RNA–Protein interactions for RNA: ENST00000564534.1

LINC01858-201, Transcript of long intergenic non-protein coding RNA 1858, humanhuman

TSL 1 (best) BASIC

Gene LINC01858, Length 1,838 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01858-201ENST00000564534 EPRSP07814 1512 aaKnown RBP14.12□□□□□ -0.15
LINC01858-201ENST00000564534 ARID3CA6NKF2 412 aa14.12□□□□□ -0.15
LINC01858-201ENST00000564534 ATP10BO94823 1461 aa14.11□□□□□ -0.15
LINC01858-201ENST00000564534 ZCCHC11Q5TAX3 1644 aaKnown RBP14.1□□□□□ -0.15
LINC01858-201ENST00000564534 CDK13Q14004 1512 aaKnown RBP14.09□□□□□ -0.15
LINC01858-201ENST00000564534 CDK11AQ9UQ88 783 aaPredicted RBP14.08□□□□□ -0.15
LINC01858-201ENST00000564534 LRRIQ1Q96JM4 1722 aa14.08□□□□□ -0.16
LINC01858-201ENST00000564534 MAP3K1Q13233 1512 aa14.07□□□□□ -0.16
LINC01858-201ENST00000564534 CFAP43Q8NDM7 1665 aa14.06□□□□□ -0.16
LINC01858-201ENST00000564534 REM2Q8IYK8 340 aaPredicted RBP14.06□□□□□ -0.16
LINC01858-201ENST00000564534 ZNF692Q9BU19 519 aaPredicted RBP14.06□□□□□ -0.16
LINC01858-201ENST00000564534 TIAM1Q13009 1591 aa14.05□□□□□ -0.16
LINC01858-201ENST00000564534 PLEKHD1A6NEE1 506 aa14.05□□□□□ -0.16
LINC01858-201ENST00000564534 MAPKBP1O60336 1514 aa14.05□□□□□ -0.16
LINC01858-201ENST00000564534 ASXL2Q76L83 1435 aa14.03□□□□□ -0.16
LINC01858-201ENST00000564534 POTEHQ6S545 545 aa14.03□□□□□ -0.16
LINC01858-201ENST00000564534 CHRDL2Q6WN34 429 aa14.03□□□□□ -0.16
LINC01858-201ENST00000564534 WDR7Q9Y4E6 1490 aa14.02□□□□□ -0.16
LINC01858-201ENST00000564534 MTUS2Q5JR59 1369 aa14.02□□□□□ -0.17
LINC01858-201ENST00000564534 TROQ12816 1431 aaPredicted RBP14□□□□□ -0.17
LINC01858-201ENST00000564534 EHBP1L1Q8N3D4 1523 aa14□□□□□ -0.17
LINC01858-201ENST00000564534 LRRC9Q6ZRR7 1453 aa13.99□□□□□ -0.17
LINC01858-201ENST00000564534 MAGI3Q5TCQ9 1506 aa13.98□□□□□ -0.17
LINC01858-201ENST00000564534 KCNH8Q96L42 1107 aa13.97□□□□□ -0.17
LINC01858-201ENST00000564534 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
LINC01858-201ENST00000564534 KIF14Q15058 1648 aa13.96□□□□□ -0.17
LINC01858-201ENST00000564534 KANK4Q5T7N3 995 aaPredicted RBP13.96□□□□□ -0.17
LINC01858-201ENST00000564534 SUPT6HQ7KZ85 1726 aaKnown RBP13.94□□□□□ -0.18
LINC01858-201ENST00000564534 ABCC10Q5T3U5 1492 aa13.93□□□□□ -0.18
LINC01858-201ENST00000564534 DIP2BQ9P265 1576 aa13.92□□□□□ -0.18
LINC01858-201ENST00000564534 GLI2P10070 1586 aa13.91□□□□□ -0.18
LINC01858-201ENST00000564534 FAM69CQ0P6D2 419 aa13.9□□□□□ -0.18
LINC01858-201ENST00000564534 PPARGC1BQ86YN6 1023 aaKnown RBP13.9□□□□□ -0.18
LINC01858-201ENST00000564534 NCOA2Q15596 1464 aa13.9□□□□□ -0.18
LINC01858-201ENST00000564534 PITPNM1O00562 1244 aa13.9□□□□□ -0.18
LINC01858-201ENST00000564534 ABCA9Q8IUA7 1624 aa13.9□□□□□ -0.18
LINC01858-201ENST00000564534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC01858-201ENST00000564534 TTC37Q6PGP7 1564 aa13.88□□□□□ -0.19
LINC01858-201ENST00000564534 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
LINC01858-201ENST00000564534 SPDYE1Q8NFV5 336 aaPredicted RBP13.87□□□□□ -0.19
LINC01858-201ENST00000564534 KIF13AQ9H1H9 1805 aa13.87□□□□□ -0.19
LINC01858-201ENST00000564534 CD109Q6YHK3 1445 aa13.86□□□□□ -0.19
LINC01858-201ENST00000564534 MYO5CQ9NQX4 1742 aa13.85□□□□□ -0.19
LINC01858-201ENST00000564534 MAP3K4Q9Y6R4 1608 aa13.85□□□□□ -0.19
LINC01858-201ENST00000564534 ITSN2Q9NZM3 1697 aa13.84□□□□□ -0.19
LINC01858-201ENST00000564534 GPATCH8Q9UKJ3 1502 aaKnown RBP13.83□□□□□ -0.2
LINC01858-201ENST00000564534 PLCH2O75038 1416 aa13.83□□□□□ -0.2
LINC01858-201ENST00000564534 MYOM3Q5VTT5 1437 aa13.83□□□□□ -0.2
LINC01858-201ENST00000564534 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
LINC01858-201ENST00000564534 ARAP3Q8WWN8 1544 aa13.83□□□□□ -0.2
LINC01858-201ENST00000564534 PREX2Q70Z35 1606 aa13.82□□□□□ -0.2
LINC01858-201ENST00000564534 PHLDB1Q86UU1 1377 aa13.82□□□□□ -0.2
LINC01858-201ENST00000564534 CDC42BPAQ5VT25 1732 aa13.82□□□□□ -0.2
LINC01858-201ENST00000564534 ARHGAP5Q13017 1502 aa13.81□□□□□ -0.2
LINC01858-201ENST00000564534 CFDP1Q9UEE9 299 aaPredicted RBP13.81□□□□□ -0.2
LINC01858-201ENST00000564534 TEX14Q8IWB6 1497 aa13.8□□□□□ -0.2
LINC01858-201ENST00000564534 MIA2Q96PC5 1412 aa13.8□□□□□ -0.2
LINC01858-201ENST00000564534 CDC42BPBQ9Y5S2 1711 aa13.79□□□□□ -0.2
LINC01858-201ENST00000564534 TSPOAP1O95153 1857 aa13.79□□□□□ -0.2
LINC01858-201ENST00000564534 EFCAB2Q5VUJ9 269 aa13.79□□□□□ -0.2
LINC01858-201ENST00000564534 CFAP74Q9C0B2 1584 aa13.79□□□□□ -0.2
LINC01858-201ENST00000564534 FANCAO15360 1455 aa13.79□□□□□ -0.2
LINC01858-201ENST00000564534 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
LINC01858-201ENST00000564534 FGD6Q6ZV73 1430 aa13.78□□□□□ -0.2
LINC01858-201ENST00000564534 ZNF777Q9ULD5 760 aaPredicted RBP13.76□□□□□ -0.21
LINC01858-201ENST00000564534 NEO1Q92859 1461 aa13.76□□□□□ -0.21
LINC01858-201ENST00000564534 PPRC1Q5VV67 1664 aaKnown RBP13.76□□□□□ -0.21
LINC01858-201ENST00000564534 PIP4P2Q8N4L2 257 aa13.74□□□□□ -0.21
LINC01858-201ENST00000564534 PLEKHH2Q8IVE3 1493 aa13.74□□□□□ -0.21
LINC01858-201ENST00000564534 PTPN23Q9H3S7 1636 aa13.74□□□□□ -0.21
LINC01858-201ENST00000564534 AKNAQ7Z591 1439 aa13.73□□□□□ -0.21
LINC01858-201ENST00000564534 CAMSAP2Q08AD1 1489 aa13.73□□□□□ -0.21
LINC01858-201ENST00000564534 RRBP1Q9P2E9 1410 aaKnown RBP13.73□□□□□ -0.21
LINC01858-201ENST00000564534 SAMD9LQ8IVG5 1584 aa13.73□□□□□ -0.21
LINC01858-201ENST00000564534 ADGRL1O94910 1474 aa13.72□□□□□ -0.21
LINC01858-201ENST00000564534 TCOF1Q13428 1488 aaKnown RBP13.72□□□□□ -0.21
LINC01858-201ENST00000564534 FAM50AQ14320 339 aaKnown RBP13.71□□□□□ -0.21
LINC01858-201ENST00000564534 ABCC1P33527 1531 aa13.71□□□□□ -0.21
LINC01858-201ENST00000564534 KIAA1107Q9UPP5 1409 aa13.71□□□□□ -0.21
LINC01858-201ENST00000564534 ZNF644Q9H582 1327 aaPredicted RBP13.71□□□□□ -0.22
LINC01858-201ENST00000564534 FXR2P51116 673 aaKnown RBP eCLIP13.71□□□□□ -0.22
LINC01858-201ENST00000564534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC01858-201ENST00000564534 SYCP2Q9BX26 1530 aa13.69□□□□□ -0.22
LINC01858-201ENST00000564534 SCAPERQ9BY12 1400 aa13.69□□□□□ -0.22
LINC01858-201ENST00000564534 RSPH4AQ5TD94 716 aa13.67□□□□□ -0.22
LINC01858-201ENST00000564534 DENND4BO75064 1496 aaPredicted RBP13.67□□□□□ -0.22
LINC01858-201ENST00000564534 HNRNPMP52272 730 aaKnown RBP eCLIP13.67□□□□□ -0.22
LINC01858-201ENST00000564534 ARHGEF5Q12774 1597 aa13.66□□□□□ -0.22
LINC01858-201ENST00000564534 ARHGEF12Q9NZN5 1544 aa13.66□□□□□ -0.22
LINC01858-201ENST00000564534 ZNF518AQ6AHZ1 1483 aa13.65□□□□□ -0.22
LINC01858-201ENST00000564534 MBD5Q9P267 1494 aa13.65□□□□□ -0.22
LINC01858-201ENST00000564534 POGZQ7Z3K3 1410 aa13.65□□□□□ -0.22
LINC01858-201ENST00000564534 CCDC141Q6ZP82 1450 aa13.65□□□□□ -0.22
LINC01858-201ENST00000564534 PRR29P0C7W0 189 aa13.64□□□□□ -0.23
LINC01858-201ENST00000564534 DNMT1P26358 1616 aaKnown RBP13.64□□□□□ -0.23
LINC01858-201ENST00000564534 TRAPPC8Q9Y2L5 1435 aa13.63□□□□□ -0.23
LINC01858-201ENST00000564534 KDM6BO15054 1643 aa13.63□□□□□ -0.23
LINC01858-201ENST00000564534 DAPK1P53355 1430 aa13.63□□□□□ -0.23
LINC01858-201ENST00000564534 TSPY4P0CV99 314 aa13.62□□□□□ -0.23
LINC01858-201ENST00000564534 TSPY10P0CW01 314 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms