA-223ENST00000567284 ZFYVE16Q7Z3T8 1539 aa14.09□□□□□ -0.15
FANCA-223ENST00000567284 ABCA6Q8N139 1617 aa14.08□□□□□ -0.16
FANCA-223ENST00000567284 ANKRD30AQ9BXX3 1397 aa14.08□□□□□ -0.16
FANCA-223ENST00000567284 PLXNC1O60486 1568 aa14.07□□□□□ -0.16
FANCA-223ENST00000567284 ADGRL2O95490 1459 aa14.06□□□□□ -0.16
FANCA-223ENST00000567284 ZMYM4Q5VZL5 1548 aa14.06□□□□□ -0.16
FANCA-223ENST00000567284 RTEL1-TNFRSF6BF6WH68 1400 aa14.05□□□□□ -0.16
FANCA-223ENST00000567284 NCOA1Q15788 1441 aa14.05□□□□□ -0.16
FANCA-223ENST00000567284 YEATS2Q9ULM3 1422 aa14.05□□□□□ -0.16
FANCA-223ENST00000567284 MLH3Q9UHC1 1453 aa14.05□□□□□ -0.16
FANCA-223ENST00000567284 ROCK1Q13464 1354 aa14.04□□□□□ -0.16
FANCA-223ENST00000567284 KIF15Q9NS87 1388 aa14.04□□□□□ -0.16
FANCA-223ENST00000567284 DIP2CQ9Y2E4 1556 aa14.04□□□□□ -0.16
FANCA-223ENST00000567284 NAIPQ13075 1403 aa14.02□□□□□ -0.16
FANCA-223ENST00000567284 SETD5Q9C0A6 1442 aa14.02□□□□□ -0.16
FANCA-223ENST00000567284 ARHGEF40Q8TER5 1519 aa14.01□□□□□ -0.17
FANCA-223ENST00000567284 DUOX2Q9NRD8 1548 aa14.01□□□□□ -0.17
FANCA-223ENST00000567284 MAGI2Q86UL8 1455 aa14□□□□□ -0.17
FANCA-223ENST00000567284 HFM1A2PYH4 1435 aa14□□□□□ -0.17
FANCA-223ENST00000567284 A2MP01023 1474 aa13.99□□□□□ -0.17
FANCA-223ENST00000567284 ANKRD50Q9ULJ7 1429 aa13.98□□□□□ -0.17
FANCA-223ENST00000567284 SIGLEC1Q9BZZ2 1709 aa13.98□□□□□ -0.17
FANCA-223ENST00000567284 RAB3GAP2Q9H2M9 1393 aa13.98□□□□□ -0.17
FANCA-223ENST00000567284 ATP10AO60312 1499 aa13.98□□□□□ -0.17
FANCA-223ENST00000567284 DHX29Q7Z478 1369 aaKnown RBP13.96□□□□□ -0.17
FANCA-223ENST00000567284 TRIM52Q96A61 297 aa13.96□□□□□ -0.17
FANCA-223ENST00000567284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.96□□□□□ -0.173e-7■■■□□ 14.8
FANCA-223ENST00000567284 EIF2AK4Q9P2K8 1649 aaKnown RBP13.95□□□□□ -0.18
FANCA-223ENST00000567284 KIF3BO15066 747 aa13.95□□□□□ -0.18
FANCA-223ENST00000567284 ERBINQ96RT1 1412 aa13.95□□□□□ -0.18
FANCA-223ENST00000567284 ARID4BQ4LE39 1312 aaPredicted RBP13.94□□□□□ -0.18
FANCA-223ENST00000567284 CEP152O94986 1710 aa13.93□□□□□ -0.18
FANCA-223ENST00000567284 CFAP65Q6ZU64 1925 aaKnown RBP13.92□□□□□ -0.18
FANCA-223ENST00000567284 MLECQ14165 292 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms