RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 ZFYVE16Q7Z3T8 1539 aa45.13■■■■■ 4.82
UBFD1-206ENST00000566669 MYO5CQ9NQX4 1742 aa45.12■■■■■ 4.81
UBFD1-206ENST00000566669 CCDC18Q5T9S5 1454 aa45.11■■■■■ 4.81
UBFD1-206ENST00000566669 CASKIN1Q8WXD9 1431 aa45.1■■■■■ 4.81
UBFD1-206ENST00000566669 MADDQ8WXG6 1647 aa45.02■■■■■ 4.8
UBFD1-206ENST00000566669 YEATS2Q9ULM3 1422 aa45.01■■■■■ 4.8
UBFD1-206ENST00000566669 ARHGAP5Q13017 1502 aa44.98■■■■■ 4.79
UBFD1-206ENST00000566669 ZNF518AQ6AHZ1 1483 aa44.97■■■■■ 4.79
UBFD1-206ENST00000566669 PCF11O94913 1555 aaKnown RBP44.95■■■■■ 4.79
UBFD1-206ENST00000566669 FYCO1Q9BQS8 1478 aa44.95■■■■■ 4.79
UBFD1-206ENST00000566669 LRRIQ1Q96JM4 1722 aa44.93■■■■■ 4.78
UBFD1-206ENST00000566669 ATP10AO60312 1499 aa44.91■■■■■ 4.78
UBFD1-206ENST00000566669 C9orf84Q5VXU9 1444 aa44.87■■■■■ 4.77
UBFD1-206ENST00000566669 RIMS1Q86UR5 1692 aaKnown RBP44.83■■■■■ 4.77
UBFD1-206ENST00000566669 KDM5CP41229 1560 aa44.82■■■■■ 4.77
UBFD1-206ENST00000566669 PREX2Q70Z35 1606 aa44.78■■■■■ 4.76
UBFD1-206ENST00000566669 ILDR1Q86SU0 546 aaPredicted RBP44.77■■■■■ 4.76
UBFD1-206ENST00000566669 AFAP1Q8N556 730 aa44.76■■■■■ 4.76
UBFD1-206ENST00000566669 CDC42BPBQ9Y5S2 1711 aa44.75■■■■■ 4.75
UBFD1-206ENST00000566669 SIGLEC1Q9BZZ2 1709 aa44.73■■■■■ 4.75
UBFD1-206ENST00000566669 LMTK3Q96Q04 1460 aa44.72■■■■■ 4.75
UBFD1-206ENST00000566669 MLECQ14165 292 aa44.71■■■■■ 4.75
UBFD1-206ENST00000566669 MLH3Q9UHC1 1453 aa44.71■■■■■ 4.75
UBFD1-206ENST00000566669 MYT1LQ9UL68 1186 aa44.7■■■■■ 4.75
UBFD1-206ENST00000566669 ARHGEF12Q9NZN5 1544 aa44.69■■■■■ 4.74
UBFD1-206ENST00000566669 ABCC1P33527 1531 aa44.68■■■■■ 4.74
UBFD1-206ENST00000566669 FER1L4A9Z1Z3 1794 aa44.66■■■■■ 4.74
UBFD1-206ENST00000566669 REREQ9P2R6 1566 aa44.65■■■■■ 4.74
UBFD1-206ENST00000566669 DIP2CQ9Y2E4 1556 aa44.58■■■■■ 4.73
UBFD1-206ENST00000566669 CDC42BPAQ5VT25 1732 aa44.58■■■■■ 4.73
UBFD1-206ENST00000566669 TRAPPC8Q9Y2L5 1435 aa44.57■■■■■ 4.72
UBFD1-206ENST00000566669 ITSN2Q9NZM3 1697 aa44.55■■■■■ 4.72
UBFD1-206ENST00000566669 GPATCH8Q9UKJ3 1502 aaKnown RBP44.52■■■■■ 4.72
UBFD1-206ENST00000566669 AGLP35573 1532 aa44.51■■■■■ 4.72
UBFD1-206ENST00000566669 PLPPR3Q6T4P5 718 aa44.51■■■■■ 4.72
UBFD1-206ENST00000566669 MTUS2Q5JR59 1369 aa44.5■■■■■ 4.71
UBFD1-206ENST00000566669 PLEKHH2Q8IVE3 1493 aa44.48■■■■■ 4.71
UBFD1-206ENST00000566669 ABCA6Q8N139 1617 aa44.48■■■■■ 4.71
UBFD1-206ENST00000566669 KIAA1107Q9UPP5 1409 aa44.46■■■■■ 4.71
UBFD1-206ENST00000566669 CCNB3Q8WWL7 1395 aa44.45■■■■■ 4.71
UBFD1-206ENST00000566669 ZNF777Q9ULD5 760 aaPredicted RBP44.45■■■■■ 4.71
UBFD1-206ENST00000566669 CFDP1Q9UEE9 299 aaPredicted RBP44.44■■■■■ 4.7
UBFD1-206ENST00000566669 ESF1Q9H501 851 aaKnown RBP44.41■■■■■ 4.7
UBFD1-206ENST00000566669 SAMD9LQ8IVG5 1584 aa44.4■■■■■ 4.7
UBFD1-206ENST00000566669 CEP162Q5TB80 1403 aa44.39■■■■■ 4.7
UBFD1-206ENST00000566669 HSPA2P54652 639 aa44.38■■■■■ 4.7
UBFD1-206ENST00000566669 KIDINS220Q9ULH0 1771 aa44.38■■■■■ 4.69
UBFD1-206ENST00000566669 SYCP2Q9BX26 1530 aa44.36■■■■■ 4.69
UBFD1-206ENST00000566669 SPAG9O60271 1321 aaKnown RBP44.36■■■■■ 4.69
UBFD1-206ENST00000566669 FBXO41Q8TF61 875 aa44.35■■■■■ 4.69
UBFD1-206ENST00000566669 PREX1Q8TCU6 1659 aa44.33■■■■■ 4.69
UBFD1-206ENST00000566669 EHBP1L1Q8N3D4 1523 aa44.33■■■■■ 4.69
UBFD1-206ENST00000566669 CNTLNQ9NXG0 1405 aa44.32■■■■■ 4.68
UBFD1-206ENST00000566669 CEBPAP49715 358 aaPredicted RBP44.3■■■■■ 4.68
UBFD1-206ENST00000566669 HNRNPMP52272 730 aaKnown RBP eCLIP44.3■■■■■ 4.68
UBFD1-206ENST00000566669 SETD1BQ9UPS6 1966 aaKnown RBP44.27■■■■■ 4.68
UBFD1-206ENST00000566669 UHRF1BP1Q6BDS2 1440 aa44.26■■■■■ 4.68
UBFD1-206ENST00000566669 ATP7AQ04656 1500 aa44.22■■■■■ 4.67
UBFD1-206ENST00000566669 DMRT2Q9Y5R5 561 aa44.17■■■■■ 4.66
UBFD1-206ENST00000566669 TIAM1Q13009 1591 aa44.17■■■■■ 4.66
UBFD1-206ENST00000566669 INO80Q9ULG1 1556 aaPredicted RBP44.16■■■■■ 4.66
UBFD1-206ENST00000566669 C3P01024 1663 aa44.13■■■■■ 4.66
UBFD1-206ENST00000566669 A2MP01023 1474 aa44.11■■■■■ 4.65
UBFD1-206ENST00000566669 PLXNC1O60486 1568 aa44.08■■■■■ 4.65
UBFD1-206ENST00000566669 PPP6R1Q9UPN7 881 aa44.06■■■■■ 4.64
UBFD1-206ENST00000566669 MROH2AA6NES4 1674 aa44.06■■■■■ 4.64
UBFD1-206ENST00000566669 RTEL1-TNFRSF6BF6WH68 1400 aa44.06■■■■■ 4.64
UBFD1-206ENST00000566669 NPATQ14207 1427 aa44.06■■■■■ 4.64
UBFD1-206ENST00000566669 MBD5Q9P267 1494 aa44.05■■■■■ 4.64
UBFD1-206ENST00000566669 RSPH4AQ5TD94 716 aa44.04■■■■■ 4.64
UBFD1-206ENST00000566669 SUPT6HQ7KZ85 1726 aaKnown RBP44.02■■■■■ 4.64
UBFD1-206ENST00000566669 ZNF644Q9H582 1327 aaPredicted RBP44.01■■■■■ 4.64
UBFD1-206ENST00000566669 NCOA2Q15596 1464 aa44■■■■■ 4.63
UBFD1-206ENST00000566669 ZMYM3Q14202 1370 aa43.99■■■■■ 4.63
UBFD1-206ENST00000566669 ADGBQ8N7X0 1667 aa43.99■■■■■ 4.63
UBFD1-206ENST00000566669 VPS8Q8N3P4 1428 aa43.99■■■■■ 4.63
UBFD1-206ENST00000566669 CERKQ8TCT0 537 aa43.94■■■■■ 4.62
UBFD1-206ENST00000566669 CCDC141Q6ZP82 1450 aa43.91■■■■■ 4.62
UBFD1-206ENST00000566669 GGT6Q6P531 493 aa43.89■■■■■ 4.62
UBFD1-206ENST00000566669 STRCQ7RTU9 1775 aa43.89■■■■■ 4.62
UBFD1-206ENST00000566669 PTPRTO14522 1441 aa43.89■■■■■ 4.62
UBFD1-206ENST00000566669 DHX29Q7Z478 1369 aaKnown RBP43.88■■■■■ 4.61
UBFD1-206ENST00000566669 CAMSAP2Q08AD1 1489 aa43.87■■■■■ 4.61
UBFD1-206ENST00000566669 MAP3K1Q13233 1512 aa43.85■■■■■ 4.61
UBFD1-206ENST00000566669 LOC105371045A0A1W2PR82 267 aa43.85■■■■■ 4.61
UBFD1-206ENST00000566669 LRRC9Q6ZRR7 1453 aa43.83■■■■■ 4.61
UBFD1-206ENST00000566669 CLTCQ00610 1675 aaKnown RBP43.81■■■■■ 4.6
UBFD1-206ENST00000566669 TSPY4P0CV99 314 aa43.78■■■■■ 4.6
UBFD1-206ENST00000566669 TSPY10P0CW01 314 aa43.78■■■■■ 4.6
UBFD1-206ENST00000566669 NCOA1Q15788 1441 aa43.78■■■■■ 4.6
UBFD1-206ENST00000566669 ARHGEF5Q12774 1597 aa43.77■■■■■ 4.6
UBFD1-206ENST00000566669 FAM135AQ9P2D6 1515 aa43.77■■■■■ 4.6
UBFD1-206ENST00000566669 PTPRKQ15262 1439 aa43.75■■■■■ 4.59
UBFD1-206ENST00000566669 KIF3BO15066 747 aa43.68■■■■■ 4.58
UBFD1-206ENST00000566669 CAMSAP1Q5T5Y3 1602 aa43.66■■■■■ 4.58
UBFD1-206ENST00000566669 MIA2Q96PC5 1412 aa43.65■■■■■ 4.58
UBFD1-206ENST00000566669 ZNF142P52746 1687 aaPredicted RBP43.65■■■■■ 4.58
UBFD1-206ENST00000566669 PLA2R1Q13018 1463 aa43.64■■■■■ 4.58
UBFD1-206ENST00000566669 MYO3AQ8NEV4 1616 aa43.63■■■■■ 4.58
UBFD1-206ENST00000566669 PKD2Q13563 968 aa43.61■■■■■ 4.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms