RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 PREX2Q70Z35 1606 aa14.04□□□□□ -0.16
CNEP1R1-206ENST00000565556 TTC37Q6PGP7 1564 aa14.04□□□□□ -0.16
CNEP1R1-206ENST00000565556 MAPKBP1O60336 1514 aa14.02□□□□□ -0.16
CNEP1R1-206ENST00000565556 ITGAEP38570 1179 aa14.02□□□□□ -0.16
CNEP1R1-206ENST00000565556 CDC42BPBQ9Y5S2 1711 aa14.02□□□□□ -0.17
CNEP1R1-206ENST00000565556 ABCA9Q8IUA7 1624 aa14.01□□□□□ -0.17
CNEP1R1-206ENST00000565556 CAMSAP2Q08AD1 1489 aa14□□□□□ -0.17
CNEP1R1-206ENST00000565556 PLCH2O75038 1416 aa14□□□□□ -0.17
CNEP1R1-206ENST00000565556 ARAP3Q8WWN8 1544 aa14□□□□□ -0.17
CNEP1R1-206ENST00000565556 ARHGAP5Q13017 1502 aa13.98□□□□□ -0.17
CNEP1R1-206ENST00000565556 ZNF777Q9ULD5 760 aaPredicted RBP13.98□□□□□ -0.17
CNEP1R1-206ENST00000565556 DNMT1P26358 1616 aaKnown RBP13.98□□□□□ -0.17
CNEP1R1-206ENST00000565556 ZNF644Q9H582 1327 aaPredicted RBP13.98□□□□□ -0.17
CNEP1R1-206ENST00000565556 SCAF1Q9H7N4 1312 aaKnown RBP13.98□□□□□ -0.17
CNEP1R1-206ENST00000565556 PLEKHH2Q8IVE3 1493 aa13.97□□□□□ -0.17
CNEP1R1-206ENST00000565556 EFCAB2Q5VUJ9 269 aa13.96□□□□□ -0.17
CNEP1R1-206ENST00000565556 DAPK1P53355 1430 aa13.95□□□□□ -0.18
CNEP1R1-206ENST00000565556 RSPH4AQ5TD94 716 aa13.95□□□□□ -0.18
CNEP1R1-206ENST00000565556 SAMD9LQ8IVG5 1584 aa13.95□□□□□ -0.18
CNEP1R1-206ENST00000565556 ARHGEF5Q12774 1597 aa13.94□□□□□ -0.18
CNEP1R1-206ENST00000565556 ABCC5O15440 1437 aa13.94□□□□□ -0.18
CNEP1R1-206ENST00000565556 PTPRKQ15262 1439 aa13.94□□□□□ -0.18
CNEP1R1-206ENST00000565556 SETD5Q9C0A6 1442 aa13.93□□□□□ -0.18
CNEP1R1-206ENST00000565556 KIAA1107Q9UPP5 1409 aa13.93□□□□□ -0.18
CNEP1R1-206ENST00000565556 AKNAQ7Z591 1439 aa13.93□□□□□ -0.18
CNEP1R1-206ENST00000565556 CCER1Q8TC90 406 aaPredicted RBP13.93□□□□□ -0.18
CNEP1R1-206ENST00000565556 CROCC2H7BZ55 1655 aa13.92□□□□□ -0.18
CNEP1R1-206ENST00000565556 ROCK1Q13464 1354 aa13.92□□□□□ -0.18
CNEP1R1-206ENST00000565556 GLI2P10070 1586 aa13.92□□□□□ -0.18
CNEP1R1-206ENST00000565556 HFM1A2PYH4 1435 aa13.91□□□□□ -0.18
CNEP1R1-206ENST00000565556 CD109Q6YHK3 1445 aa13.91□□□□□ -0.18
CNEP1R1-206ENST00000565556 MBD5Q9P267 1494 aa13.9□□□□□ -0.18
CNEP1R1-206ENST00000565556 SHANK2Q9UPX8 1470 aa13.9□□□□□ -0.18
CNEP1R1-206ENST00000565556 CFAP74Q9C0B2 1584 aa13.9□□□□□ -0.18
CNEP1R1-206ENST00000565556 ADGBQ8N7X0 1667 aa13.9□□□□□ -0.18
CNEP1R1-206ENST00000565556 FANCAO15360 1455 aa13.9□□□□□ -0.18
CNEP1R1-206ENST00000565556 TSPY4P0CV99 314 aa13.9□□□□□ -0.18
CNEP1R1-206ENST00000565556 TSPY10P0CW01 314 aa13.9□□□□□ -0.18
CNEP1R1-206ENST00000565556 HNRNPMP52272 730 aaKnown RBP eCLIP13.9□□□□□ -0.18
CNEP1R1-206ENST00000565556 CCDC141Q6ZP82 1450 aa13.89□□□□□ -0.19
CNEP1R1-206ENST00000565556 CHIC2Q9UKJ5 165 aa13.89□□□□□ -0.19
CNEP1R1-206ENST00000565556 RAB3GAP2Q9H2M9 1393 aa13.89□□□□□ -0.19
CNEP1R1-206ENST00000565556 ABCC1P33527 1531 aa13.89□□□□□ -0.19
CNEP1R1-206ENST00000565556 SYCP2Q9BX26 1530 aa13.89□□□□□ -0.19
CNEP1R1-206ENST00000565556 GCC2Q8IWJ2 1684 aa13.88□□□□□ -0.19
CNEP1R1-206ENST00000565556 NAIPQ13075 1403 aa13.87□□□□□ -0.19
CNEP1R1-206ENST00000565556 DNAJC5Q9H3Z4 198 aa13.87□□□□□ -0.19
CNEP1R1-206ENST00000565556 MAP3K4Q9Y6R4 1608 aa13.87□□□□□ -0.19
CNEP1R1-206ENST00000565556 ADGRL2O95490 1459 aa13.87□□□□□ -0.19
CNEP1R1-206ENST00000565556 DIP2BQ9P265 1576 aa13.87□□□□□ -0.19
CNEP1R1-206ENST00000565556 ACIN1Q9UKV3 1341 aaKnown RBP13.87□□□□□ -0.19
CNEP1R1-206ENST00000565556 ANKRD30AQ9BXX3 1397 aa13.87□□□□□ -0.19
CNEP1R1-206ENST00000565556 PLPPR3Q6T4P5 718 aa13.86□□□□□ -0.19
CNEP1R1-206ENST00000565556 C9orf84Q5VXU9 1444 aa13.85□□□□□ -0.19
CNEP1R1-206ENST00000565556 MAST1Q9Y2H9 1570 aa13.85□□□□□ -0.19
CNEP1R1-206ENST00000565556 RRP7BPQ9NSQ0 103 aa13.85□□□□□ -0.19
CNEP1R1-206ENST00000565556 NCOA1Q15788 1441 aa13.84□□□□□ -0.19
CNEP1R1-206ENST00000565556 NEO1Q92859 1461 aa13.84□□□□□ -0.19
CNEP1R1-206ENST00000565556 FAM69CQ0P6D2 419 aa13.84□□□□□ -0.19
CNEP1R1-206ENST00000565556 ARHGEF12Q9NZN5 1544 aa13.84□□□□□ -0.19
CNEP1R1-206ENST00000565556 ADGRL1O94910 1474 aa13.83□□□□□ -0.2
CNEP1R1-206ENST00000565556 SCAPERQ9BY12 1400 aa13.82□□□□□ -0.2
CNEP1R1-206ENST00000565556 TRAPPC8Q9Y2L5 1435 aa13.8□□□□□ -0.2
CNEP1R1-206ENST00000565556 KIF13AQ9H1H9 1805 aa13.8□□□□□ -0.2
CNEP1R1-206ENST00000565556 PLXNC1O60486 1568 aa13.79□□□□□ -0.2
CNEP1R1-206ENST00000565556 RTEL1-TNFRSF6BF6WH68 1400 aa13.79□□□□□ -0.2
CNEP1R1-206ENST00000565556 CLSPNQ9HAW4 1339 aa13.78□□□□□ -0.2
CNEP1R1-206ENST00000565556 DHX57Q6P158 1386 aaKnown RBP13.78□□□□□ -0.2
CNEP1R1-206ENST00000565556 TEX14Q8IWB6 1497 aa13.78□□□□□ -0.2
CNEP1R1-206ENST00000565556 CENPBP07199 599 aaPredicted RBP13.78□□□□□ -0.2
CNEP1R1-206ENST00000565556 SPAG9O60271 1321 aaKnown RBP13.78□□□□□ -0.2
CNEP1R1-206ENST00000565556 KIF15Q9NS87 1388 aa13.78□□□□□ -0.2
CNEP1R1-206ENST00000565556 ZNF518AQ6AHZ1 1483 aa13.77□□□□□ -0.2
CNEP1R1-206ENST00000565556 DIEXFQ68CQ4 756 aaKnown RBP13.77□□□□□ -0.21
CNEP1R1-206ENST00000565556 AFAP1Q8N556 730 aa13.76□□□□□ -0.21
CNEP1R1-206ENST00000565556 TSPOAP1O95153 1857 aa13.76□□□□□ -0.21
CNEP1R1-206ENST00000565556 KDM6BO15054 1643 aa13.76□□□□□ -0.21
CNEP1R1-206ENST00000565556 ANKRD50Q9ULJ7 1429 aa13.76□□□□□ -0.21
CNEP1R1-206ENST00000565556 POGZQ7Z3K3 1410 aa13.75□□□□□ -0.21
CNEP1R1-206ENST00000565556 PPRC1Q5VV67 1664 aaKnown RBP13.74□□□□□ -0.21
CNEP1R1-206ENST00000565556 DENND4BO75064 1496 aaPredicted RBP13.74□□□□□ -0.21
CNEP1R1-206ENST00000565556 INO80Q9ULG1 1556 aaPredicted RBP13.74□□□□□ -0.21
CNEP1R1-206ENST00000565556 ATP7AQ04656 1500 aa13.74□□□□□ -0.21
CNEP1R1-206ENST00000565556 ZFYVE16Q7Z3T8 1539 aa13.74□□□□□ -0.21
CNEP1R1-206ENST00000565556 DUOX2Q9NRD8 1548 aa13.74□□□□□ -0.21
CNEP1R1-206ENST00000565556 KDM5CP41229 1560 aa13.73□□□□□ -0.21
CNEP1R1-206ENST00000565556 NEUROD1Q13562 356 aa13.73□□□□□ -0.21
CNEP1R1-206ENST00000565556 TRIM52Q96A61 297 aa13.73□□□□□ -0.21
CNEP1R1-206ENST00000565556 MLH3Q9UHC1 1453 aa13.7□□□□□ -0.22
CNEP1R1-206ENST00000565556 MYT1LQ9UL68 1186 aa13.7□□□□□ -0.22
CNEP1R1-206ENST00000565556 ERBINQ96RT1 1412 aa13.7□□□□□ -0.22
CNEP1R1-206ENST00000565556 RICTORQ6R327 1708 aa13.7□□□□□ -0.22
CNEP1R1-206ENST00000565556 HECW2Q9P2P5 1572 aa13.7□□□□□ -0.22
CNEP1R1-206ENST00000565556 KIDINS220Q9ULH0 1771 aa13.69□□□□□ -0.22
CNEP1R1-206ENST00000565556 RAPGEF3O95398 923 aa13.67□□□□□ -0.22
CNEP1R1-206ENST00000565556 MPHOSPH9Q99550 1183 aa13.66□□□□□ -0.22
CNEP1R1-206ENST00000565556 KDM5DQ9BY66 1539 aa13.66□□□□□ -0.22
CNEP1R1-206ENST00000565556 DHX29Q7Z478 1369 aaKnown RBP13.65□□□□□ -0.22
CNEP1R1-206ENST00000565556 ZMYM4Q5VZL5 1548 aa13.65□□□□□ -0.22
CNEP1R1-206ENST00000565556 UNC13BO14795 1591 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms