RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 MYO5CQ9NQX4 1742 aa14.46□□□□□ -0.09
SMPD3-207ENST00000566466 PPARGC1BQ86YN6 1023 aaKnown RBP14.46□□□□□ -0.09
SMPD3-207ENST00000566466 MYOM3Q5VTT5 1437 aa14.45□□□□□ -0.1
SMPD3-207ENST00000566466 SAMD9LQ8IVG5 1584 aa14.44□□□□□ -0.1
SMPD3-207ENST00000566466 COL17A1Q9UMD9 1497 aaPredicted RBP14.44□□□□□ -0.1
SMPD3-207ENST00000566466 ARHGEF12Q9NZN5 1544 aa14.43□□□□□ -0.1
SMPD3-207ENST00000566466 FANCAO15360 1455 aa14.43□□□□□ -0.1
SMPD3-207ENST00000566466 APLP2Q06481 763 aa14.42□□□□□ -0.1
SMPD3-207ENST00000566466 CCNB3Q8WWL7 1395 aa14.42□□□□□ -0.1
SMPD3-207ENST00000566466 ITSN2Q9NZM3 1697 aa14.42□□□□□ -0.1
SMPD3-207ENST00000566466 NEO1Q92859 1461 aa14.41□□□□□ -0.1
SMPD3-207ENST00000566466 TSPOAP1O95153 1857 aa14.41□□□□□ -0.1
SMPD3-207ENST00000566466 ABCC1P33527 1531 aa14.41□□□□□ -0.1
SMPD3-207ENST00000566466 ARHGAP5Q13017 1502 aa14.41□□□□□ -0.1
SMPD3-207ENST00000566466 FGD6Q6ZV73 1430 aa14.41□□□□□ -0.1
SMPD3-207ENST00000566466 FRMPD1Q5SYB0 1578 aa14.4□□□□□ -0.1
SMPD3-207ENST00000566466 TCOF1Q13428 1488 aaKnown RBP14.4□□□□□ -0.1
SMPD3-207ENST00000566466 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
SMPD3-207ENST00000566466 MIA2Q96PC5 1412 aa14.4□□□□□ -0.1
SMPD3-207ENST00000566466 ZNF644Q9H582 1327 aaPredicted RBP14.39□□□□□ -0.11
SMPD3-207ENST00000566466 CAMSAP2Q08AD1 1489 aa14.38□□□□□ -0.11
SMPD3-207ENST00000566466 MBD5Q9P267 1494 aa14.38□□□□□ -0.11
SMPD3-207ENST00000566466 AKNAQ7Z591 1439 aa14.38□□□□□ -0.11
SMPD3-207ENST00000566466 TEX14Q8IWB6 1497 aa14.38□□□□□ -0.11
SMPD3-207ENST00000566466 RRBP1Q9P2E9 1410 aaKnown RBP14.37□□□□□ -0.11
SMPD3-207ENST00000566466 CFAP74Q9C0B2 1584 aa14.36□□□□□ -0.11
SMPD3-207ENST00000566466 PTPN23Q9H3S7 1636 aa14.36□□□□□ -0.11
SMPD3-207ENST00000566466 SYCP2Q9BX26 1530 aa14.36□□□□□ -0.11
SMPD3-207ENST00000566466 TRAPPC8Q9Y2L5 1435 aa14.34□□□□□ -0.11
SMPD3-207ENST00000566466 ADGRL1O94910 1474 aa14.34□□□□□ -0.11
SMPD3-207ENST00000566466 CFDP1Q9UEE9 299 aaPredicted RBP14.34□□□□□ -0.11
SMPD3-207ENST00000566466 POGZQ7Z3K3 1410 aa14.33□□□□□ -0.11
SMPD3-207ENST00000566466 KIAA1107Q9UPP5 1409 aa14.33□□□□□ -0.11
SMPD3-207ENST00000566466 RICTORQ6R327 1708 aa14.33□□□□□ -0.12
SMPD3-207ENST00000566466 KDM5CP41229 1560 aa14.33□□□□□ -0.12
SMPD3-207ENST00000566466 EFCAB2Q5VUJ9 269 aa14.32□□□□□ -0.12
SMPD3-207ENST00000566466 SCAPERQ9BY12 1400 aa14.32□□□□□ -0.12
SMPD3-207ENST00000566466 ARHGEF5Q12774 1597 aa14.31□□□□□ -0.12
SMPD3-207ENST00000566466 PTPRKQ15262 1439 aa14.3□□□□□ -0.12
SMPD3-207ENST00000566466 ZMYM4Q5VZL5 1548 aa14.3□□□□□ -0.12
SMPD3-207ENST00000566466 ABCC5O15440 1437 aa14.29□□□□□ -0.12
SMPD3-207ENST00000566466 DENND4BO75064 1496 aaPredicted RBP14.29□□□□□ -0.12
SMPD3-207ENST00000566466 PLEKHH2Q8IVE3 1493 aa14.29□□□□□ -0.12
SMPD3-207ENST00000566466 KDM6BO15054 1643 aa14.29□□□□□ -0.12
SMPD3-207ENST00000566466 DNMT1P26358 1616 aaKnown RBP14.29□□□□□ -0.12
SMPD3-207ENST00000566466 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.28□□□□□ -0.12
SMPD3-207ENST00000566466 INO80Q9ULG1 1556 aaPredicted RBP14.27□□□□□ -0.12
SMPD3-207ENST00000566466 HNRNPMP52272 730 aaKnown RBP eCLIP14.27□□□□□ -0.13
SMPD3-207ENST00000566466 ZNF777Q9ULD5 760 aaPredicted RBP14.27□□□□□ -0.13
SMPD3-207ENST00000566466 CROCC2H7BZ55 1655 aa14.26□□□□□ -0.13
SMPD3-207ENST00000566466 ZFYVE16Q7Z3T8 1539 aa14.26□□□□□ -0.13
SMPD3-207ENST00000566466 ZNF518AQ6AHZ1 1483 aa14.26□□□□□ -0.13
SMPD3-207ENST00000566466 CCDC141Q6ZP82 1450 aa14.26□□□□□ -0.13
SMPD3-207ENST00000566466 DAPK1P53355 1430 aa14.26□□□□□ -0.13
SMPD3-207ENST00000566466 RAPGEF3O95398 923 aa14.26□□□□□ -0.13
SMPD3-207ENST00000566466 MAST1Q9Y2H9 1570 aa14.25□□□□□ -0.13
SMPD3-207ENST00000566466 AFAP1Q8N556 730 aa14.24□□□□□ -0.13
SMPD3-207ENST00000566466 KIDINS220Q9ULH0 1771 aa14.24□□□□□ -0.13
SMPD3-207ENST00000566466 SHANK2Q9UPX8 1470 aa14.24□□□□□ -0.13
SMPD3-207ENST00000566466 YEATS2Q9ULM3 1422 aa14.24□□□□□ -0.13
SMPD3-207ENST00000566466 MLH3Q9UHC1 1453 aa14.23□□□□□ -0.13
SMPD3-207ENST00000566466 HECW2Q9P2P5 1572 aa14.22□□□□□ -0.13
SMPD3-207ENST00000566466 ABCA6Q8N139 1617 aa14.22□□□□□ -0.13
SMPD3-207ENST00000566466 SIGLEC1Q9BZZ2 1709 aa14.21□□□□□ -0.13
SMPD3-207ENST00000566466 DIP2CQ9Y2E4 1556 aa14.21□□□□□ -0.14
SMPD3-207ENST00000566466 ATP7AQ04656 1500 aa14.2□□□□□ -0.14
SMPD3-207ENST00000566466 ARHGEF40Q8TER5 1519 aa14.2□□□□□ -0.14
SMPD3-207ENST00000566466 ADGRL2O95490 1459 aa14.2□□□□□ -0.14
SMPD3-207ENST00000566466 C9orf84Q5VXU9 1444 aa14.2□□□□□ -0.14
SMPD3-207ENST00000566466 RTEL1-TNFRSF6BF6WH68 1400 aa14.19□□□□□ -0.14
SMPD3-207ENST00000566466 FAM50AQ14320 339 aaKnown RBP14.18□□□□□ -0.14
SMPD3-207ENST00000566466 MAGI2Q86UL8 1455 aa14.18□□□□□ -0.14
SMPD3-207ENST00000566466 PLXNC1O60486 1568 aa14.17□□□□□ -0.14
SMPD3-207ENST00000566466 ADGBQ8N7X0 1667 aa14.16□□□□□ -0.14
SMPD3-207ENST00000566466 NCOA1Q15788 1441 aa14.15□□□□□ -0.14
SMPD3-207ENST00000566466 SPAG9O60271 1321 aaKnown RBP14.15□□□□□ -0.15
SMPD3-207ENST00000566466 REREQ9P2R6 1566 aa14.14□□□□□ -0.15
SMPD3-207ENST00000566466 RSPH4AQ5TD94 716 aa14.14□□□□□ -0.15
SMPD3-207ENST00000566466 ROCK1Q13464 1354 aa14.12□□□□□ -0.15
SMPD3-207ENST00000566466 ATP10AO60312 1499 aa14.1□□□□□ -0.15
SMPD3-207ENST00000566466 KIF15Q9NS87 1388 aa14.09□□□□□ -0.15
SMPD3-207ENST00000566466 NAIPQ13075 1403 aa14.09□□□□□ -0.15
SMPD3-207ENST00000566466 CHIC2Q9UKJ5 165 aa14.09□□□□□ -0.15
SMPD3-207ENST00000566466 A2MP01023 1474 aa14.09□□□□□ -0.15
SMPD3-207ENST00000566466 HFM1A2PYH4 1435 aa14.08□□□□□ -0.15
SMPD3-207ENST00000566466 BCORL1Q5H9F3 1711 aa14.08□□□□□ -0.16
SMPD3-207ENST00000566466 AGLP35573 1532 aa14.08□□□□□ -0.16
SMPD3-207ENST00000566466 MROH1Q8NDA8 1641 aa14.08□□□□□ -0.16
SMPD3-207ENST00000566466 GCC2Q8IWJ2 1684 aa14.07□□□□□ -0.16
SMPD3-207ENST00000566466 DUOX2Q9NRD8 1548 aa14.07□□□□□ -0.16
SMPD3-207ENST00000566466 ITGAEP38570 1179 aa14.07□□□□□ -0.16
SMPD3-207ENST00000566466 DHX29Q7Z478 1369 aaKnown RBP14.07□□□□□ -0.16
SMPD3-207ENST00000566466 TSPY4P0CV99 314 aa14.06□□□□□ -0.16
SMPD3-207ENST00000566466 TSPY10P0CW01 314 aa14.06□□□□□ -0.16
SMPD3-207ENST00000566466 ANKRD30AQ9BXX3 1397 aa14.06□□□□□ -0.16
SMPD3-207ENST00000566466 PIAS4Q8N2W9 510 aaPredicted RBP14.05□□□□□ -0.16
SMPD3-207ENST00000566466 ERBINQ96RT1 1412 aa14.05□□□□□ -0.16
SMPD3-207ENST00000566466 RRP7BPQ9NSQ0 103 aa14.04□□□□□ -0.16
SMPD3-207ENST00000566466 RNF17Q9BXT8 1623 aaKnown RBP14.04□□□□□ -0.16
SMPD3-207ENST00000566466 EIF2AK4Q9P2K8 1649 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms