RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 RICTORQ6R327 1708 aa30.67■■■□□ 2.5
CCDC113-204ENST00000566498 ARID4BQ4LE39 1312 aaPredicted RBP30.64■■■□□ 2.5
CCDC113-204ENST00000566498 CDC42BPBQ9Y5S2 1711 aa30.63■■■□□ 2.49
CCDC113-204ENST00000566498 ZNF777Q9ULD5 760 aaPredicted RBP30.62■■■□□ 2.49
CCDC113-204ENST00000566498 MYT1LQ9UL68 1186 aa30.6■■■□□ 2.49
CCDC113-204ENST00000566498 POGZQ7Z3K3 1410 aa30.58■■■□□ 2.49
CCDC113-204ENST00000566498 VPS8Q8N3P4 1428 aa30.58■■■□□ 2.49
CCDC113-204ENST00000566498 AFAP1Q8N556 730 aa30.58■■■□□ 2.49
CCDC113-204ENST00000566498 PREX2Q70Z35 1606 aa30.57■■■□□ 2.48
CCDC113-204ENST00000566498 CDC42BPAQ5VT25 1732 aa30.56■■■□□ 2.48
CCDC113-204ENST00000566498 CCNB3Q8WWL7 1395 aa30.56■■■□□ 2.48
CCDC113-204ENST00000566498 CFDP1Q9UEE9 299 aaPredicted RBP30.55■■■□□ 2.48
CCDC113-204ENST00000566498 ZMYM4Q5VZL5 1548 aa30.53■■■□□ 2.48
CCDC113-204ENST00000566498 GPATCH8Q9UKJ3 1502 aaKnown RBP30.53■■■□□ 2.48
CCDC113-204ENST00000566498 MAGI2Q86UL8 1455 aa30.53■■■□□ 2.48
CCDC113-204ENST00000566498 YEATS2Q9ULM3 1422 aa30.51■■■□□ 2.47
CCDC113-204ENST00000566498 ZFYVE16Q7Z3T8 1539 aa30.51■■■□□ 2.47
CCDC113-204ENST00000566498 ZNF518AQ6AHZ1 1483 aa30.5■■■□□ 2.47
CCDC113-204ENST00000566498 EHBP1L1Q8N3D4 1523 aa30.49■■■□□ 2.47
CCDC113-204ENST00000566498 ARHGEF40Q8TER5 1519 aa30.49■■■□□ 2.47
CCDC113-204ENST00000566498 HNRNPMP52272 730 aaKnown RBP eCLIP30.46■■■□□ 2.47
CCDC113-204ENST00000566498 APLP2Q06481 763 aa30.44■■■□□ 2.46
CCDC113-204ENST00000566498 TIAM1Q13009 1591 aa30.44■■■□□ 2.46
CCDC113-204ENST00000566498 ABCC1P33527 1531 aa30.43■■■□□ 2.46
CCDC113-204ENST00000566498 ARHGEF12Q9NZN5 1544 aa30.43■■■□□ 2.46
CCDC113-204ENST00000566498 TRAPPC8Q9Y2L5 1435 aa30.43■■■□□ 2.46
CCDC113-204ENST00000566498 ATP10AO60312 1499 aa30.41■■■□□ 2.46
CCDC113-204ENST00000566498 MLECQ14165 292 aa30.4■■■□□ 2.46
CCDC113-204ENST00000566498 SAMD9LQ8IVG5 1584 aa30.39■■■□□ 2.46
CCDC113-204ENST00000566498 ITSN2Q9NZM3 1697 aa30.39■■■□□ 2.45
CCDC113-204ENST00000566498 KDM5CP41229 1560 aa30.37■■■□□ 2.45
CCDC113-204ENST00000566498 KANK4Q5T7N3 995 aaPredicted RBP30.37■■■□□ 2.45
CCDC113-204ENST00000566498 BCORL1Q5H9F3 1711 aa30.36■■■□□ 2.45
CCDC113-204ENST00000566498 SUPT6HQ7KZ85 1726 aaKnown RBP30.36■■■□□ 2.45
CCDC113-204ENST00000566498 ZNF644Q9H582 1327 aaPredicted RBP30.36■■■□□ 2.45
CCDC113-204ENST00000566498 NCOA2Q15596 1464 aa30.36■■■□□ 2.45
CCDC113-204ENST00000566498 LRRC9Q6ZRR7 1453 aa30.36■■■□□ 2.45
CCDC113-204ENST00000566498 PLEKHH2Q8IVE3 1493 aa30.35■■■□□ 2.45
CCDC113-204ENST00000566498 ADAMTSL3P82987 1691 aa30.34■■■□□ 2.45
CCDC113-204ENST00000566498 HECW2Q9P2P5 1572 aa30.34■■■□□ 2.45
CCDC113-204ENST00000566498 C9orf84Q5VXU9 1444 aa30.34■■■□□ 2.45
CCDC113-204ENST00000566498 SYCP2Q9BX26 1530 aa30.33■■■□□ 2.45
CCDC113-204ENST00000566498 MLH3Q9UHC1 1453 aa30.33■■■□□ 2.45
CCDC113-204ENST00000566498 KIAA1107Q9UPP5 1409 aa30.33■■■□□ 2.45
CCDC113-204ENST00000566498 SPAG9O60271 1321 aaKnown RBP30.32■■■□□ 2.44
CCDC113-204ENST00000566498 MAP3K1Q13233 1512 aa30.32■■■□□ 2.44
CCDC113-204ENST00000566498 SIGLEC1Q9BZZ2 1709 aa30.29■■■□□ 2.44
CCDC113-204ENST00000566498 PTPRMP28827 1452 aa30.27■■■□□ 2.44
CCDC113-204ENST00000566498 MADDQ8WXG6 1647 aa30.26■■■□□ 2.44
CCDC113-204ENST00000566498 PLPPR3Q6T4P5 718 aa30.26■■■□□ 2.43
CCDC113-204ENST00000566498 DIP2CQ9Y2E4 1556 aa30.24■■■□□ 2.43
CCDC113-204ENST00000566498 KIDINS220Q9ULH0 1771 aa30.23■■■□□ 2.43
CCDC113-204ENST00000566498 ABCA6Q8N139 1617 aa30.22■■■□□ 2.43
CCDC113-204ENST00000566498 RIMS1Q86UR5 1692 aaKnown RBP30.19■■■□□ 2.42
CCDC113-204ENST00000566498 RSPH4AQ5TD94 716 aa30.17■■■□□ 2.42
CCDC113-204ENST00000566498 MBD5Q9P267 1494 aa30.17■■■□□ 2.42
CCDC113-204ENST00000566498 CAMSAP2Q08AD1 1489 aa30.14■■■□□ 2.42
CCDC113-204ENST00000566498 ATP7AQ04656 1500 aa30.14■■■□□ 2.42
CCDC113-204ENST00000566498 ESF1Q9H501 851 aaKnown RBP30.14■■■□□ 2.42
CCDC113-204ENST00000566498 REREQ9P2R6 1566 aa30.14■■■□□ 2.42
CCDC113-204ENST00000566498 FER1L4A9Z1Z3 1794 aa30.11■■■□□ 2.41
CCDC113-204ENST00000566498 TSPY4P0CV99 314 aa30.11■■■□□ 2.41
CCDC113-204ENST00000566498 TSPY10P0CW01 314 aa30.11■■■□□ 2.41
CCDC113-204ENST00000566498 MYOM3Q5VTT5 1437 aa30.09■■■□□ 2.41
CCDC113-204ENST00000566498 AGLP35573 1532 aa30.08■■■□□ 2.41
CCDC113-204ENST00000566498 INO80Q9ULG1 1556 aaPredicted RBP30.07■■■□□ 2.4
CCDC113-204ENST00000566498 CCDC141Q6ZP82 1450 aa30.06■■■□□ 2.4
CCDC113-204ENST00000566498 RTEL1-TNFRSF6BF6WH68 1400 aa30.05■■■□□ 2.4
CCDC113-204ENST00000566498 MIA2Q96PC5 1412 aa30.05■■■□□ 2.4
CCDC113-204ENST00000566498 CEBPAP49715 358 aaPredicted RBP30.05■■■□□ 2.4
CCDC113-204ENST00000566498 A2MP01023 1474 aa30.05■■■□□ 2.4
CCDC113-204ENST00000566498 GGT6Q6P531 493 aa30■■■□□ 2.39
CCDC113-204ENST00000566498 ARHGEF5Q12774 1597 aa29.98■■■□□ 2.39
CCDC113-204ENST00000566498 ADGBQ8N7X0 1667 aa29.98■■■□□ 2.39
CCDC113-204ENST00000566498 DHX29Q7Z478 1369 aaKnown RBP29.95■■■□□ 2.39
CCDC113-204ENST00000566498 KIF3BO15066 747 aa29.92■■■□□ 2.38
CCDC113-204ENST00000566498 PLXNC1O60486 1568 aa29.92■■■□□ 2.38
CCDC113-204ENST00000566498 PTPN23Q9H3S7 1636 aa29.89■■■□□ 2.38
CCDC113-204ENST00000566498 CNTLNQ9NXG0 1405 aa29.89■■■□□ 2.38
CCDC113-204ENST00000566498 FGD6Q6ZV73 1430 aa29.88■■■□□ 2.37
CCDC113-204ENST00000566498 PPARGC1BQ86YN6 1023 aaKnown RBP29.87■■■□□ 2.37
CCDC113-204ENST00000566498 PPP6R1Q9UPN7 881 aa29.87■■■□□ 2.37
CCDC113-204ENST00000566498 HSPA2P54652 639 aa29.86■■■□□ 2.37
CCDC113-204ENST00000566498 LMTK3Q96Q04 1460 aa29.86■■■□□ 2.37
CCDC113-204ENST00000566498 FAM50AQ14320 339 aaKnown RBP29.85■■■□□ 2.37
CCDC113-204ENST00000566498 ZMYM3Q14202 1370 aa29.84■■■□□ 2.37
CCDC113-204ENST00000566498 C3P01024 1663 aa29.84■■■□□ 2.37
CCDC113-204ENST00000566498 MAST1Q9Y2H9 1570 aa29.81■■■□□ 2.36
CCDC113-204ENST00000566498 SETD1BQ9UPS6 1966 aaKnown RBP29.81■■■□□ 2.36
CCDC113-204ENST00000566498 ABCC5O15440 1437 aa29.8■■■□□ 2.36
CCDC113-204ENST00000566498 RRP7BPQ9NSQ0 103 aa29.79■■■□□ 2.36
CCDC113-204ENST00000566498 CLTCQ00610 1675 aaKnown RBP29.79■■■□□ 2.36
CCDC113-204ENST00000566498 CHIC2Q9UKJ5 165 aa29.78■■■□□ 2.36
CCDC113-204ENST00000566498 TCOF1Q13428 1488 aaKnown RBP29.78■■■□□ 2.36
CCDC113-204ENST00000566498 WASHC2CQ9Y4E1 1318 aa29.76■■■□□ 2.36
CCDC113-204ENST00000566498 DAPK1P53355 1430 aa29.76■■■□□ 2.35
CCDC113-204ENST00000566498 MROH2AA6NES4 1674 aa29.75■■■□□ 2.35
CCDC113-204ENST00000566498 PREX1Q8TCU6 1659 aa29.75■■■□□ 2.35
CCDC113-204ENST00000566498 UHRF1BP1Q6BDS2 1440 aa29.74■■■□□ 2.35
CCDC113-204ENST00000566498 DNMT1P26358 1616 aaKnown RBP29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms