RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 PLCH2O75038 1416 aa12.87□□□□□ -0.35
CDH13-208ENST00000566333 FRMPD1Q5SYB0 1578 aa12.86□□□□□ -0.35
CDH13-208ENST00000566333 RICTORQ6R327 1708 aa12.86□□□□□ -0.35
CDH13-208ENST00000566333 ABCC1P33527 1531 aa12.86□□□□□ -0.35
CDH13-208ENST00000566333 ARHGAP5Q13017 1502 aa12.86□□□□□ -0.35
CDH13-208ENST00000566333 FANCAO15360 1455 aa12.85□□□□□ -0.35
CDH13-208ENST00000566333 NEO1Q92859 1461 aa12.85□□□□□ -0.35
CDH13-208ENST00000566333 KDM6BO15054 1643 aa12.84□□□□□ -0.35
CDH13-208ENST00000566333 PHLDB1Q86UU1 1377 aa12.81□□□□□ -0.36
CDH13-208ENST00000566333 MYOM3Q5VTT5 1437 aa12.81□□□□□ -0.36
CDH13-208ENST00000566333 COL17A1Q9UMD9 1497 aaPredicted RBP12.81□□□□□ -0.36
CDH13-208ENST00000566333 CCNB3Q8WWL7 1395 aa12.81□□□□□ -0.36
CDH13-208ENST00000566333 SYCP2Q9BX26 1530 aa12.8□□□□□ -0.36
CDH13-208ENST00000566333 APLP2Q06481 763 aa12.8□□□□□ -0.36
CDH13-208ENST00000566333 CAMSAP2Q08AD1 1489 aa12.79□□□□□ -0.36
CDH13-208ENST00000566333 PTPN23Q9H3S7 1636 aa12.79□□□□□ -0.36
CDH13-208ENST00000566333 CROCC2H7BZ55 1655 aa12.79□□□□□ -0.36
CDH13-208ENST00000566333 AKNAQ7Z591 1439 aa12.79□□□□□ -0.36
CDH13-208ENST00000566333 ADGRL1O94910 1474 aa12.78□□□□□ -0.36
CDH13-208ENST00000566333 ARHGEF12Q9NZN5 1544 aa12.78□□□□□ -0.36
CDH13-208ENST00000566333 KDM5CP41229 1560 aa12.78□□□□□ -0.36
CDH13-208ENST00000566333 ZMYM4Q5VZL5 1548 aa12.78□□□□□ -0.36
CDH13-208ENST00000566333 FGD6Q6ZV73 1430 aa12.77□□□□□ -0.37
CDH13-208ENST00000566333 POGZQ7Z3K3 1410 aa12.77□□□□□ -0.37
CDH13-208ENST00000566333 MIA2Q96PC5 1412 aa12.76□□□□□ -0.37
CDH13-208ENST00000566333 TCOF1Q13428 1488 aaKnown RBP12.76□□□□□ -0.37
CDH13-208ENST00000566333 ARHGEF5Q12774 1597 aa12.75□□□□□ -0.37
CDH13-208ENST00000566333 INO80Q9ULG1 1556 aaPredicted RBP12.75□□□□□ -0.37
CDH13-208ENST00000566333 PLEKHH2Q8IVE3 1493 aa12.74□□□□□ -0.37
CDH13-208ENST00000566333 DNMT1P26358 1616 aaKnown RBP12.73□□□□□ -0.37
CDH13-208ENST00000566333 HECW2Q9P2P5 1572 aa12.73□□□□□ -0.37
CDH13-208ENST00000566333 ARHGEF40Q8TER5 1519 aa12.73□□□□□ -0.37
CDH13-208ENST00000566333 DENND4BO75064 1496 aaPredicted RBP12.73□□□□□ -0.37
CDH13-208ENST00000566333 MBD5Q9P267 1494 aa12.73□□□□□ -0.37
CDH13-208ENST00000566333 KIAA1107Q9UPP5 1409 aa12.73□□□□□ -0.37
CDH13-208ENST00000566333 ZNF518AQ6AHZ1 1483 aa12.72□□□□□ -0.37
CDH13-208ENST00000566333 SCAPERQ9BY12 1400 aa12.72□□□□□ -0.37
CDH13-208ENST00000566333 TRAPPC8Q9Y2L5 1435 aa12.72□□□□□ -0.37
CDH13-208ENST00000566333 KIDINS220Q9ULH0 1771 aa12.72□□□□□ -0.37
CDH13-208ENST00000566333 EFCAB2Q5VUJ9 269 aa12.72□□□□□ -0.37
CDH13-208ENST00000566333 PPARGC1BQ86YN6 1023 aaKnown RBP12.72□□□□□ -0.37
CDH13-208ENST00000566333 CFDP1Q9UEE9 299 aaPredicted RBP12.72□□□□□ -0.37
CDH13-208ENST00000566333 ZFYVE16Q7Z3T8 1539 aa12.72□□□□□ -0.37
CDH13-208ENST00000566333 ZNF644Q9H582 1327 aaPredicted RBP12.71□□□□□ -0.37
CDH13-208ENST00000566333 ABCA6Q8N139 1617 aa12.71□□□□□ -0.37
CDH13-208ENST00000566333 SENP3Q9H4L4 574 aaPredicted RBP12.71□□□□□ -0.37
CDH13-208ENST00000566333 SIGLEC1Q9BZZ2 1709 aa12.71□□□□□ -0.38
CDH13-208ENST00000566333 ADGBQ8N7X0 1667 aa12.7□□□□□ -0.38
CDH13-208ENST00000566333 MAST1Q9Y2H9 1570 aa12.7□□□□□ -0.38
CDH13-208ENST00000566333 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
CDH13-208ENST00000566333 RRBP1Q9P2E9 1410 aaKnown RBP12.7□□□□□ -0.38
CDH13-208ENST00000566333 DIP2CQ9Y2E4 1556 aa12.69□□□□□ -0.38
CDH13-208ENST00000566333 ATP7AQ04656 1500 aa12.67□□□□□ -0.38
CDH13-208ENST00000566333 MLH3Q9UHC1 1453 aa12.66□□□□□ -0.38
CDH13-208ENST00000566333 SHANK2Q9UPX8 1470 aa12.66□□□□□ -0.38
CDH13-208ENST00000566333 PLXNC1O60486 1568 aa12.66□□□□□ -0.38
CDH13-208ENST00000566333 RAPGEF3O95398 923 aa12.66□□□□□ -0.38
CDH13-208ENST00000566333 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
CDH13-208ENST00000566333 YEATS2Q9ULM3 1422 aa12.65□□□□□ -0.38
CDH13-208ENST00000566333 MAGI2Q86UL8 1455 aa12.65□□□□□ -0.38
CDH13-208ENST00000566333 DAPK1P53355 1430 aa12.64□□□□□ -0.39
CDH13-208ENST00000566333 REREQ9P2R6 1566 aa12.64□□□□□ -0.39
CDH13-208ENST00000566333 ABCC5O15440 1437 aa12.63□□□□□ -0.39
CDH13-208ENST00000566333 HNRNPMP52272 730 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDH13-208ENST00000566333 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDH13-208ENST00000566333 AFAP1Q8N556 730 aa12.62□□□□□ -0.39
CDH13-208ENST00000566333 C9orf84Q5VXU9 1444 aa12.62□□□□□ -0.39
CDH13-208ENST00000566333 BCORL1Q5H9F3 1711 aa12.61□□□□□ -0.39
CDH13-208ENST00000566333 ADGRL2O95490 1459 aa12.6□□□□□ -0.39
CDH13-208ENST00000566333 RTEL1-TNFRSF6BF6WH68 1400 aa12.6□□□□□ -0.39
CDH13-208ENST00000566333 PTPRKQ15262 1439 aa12.6□□□□□ -0.39
CDH13-208ENST00000566333 GCC2Q8IWJ2 1684 aa12.58□□□□□ -0.4
CDH13-208ENST00000566333 EIF2AK4Q9P2K8 1649 aaKnown RBP12.57□□□□□ -0.4
CDH13-208ENST00000566333 SPAG9O60271 1321 aaKnown RBP12.57□□□□□ -0.4
CDH13-208ENST00000566333 FAM50AQ14320 339 aaKnown RBP12.56□□□□□ -0.4
CDH13-208ENST00000566333 ATP10AO60312 1499 aa12.56□□□□□ -0.4
CDH13-208ENST00000566333 AGLP35573 1532 aa12.56□□□□□ -0.4
CDH13-208ENST00000566333 RNF17Q9BXT8 1623 aaKnown RBP12.55□□□□□ -0.4
CDH13-208ENST00000566333 A2MP01023 1474 aa12.54□□□□□ -0.4
CDH13-208ENST00000566333 RSPH4AQ5TD94 716 aa12.54□□□□□ -0.4
CDH13-208ENST00000566333 DEPDC5O75140 1603 aa12.54□□□□□ -0.4
CDH13-208ENST00000566333 DUOX2Q9NRD8 1548 aa12.53□□□□□ -0.4
CDH13-208ENST00000566333 MROH1Q8NDA8 1641 aa12.53□□□□□ -0.4
CDH13-208ENST00000566333 ADAMTSL3P82987 1691 aa12.53□□□□□ -0.4
CDH13-208ENST00000566333 FER1L4A9Z1Z3 1794 aa12.52□□□□□ -0.41
CDH13-208ENST00000566333 NCOA1Q15788 1441 aa12.52□□□□□ -0.41
CDH13-208ENST00000566333 ROCK1Q13464 1354 aa12.51□□□□□ -0.41
CDH13-208ENST00000566333 KIF15Q9NS87 1388 aa12.51□□□□□ -0.41
CDH13-208ENST00000566333 MADDQ8WXG6 1647 aa12.5□□□□□ -0.41
CDH13-208ENST00000566333 PRDM15P57071 1507 aaPredicted RBP12.49□□□□□ -0.41
CDH13-208ENST00000566333 ERBINQ96RT1 1412 aa12.49□□□□□ -0.41
CDH13-208ENST00000566333 UNC13BO14795 1591 aa12.48□□□□□ -0.41
CDH13-208ENST00000566333 ANKRD30AQ9BXX3 1397 aa12.48□□□□□ -0.41
CDH13-208ENST00000566333 TSPY4P0CV99 314 aa12.48□□□□□ -0.41
CDH13-208ENST00000566333 TSPY10P0CW01 314 aa12.48□□□□□ -0.41
CDH13-208ENST00000566333 DHX29Q7Z478 1369 aaKnown RBP12.47□□□□□ -0.41
CDH13-208ENST00000566333 CEP152O94986 1710 aa12.47□□□□□ -0.41
CDH13-208ENST00000566333 ZC3H13Q5T200 1668 aaKnown RBP12.47□□□□□ -0.41
CDH13-208ENST00000566333 RIMS1Q86UR5 1692 aaKnown RBP12.47□□□□□ -0.41
CDH13-208ENST00000566333 HFM1A2PYH4 1435 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms