RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 CLSPNQ9HAW4 1339 aa13.03□□□□□ -0.32
TCF4-224ENST00000564403 MYOM3Q5VTT5 1437 aa13.02□□□□□ -0.33
TCF4-224ENST00000564403 HAP1P54257 671 aaPredicted RBP13.01□□□□□ -0.33
TCF4-224ENST00000564403 DHX37Q8IY37 1157 aaKnown RBP13.01□□□□□ -0.33
TCF4-224ENST00000564403 MAPKBP1O60336 1514 aa13□□□□□ -0.33
TCF4-224ENST00000564403 ZNF644Q9H582 1327 aaPredicted RBP13□□□□□ -0.33
TCF4-224ENST00000564403 KIAA0556O60303 1618 aa13□□□□□ -0.33
TCF4-224ENST00000564403 PLB1Q6P1J6 1458 aa13□□□□□ -0.33
TCF4-224ENST00000564403 NUP153P49790 1475 aaKnown RBP12.98□□□□□ -0.33
TCF4-224ENST00000564403 HECW1Q76N89 1606 aa12.98□□□□□ -0.33
TCF4-224ENST00000564403 EHBP1L1Q8N3D4 1523 aa12.98□□□□□ -0.33
TCF4-224ENST00000564403 CCDC18Q5T9S5 1454 aa12.98□□□□□ -0.33
TCF4-224ENST00000564403 MIER1Q8N108 512 aa12.97□□□□□ -0.33
TCF4-224ENST00000564403 SUPT6HQ7KZ85 1726 aaKnown RBP12.97□□□□□ -0.33
TCF4-224ENST00000564403 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.97□□□□□ -0.33
TCF4-224ENST00000564403 PRG4Q92954 1404 aaPredicted RBP12.96□□□□□ -0.34
TCF4-224ENST00000564403 NUP160Q12769 1436 aa12.95□□□□□ -0.34
TCF4-224ENST00000564403 ARHGEF11O15085 1522 aa12.94□□□□□ -0.34
TCF4-224ENST00000564403 PTPN23Q9H3S7 1636 aa12.93□□□□□ -0.34
TCF4-224ENST00000564403 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
TCF4-224ENST00000564403 ZNF777Q9ULD5 760 aaPredicted RBP12.93□□□□□ -0.34
TCF4-224ENST00000564403 NAIPQ13075 1403 aa12.93□□□□□ -0.34
TCF4-224ENST00000564403 BRD2P25440 801 aaKnown RBP12.91□□□□□ -0.34
TCF4-224ENST00000564403 YTHDC1Q96MU7 727 aaKnown RBP12.91□□□□□ -0.34
TCF4-224ENST00000564403 HIRIP3Q9BW71 556 aaPredicted RBP12.91□□□□□ -0.34
TCF4-224ENST00000564403 RAPGEF6Q8TEU7 1601 aa12.91□□□□□ -0.34
TCF4-224ENST00000564403 HFM1A2PYH4 1435 aa12.91□□□□□ -0.34
TCF4-224ENST00000564403 CARMIL2Q6F5E8 1435 aa12.91□□□□□ -0.34
TCF4-224ENST00000564403 CDK11AQ9UQ88 783 aaPredicted RBP12.91□□□□□ -0.34
TCF4-224ENST00000564403 TRIM52Q96A61 297 aa12.9□□□□□ -0.34
TCF4-224ENST00000564403 A0A0U1RQG5 324 aaPredicted RBP12.9□□□□□ -0.34
TCF4-224ENST00000564403 ERICH6BQ5W0A0 696 aa12.9□□□□□ -0.34
TCF4-224ENST00000564403 FOXD1Q16676 465 aa12.89□□□□□ -0.35
TCF4-224ENST00000564403 CFDP1Q9UEE9 299 aaPredicted RBP12.87□□□□□ -0.35
TCF4-224ENST00000564403 TCOF1Q13428 1488 aaKnown RBP12.85□□□□□ -0.35
TCF4-224ENST00000564403 PLEKHD1A6NEE1 506 aa12.85□□□□□ -0.35
TCF4-224ENST00000564403 AAMPQ13685 434 aa12.85□□□□□ -0.35
TCF4-224ENST00000564403 KDM6BO15054 1643 aa12.85□□□□□ -0.35
TCF4-224ENST00000564403 MIA2Q96PC5 1412 aa12.85□□□□□ -0.35
TCF4-224ENST00000564403 PTPRGP23470 1445 aa12.84□□□□□ -0.35
TCF4-224ENST00000564403 TROQ12816 1431 aaPredicted RBP12.84□□□□□ -0.35
TCF4-224ENST00000564403 UACAQ9BZF9 1416 aa12.84□□□□□ -0.35
TCF4-224ENST00000564403 BCANQ96GW7 911 aa12.84□□□□□ -0.35
TCF4-224ENST00000564403 FBXO3Q9UK99 471 aa12.84□□□□□ -0.35
TCF4-224ENST00000564403 ATP10BO94823 1461 aa12.83□□□□□ -0.36
TCF4-224ENST00000564403 KIF14Q15058 1648 aa12.83□□□□□ -0.36
TCF4-224ENST00000564403 PPP1R15AO75807 674 aaPredicted RBP12.83□□□□□ -0.36
TCF4-224ENST00000564403 ABCC5O15440 1437 aa12.82□□□□□ -0.36
TCF4-224ENST00000564403 CHD1O14646 1710 aa12.81□□□□□ -0.36
TCF4-224ENST00000564403 MPHOSPH9Q99550 1183 aa12.81□□□□□ -0.36
TCF4-224ENST00000564403 DAPK1P53355 1430 aa12.81□□□□□ -0.36
TCF4-224ENST00000564403 GPATCH8Q9UKJ3 1502 aaKnown RBP12.8□□□□□ -0.36
TCF4-224ENST00000564403 ERCC6L2Q5T890 1561 aa12.8□□□□□ -0.36
TCF4-224ENST00000564403 DENND4BO75064 1496 aaPredicted RBP12.79□□□□□ -0.36
TCF4-224ENST00000564403 TONSLQ96HA7 1378 aa12.79□□□□□ -0.36
TCF4-224ENST00000564403 ABCA8O94911 1581 aa12.78□□□□□ -0.36
TCF4-224ENST00000564403 HNRNPMP52272 730 aaKnown RBP eCLIP12.77□□□□□ -0.377e-6■■■□□ 17
TCF4-224ENST00000564403 KCNH8Q96L42 1107 aa12.77□□□□□ -0.37
TCF4-224ENST00000564403 DDX10Q13206 875 aaKnown RBP12.76□□□□□ -0.37
TCF4-224ENST00000564403 CAMSAP2Q08AD1 1489 aa12.76□□□□□ -0.37
TCF4-224ENST00000564403 PAXIP1Q6ZW49 1069 aaPredicted RBP12.74□□□□□ -0.37
TCF4-224ENST00000564403 SLC4A1APQ9BWU0 796 aaKnown RBP12.74□□□□□ -0.37
TCF4-224ENST00000564403 CNKSR2Q8WXI2 1034 aa12.74□□□□□ -0.37
TCF4-224ENST00000564403 RBM10P98175 930 aaKnown RBP12.73□□□□□ -0.37
TCF4-224ENST00000564403 AKNAQ7Z591 1439 aa12.72□□□□□ -0.37
TCF4-224ENST00000564403 RSPH6AQ9H0K4 717 aa12.72□□□□□ -0.37
TCF4-224ENST00000564403 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.72□□□□□ -0.37
TCF4-224ENST00000564403 DNMT1P26358 1616 aaKnown RBP12.72□□□□□ -0.37
TCF4-224ENST00000564403 NCOA1Q15788 1441 aa12.71□□□□□ -0.37
TCF4-224ENST00000564403 ROCK1Q13464 1354 aa12.71□□□□□ -0.38
TCF4-224ENST00000564403 ABCC10Q5T3U5 1492 aa12.71□□□□□ -0.38
TCF4-224ENST00000564403 L3MBTL2Q969R5 705 aa12.7□□□□□ -0.38
TCF4-224ENST00000564403 GCC2Q8IWJ2 1684 aa12.7□□□□□ -0.38
TCF4-224ENST00000564403 RSPH4AQ5TD94 716 aa12.7□□□□□ -0.38
TCF4-224ENST00000564403 DEKP35659 375 aaKnown RBP12.69□□□□□ -0.38
TCF4-224ENST00000564403 TSPY4P0CV99 314 aa12.67□□□□□ -0.38
TCF4-224ENST00000564403 TSPY10P0CW01 314 aa12.67□□□□□ -0.38
TCF4-224ENST00000564403 CDC42BPAQ5VT25 1732 aa12.67□□□□□ -0.38
TCF4-224ENST00000564403 KDM5BQ9UGL1 1544 aa12.66□□□□□ -0.38
TCF4-224ENST00000564403 ADCY10Q96PN6 1610 aa12.66□□□□□ -0.38
TCF4-224ENST00000564403 CDK11BP21127 795 aaKnown RBP12.66□□□□□ -0.38
TCF4-224ENST00000564403 ZMYND15Q9H091 742 aa12.66□□□□□ -0.38
TCF4-224ENST00000564403 ANKRD30BQ9BXX2 1392 aa12.65□□□□□ -0.38
TCF4-224ENST00000564403 SHROOM2Q13796 1616 aa12.65□□□□□ -0.38
TCF4-224ENST00000564403 PKD2Q13563 968 aa12.65□□□□□ -0.38
TCF4-224ENST00000564403 ANKRD30AQ9BXX3 1397 aa12.65□□□□□ -0.38
TCF4-224ENST00000564403 ITSN2Q9NZM3 1697 aa12.64□□□□□ -0.39
TCF4-224ENST00000564403 NBPF8Q3BBV2 869 aa12.64□□□□□ -0.39
TCF4-224ENST00000564403 C9orf84Q5VXU9 1444 aa12.63□□□□□ -0.39
TCF4-224ENST00000564403 ANKRD50Q9ULJ7 1429 aa12.63□□□□□ -0.39
TCF4-224ENST00000564403 PZPP20742 1482 aa12.62□□□□□ -0.39
TCF4-224ENST00000564403 TMEM132AQ24JP5 1023 aa12.62□□□□□ -0.39
TCF4-224ENST00000564403 GLIPR1L2Q4G1C9 344 aa12.62□□□□□ -0.39
TCF4-224ENST00000564403 NUP155O75694 1391 aa12.61□□□□□ -0.39
TCF4-224ENST00000564403 HSPA5P11021 654 aaKnown RBP12.61□□□□□ -0.39
TCF4-224ENST00000564403 ZNF326Q5BKZ1 582 aaKnown RBP12.61□□□□□ -0.39
TCF4-224ENST00000564403 MBD5Q9P267 1494 aa12.61□□□□□ -0.39
TCF4-224ENST00000564403 CLASP1Q7Z460 1538 aa12.6□□□□□ -0.39
TCF4-224ENST00000564403 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.6□□□□□ -0.39
TCF4-224ENST00000564403 MYT1LQ9UL68 1186 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 512.8 ms