RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 ARHGAP5Q13017 1502 aa33.21■■■□□ 2.91
SHCBP1-205ENST00000566016 ITSN2Q9NZM3 1697 aa33.17■■■□□ 2.9
SHCBP1-205ENST00000566016 GPATCH8Q9UKJ3 1502 aaKnown RBP33.16■■■□□ 2.9
SHCBP1-205ENST00000566016 EFCAB2Q5VUJ9 269 aa33.16■■■□□ 2.9
SHCBP1-205ENST00000566016 RICTORQ6R327 1708 aa33.15■■■□□ 2.9
SHCBP1-205ENST00000566016 ADGRL1O94910 1474 aa33.14■■■□□ 2.9
SHCBP1-205ENST00000566016 FRMPD1Q5SYB0 1578 aa33.13■■■□□ 2.89
SHCBP1-205ENST00000566016 NCOA2Q15596 1464 aa33.13■■■□□ 2.89
SHCBP1-205ENST00000566016 APLP2Q06481 763 aa33.12■■■□□ 2.89
SHCBP1-205ENST00000566016 CCNB3Q8WWL7 1395 aa33.12■■■□□ 2.89
SHCBP1-205ENST00000566016 DENND4BO75064 1496 aaPredicted RBP33.11■■■□□ 2.89
SHCBP1-205ENST00000566016 ABCC1P33527 1531 aa33.07■■■□□ 2.88
SHCBP1-205ENST00000566016 KANK4Q5T7N3 995 aaPredicted RBP33.06■■■□□ 2.88
SHCBP1-205ENST00000566016 ZMYM4Q5VZL5 1548 aa33.04■■■□□ 2.88
SHCBP1-205ENST00000566016 POGZQ7Z3K3 1410 aa33.04■■■□□ 2.88
SHCBP1-205ENST00000566016 SCAPERQ9BY12 1400 aa33.04■■■□□ 2.88
SHCBP1-205ENST00000566016 SAMD9LQ8IVG5 1584 aa33.04■■■□□ 2.88
SHCBP1-205ENST00000566016 RAPGEF3O95398 923 aa33■■■□□ 2.87
SHCBP1-205ENST00000566016 CFDP1Q9UEE9 299 aaPredicted RBP32.99■■■□□ 2.87
SHCBP1-205ENST00000566016 ZNF518AQ6AHZ1 1483 aa32.98■■■□□ 2.87
SHCBP1-205ENST00000566016 PLEKHH2Q8IVE3 1493 aa32.98■■■□□ 2.87
SHCBP1-205ENST00000566016 KDM5CP41229 1560 aa32.97■■■□□ 2.87
SHCBP1-205ENST00000566016 KIAA1107Q9UPP5 1409 aa32.94■■■□□ 2.86
SHCBP1-205ENST00000566016 MAGI2Q86UL8 1455 aa32.94■■■□□ 2.86
SHCBP1-205ENST00000566016 ARHGEF12Q9NZN5 1544 aa32.93■■■□□ 2.86
SHCBP1-205ENST00000566016 ARHGEF40Q8TER5 1519 aa32.92■■■□□ 2.86
SHCBP1-205ENST00000566016 SYCP2Q9BX26 1530 aa32.92■■■□□ 2.86
SHCBP1-205ENST00000566016 MYOM3Q5VTT5 1437 aa32.9■■■□□ 2.86
SHCBP1-205ENST00000566016 ZNF777Q9ULD5 760 aaPredicted RBP32.86■■■□□ 2.85
SHCBP1-205ENST00000566016 MIA2Q96PC5 1412 aa32.86■■■□□ 2.85
SHCBP1-205ENST00000566016 HECW2Q9P2P5 1572 aa32.86■■■□□ 2.85
SHCBP1-205ENST00000566016 TRAPPC8Q9Y2L5 1435 aa32.85■■■□□ 2.85
SHCBP1-205ENST00000566016 ZFYVE16Q7Z3T8 1539 aa32.85■■■□□ 2.85
SHCBP1-205ENST00000566016 CAMSAP2Q08AD1 1489 aa32.84■■■□□ 2.85
SHCBP1-205ENST00000566016 MLH3Q9UHC1 1453 aa32.82■■■□□ 2.84
SHCBP1-205ENST00000566016 AFAP1Q8N556 730 aa32.8■■■□□ 2.84
SHCBP1-205ENST00000566016 MBD5Q9P267 1494 aa32.79■■■□□ 2.84
SHCBP1-205ENST00000566016 ZNF644Q9H582 1327 aaPredicted RBP32.78■■■□□ 2.84
SHCBP1-205ENST00000566016 YEATS2Q9ULM3 1422 aa32.76■■■□□ 2.84
SHCBP1-205ENST00000566016 ARHGEF5Q12774 1597 aa32.76■■■□□ 2.83
SHCBP1-205ENST00000566016 KIDINS220Q9ULH0 1771 aa32.75■■■□□ 2.83
SHCBP1-205ENST00000566016 HNRNPMP52272 730 aaKnown RBP eCLIP32.74■■■□□ 2.83
SHCBP1-205ENST00000566016 INO80Q9ULG1 1556 aaPredicted RBP32.73■■■□□ 2.83
SHCBP1-205ENST00000566016 FGD6Q6ZV73 1430 aa32.72■■■□□ 2.83
SHCBP1-205ENST00000566016 PTPN23Q9H3S7 1636 aa32.72■■■□□ 2.83
SHCBP1-205ENST00000566016 DIP2CQ9Y2E4 1556 aa32.71■■■□□ 2.83
SHCBP1-205ENST00000566016 CCDC141Q6ZP82 1450 aa32.71■■■□□ 2.83
SHCBP1-205ENST00000566016 ABCA6Q8N139 1617 aa32.7■■■□□ 2.83
SHCBP1-205ENST00000566016 REREQ9P2R6 1566 aa32.69■■■□□ 2.82
SHCBP1-205ENST00000566016 RSPH4AQ5TD94 716 aa32.68■■■□□ 2.82
SHCBP1-205ENST00000566016 ATP10AO60312 1499 aa32.68■■■□□ 2.82
SHCBP1-205ENST00000566016 ATP7AQ04656 1500 aa32.68■■■□□ 2.82
SHCBP1-205ENST00000566016 TCOF1Q13428 1488 aaKnown RBP32.68■■■□□ 2.82
SHCBP1-205ENST00000566016 C9orf84Q5VXU9 1444 aa32.65■■■□□ 2.82
SHCBP1-205ENST00000566016 SPAG9O60271 1321 aaKnown RBP32.65■■■□□ 2.82
SHCBP1-205ENST00000566016 SIGLEC1Q9BZZ2 1709 aa32.64■■■□□ 2.81
SHCBP1-205ENST00000566016 RTEL1-TNFRSF6BF6WH68 1400 aa32.62■■■□□ 2.81
SHCBP1-205ENST00000566016 MAST1Q9Y2H9 1570 aa32.59■■■□□ 2.81
SHCBP1-205ENST00000566016 BCORL1Q5H9F3 1711 aa32.58■■■□□ 2.81
SHCBP1-205ENST00000566016 CROCC2H7BZ55 1655 aa32.58■■■□□ 2.81
SHCBP1-205ENST00000566016 MYT1LQ9UL68 1186 aa32.57■■■□□ 2.8
SHCBP1-205ENST00000566016 ADGBQ8N7X0 1667 aa32.57■■■□□ 2.8
SHCBP1-205ENST00000566016 DNMT1P26358 1616 aaKnown RBP32.56■■■□□ 2.8
SHCBP1-205ENST00000566016 AGLP35573 1532 aa32.54■■■□□ 2.8
SHCBP1-205ENST00000566016 SHANK2Q9UPX8 1470 aa32.53■■■□□ 2.8
SHCBP1-205ENST00000566016 PLXNC1O60486 1568 aa32.52■■■□□ 2.8
SHCBP1-205ENST00000566016 ADAMTSL3P82987 1691 aa32.52■■■□□ 2.8
SHCBP1-205ENST00000566016 KDM4FA0A1W2PPD8 638 aa32.51■■■□□ 2.79
SHCBP1-205ENST00000566016 TSPY4P0CV99 314 aa32.48■■■□□ 2.79
SHCBP1-205ENST00000566016 TSPY10P0CW01 314 aa32.48■■■□□ 2.79
SHCBP1-205ENST00000566016 ARID4BQ4LE39 1312 aaPredicted RBP32.48■■■□□ 2.79
SHCBP1-205ENST00000566016 ABCC5O15440 1437 aa32.47■■■□□ 2.79
SHCBP1-205ENST00000566016 DAPK1P53355 1430 aa32.47■■■□□ 2.79
SHCBP1-205ENST00000566016 PPARGC1BQ86YN6 1023 aaKnown RBP32.47■■■□□ 2.79
SHCBP1-205ENST00000566016 A2MP01023 1474 aa32.47■■■□□ 2.79
SHCBP1-205ENST00000566016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.42■■■□□ 2.78
SHCBP1-205ENST00000566016 MADDQ8WXG6 1647 aa32.4■■■□□ 2.78
SHCBP1-205ENST00000566016 RRBP1Q9P2E9 1410 aaKnown RBP32.38■■■□□ 2.77
SHCBP1-205ENST00000566016 FER1L4A9Z1Z3 1794 aa32.38■■■□□ 2.77
SHCBP1-205ENST00000566016 FAM50AQ14320 339 aaKnown RBP32.36■■■□□ 2.77
SHCBP1-205ENST00000566016 DHX29Q7Z478 1369 aaKnown RBP32.36■■■□□ 2.77
SHCBP1-205ENST00000566016 ADGRL2O95490 1459 aa32.32■■■□□ 2.76
SHCBP1-205ENST00000566016 RIMS1Q86UR5 1692 aaKnown RBP32.31■■■□□ 2.76
SHCBP1-205ENST00000566016 EIF2AK4Q9P2K8 1649 aaKnown RBP32.3■■■□□ 2.76
SHCBP1-205ENST00000566016 DUOX2Q9NRD8 1548 aa32.3■■■□□ 2.76
SHCBP1-205ENST00000566016 PTPRMP28827 1452 aa32.26■■■□□ 2.76
SHCBP1-205ENST00000566016 ANKRD30AQ9BXX3 1397 aa32.26■■■□□ 2.76
SHCBP1-205ENST00000566016 KIF15Q9NS87 1388 aa32.26■■■□□ 2.76
SHCBP1-205ENST00000566016 MLECQ14165 292 aa32.25■■■□□ 2.75
SHCBP1-205ENST00000566016 NCOA1Q15788 1441 aa32.24■■■□□ 2.75
SHCBP1-205ENST00000566016 AEBP2Q6ZN18 517 aaPredicted RBP32.24■■■□□ 2.75
SHCBP1-205ENST00000566016 RNF17Q9BXT8 1623 aaKnown RBP32.22■■■□□ 2.75
SHCBP1-205ENST00000566016 ERBINQ96RT1 1412 aa32.21■■■□□ 2.75
SHCBP1-205ENST00000566016 FAM135AQ9P2D6 1515 aa32.21■■■□□ 2.75
SHCBP1-205ENST00000566016 PTPRKQ15262 1439 aa32.21■■■□□ 2.75
SHCBP1-205ENST00000566016 CNTLNQ9NXG0 1405 aa32.19■■■□□ 2.74
SHCBP1-205ENST00000566016 MROH2AA6NES4 1674 aa32.19■■■□□ 2.74
SHCBP1-205ENST00000566016 ROCK1Q13464 1354 aa32.17■■■□□ 2.74
SHCBP1-205ENST00000566016 CHIC2Q9UKJ5 165 aa32.16■■■□□ 2.74
SHCBP1-205ENST00000566016 PPP6R1Q9UPN7 881 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms