RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 NOP58Q9Y2X3 529 aaKnown RBP17.39■□□□□ 0.37
CX3CL1-204ENST00000565912 SMARCA2P51531 1590 aa17.39■□□□□ 0.37
CX3CL1-204ENST00000565912 HDGFP51858 240 aaKnown RBP17.39■□□□□ 0.37
CX3CL1-204ENST00000565912 MORC1Q86VD1 984 aa17.38■□□□□ 0.37
CX3CL1-204ENST00000565912 SPRYD3Q8NCJ5 442 aa17.38■□□□□ 0.37
CX3CL1-204ENST00000565912 MCCP23508 829 aa17.37■□□□□ 0.37
CX3CL1-204ENST00000565912 RTF1Q92541 710 aaKnown RBP17.37■□□□□ 0.37
CX3CL1-204ENST00000565912 KANK1Q14678 1352 aa17.36■□□□□ 0.37
CX3CL1-204ENST00000565912 CCNB3Q8WWL7 1395 aa17.36■□□□□ 0.37
CX3CL1-204ENST00000565912 APBB1O00213 710 aa17.35■□□□□ 0.37
CX3CL1-204ENST00000565912 ABCC8Q09428 1581 aa17.35■□□□□ 0.37
CX3CL1-204ENST00000565912 DRC7Q8IY82 874 aa17.34■□□□□ 0.37
CX3CL1-204ENST00000565912 GNL2Q13823 731 aaKnown RBP17.33■□□□□ 0.37
CX3CL1-204ENST00000565912 STK26Q9P289 416 aa17.33■□□□□ 0.36
CX3CL1-204ENST00000565912 CHAF1AQ13111 956 aaPredicted RBP17.32■□□□□ 0.36
CX3CL1-204ENST00000565912 ZNF330Q9Y3S2 320 aaPredicted RBP17.32■□□□□ 0.36
CX3CL1-204ENST00000565912 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
CX3CL1-204ENST00000565912 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
CX3CL1-204ENST00000565912 PAK3O75914 559 aaPredicted RBP17.3■□□□□ 0.36
CX3CL1-204ENST00000565912 GGT6Q6P531 493 aa17.29■□□□□ 0.36
CX3CL1-204ENST00000565912 CSB-PGBD3P0DP91 1061 aa17.28■□□□□ 0.36
CX3CL1-204ENST00000565912 WIZO95785 1651 aa17.27■□□□□ 0.36
CX3CL1-204ENST00000565912 KIAA1211Q6ZU35 1233 aa17.27■□□□□ 0.36
CX3CL1-204ENST00000565912 MSNP26038 577 aaKnown RBP17.27■□□□□ 0.35
CX3CL1-204ENST00000565912 HDGFL2Q7Z4V5 671 aaPredicted RBP17.26■□□□□ 0.35
CX3CL1-204ENST00000565912 TDRD9Q8NDG6 1382 aaKnown RBP17.24■□□□□ 0.35
CX3CL1-204ENST00000565912 IPO8O15397 1037 aaKnown RBP17.23■□□□□ 0.35
CX3CL1-204ENST00000565912 CFAP44Q96MT7 982 aa17.23■□□□□ 0.35
CX3CL1-204ENST00000565912 TOP2AP11388 1531 aaKnown RBP17.22■□□□□ 0.35
CX3CL1-204ENST00000565912 L1TD1Q5T7N2 865 aaKnown RBP17.21■□□□□ 0.35
CX3CL1-204ENST00000565912 U2AF1L5P0DN76 240 aaPredicted RBP17.21■□□□□ 0.35
CX3CL1-204ENST00000565912 U2AF1Q01081 240 aaKnown RBP eCLIP17.21■□□□□ 0.35
CX3CL1-204ENST00000565912 ITPRIPQ8IWB1 547 aa17.19■□□□□ 0.34
CX3CL1-204ENST00000565912 HSPA5P11021 654 aaKnown RBP17.19■□□□□ 0.34
CX3CL1-204ENST00000565912 KIAA2012Q0VF49 1180 aa17.19■□□□□ 0.34
CX3CL1-204ENST00000565912 TMX4Q9H1E5 349 aaPredicted RBP17.18■□□□□ 0.34
CX3CL1-204ENST00000565912 CCDC9Q9Y3X0 531 aaKnown RBP17.18■□□□□ 0.34
CX3CL1-204ENST00000565912 PKD2Q13563 968 aa17.17■□□□□ 0.34
CX3CL1-204ENST00000565912 KTN1Q86UP2 1357 aaKnown RBP17.17■□□□□ 0.34
CX3CL1-204ENST00000565912 GORABQ5T7V8 394 aa17.17■□□□□ 0.34
CX3CL1-204ENST00000565912 CHMP3Q9Y3E7 222 aa17.16■□□□□ 0.34
CX3CL1-204ENST00000565912 CALD1Q05682 793 aaKnown RBP17.16■□□□□ 0.34
CX3CL1-204ENST00000565912 FOXD1Q16676 465 aa17.15■□□□□ 0.34
CX3CL1-204ENST00000565912 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
CX3CL1-204ENST00000565912 CARMIL2Q6F5E8 1435 aa17.14■□□□□ 0.33
CX3CL1-204ENST00000565912 RWDD1Q9H446 243 aaPredicted RBP17.14■□□□□ 0.33
CX3CL1-204ENST00000565912 TAF7LQ5H9L4 462 aa17.13■□□□□ 0.33
CX3CL1-204ENST00000565912 AMER1Q5JTC6 1135 aaPredicted RBP17.13■□□□□ 0.33
CX3CL1-204ENST00000565912 NOC3LQ8WTT2 800 aaKnown RBP17.12■□□□□ 0.33
CX3CL1-204ENST00000565912 GBP4Q96PP9 640 aa17.12■□□□□ 0.33
CX3CL1-204ENST00000565912 VPS8Q8N3P4 1428 aa17.12■□□□□ 0.33
CX3CL1-204ENST00000565912 STK31Q9BXU1 1019 aa17.12■□□□□ 0.33
CX3CL1-204ENST00000565912 KANK4Q5T7N3 995 aaPredicted RBP17.12■□□□□ 0.33
CX3CL1-204ENST00000565912 GZF1Q9H116 711 aaPredicted RBP17.12■□□□□ 0.33
CX3CL1-204ENST00000565912 ATAD2BQ9ULI0 1458 aa17.11■□□□□ 0.33
CX3CL1-204ENST00000565912 HTATSF1O43719 755 aaKnown RBP17.11■□□□□ 0.33
CX3CL1-204ENST00000565912 HSP90B1P14625 803 aaKnown RBP17.1■□□□□ 0.33
CX3CL1-204ENST00000565912 ARHGAP35Q9NRY4 1499 aa17.1■□□□□ 0.33
CX3CL1-204ENST00000565912 SLKQ9H2G2 1235 aaPredicted RBP17.1■□□□□ 0.33
CX3CL1-204ENST00000565912 CCER2I3L3R5 266 aa17.1■□□□□ 0.33
CX3CL1-204ENST00000565912 RCAN3Q9UKA8 241 aa17.09■□□□□ 0.33
CX3CL1-204ENST00000565912 SPAG9O60271 1321 aaKnown RBP17.09■□□□□ 0.33
CX3CL1-204ENST00000565912 TRIM6-TRIM34B2RNG4 842 aa17.09■□□□□ 0.33
CX3CL1-204ENST00000565912 ROCK2O75116 1388 aaKnown RBP17.08■□□□□ 0.33
CX3CL1-204ENST00000565912 DEKP35659 375 aaKnown RBP17.08■□□□□ 0.32
CX3CL1-204ENST00000565912 PRM3Q9NNZ6 103 aa17.08■□□□□ 0.32
CX3CL1-204ENST00000565912 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.32
CX3CL1-204ENST00000565912 G3V3G9 751 aa17.08■□□□□ 0.32
CX3CL1-204ENST00000565912 PDE4CQ08493 712 aa17.08■□□□□ 0.32
CX3CL1-204ENST00000565912 DCAF8Q5TAQ9 597 aa17.08■□□□□ 0.32
CX3CL1-204ENST00000565912 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
CX3CL1-204ENST00000565912 GPATCH3Q96I76 525 aa17.07■□□□□ 0.32
CX3CL1-204ENST00000565912 MFAP1P55081 439 aaKnown RBP17.06■□□□□ 0.32
CX3CL1-204ENST00000565912 SLC4A10Q6U841 1118 aa17.06■□□□□ 0.32
CX3CL1-204ENST00000565912 SMC4Q9NTJ3 1288 aa17.06■□□□□ 0.32
CX3CL1-204ENST00000565912 CHMP4AQ9BY43 222 aa17.06■□□□□ 0.32
CX3CL1-204ENST00000565912 PTMSP20962 102 aa17.05■□□□□ 0.32
CX3CL1-204ENST00000565912 RASSF8Q8NHQ8 419 aa17.05■□□□□ 0.32
CX3CL1-204ENST00000565912 TPM4P67936 248 aa17.05■□□□□ 0.32
CX3CL1-204ENST00000565912 ARID3AQ99856 593 aa17.04■□□□□ 0.32
CX3CL1-204ENST00000565912 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
CX3CL1-204ENST00000565912 SYAP1Q96A49 352 aaPredicted RBP17.04■□□□□ 0.32
CX3CL1-204ENST00000565912 FMN1Q68DA7 1419 aa17.04■□□□□ 0.32
CX3CL1-204ENST00000565912 NOL8Q76FK4 1167 aaKnown RBP17.03■□□□□ 0.32
CX3CL1-204ENST00000565912 RALBP1Q15311 655 aa17.03■□□□□ 0.32
CX3CL1-204ENST00000565912 CREBRFQ8IUR6 639 aa17.03■□□□□ 0.32
CX3CL1-204ENST00000565912 RBM19Q9Y4C8 960 aaKnown RBP17.03■□□□□ 0.32
CX3CL1-204ENST00000565912 NUTM2DQ5VT03 806 aaPredicted RBP17.03■□□□□ 0.32
CX3CL1-204ENST00000565912 PMFBP1Q8TBY8 1022 aa17.02■□□□□ 0.32
CX3CL1-204ENST00000565912 HMMRO75330 724 aa17.02■□□□□ 0.32
CX3CL1-204ENST00000565912 NGDNQ8NEJ9 315 aaKnown RBP17.02■□□□□ 0.32
CX3CL1-204ENST00000565912 TOMM22Q9NS69 142 aa17.02■□□□□ 0.32
CX3CL1-204ENST00000565912 CCDC34Q96HJ3 373 aa17.02■□□□□ 0.31
CX3CL1-204ENST00000565912 LTV1Q96GA3 475 aaPredicted RBP17.02■□□□□ 0.31
CX3CL1-204ENST00000565912 NUP155O75694 1391 aa17.01■□□□□ 0.31
CX3CL1-204ENST00000565912 CLUAP1Q96AJ1 413 aa17.01■□□□□ 0.31
CX3CL1-204ENST00000565912 HDAC5Q9UQL6 1122 aa17.01■□□□□ 0.31
CX3CL1-204ENST00000565912 FRAT2O75474 233 aaPredicted RBP17■□□□□ 0.31
CX3CL1-204ENST00000565912 TERF2IPQ9NYB0 399 aa17■□□□□ 0.31
CX3CL1-204ENST00000565912 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms