RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 GPATCH11Q8N954 259 aa7.91□□□□□ -1.14
TUBGCP4-207ENST00000563963 ZNF622Q969S3 477 aaKnown RBP eCLIP7.91□□□□□ -1.14
TUBGCP4-207ENST00000563963 ANAPC15P60006 121 aa7.91□□□□□ -1.14
TUBGCP4-207ENST00000563963 TMED8Q6PL24 325 aaPredicted RBP7.91□□□□□ -1.14
TUBGCP4-207ENST00000563963 FBLN2P98095 1184 aa7.9□□□□□ -1.15
TUBGCP4-207ENST00000563963 CALD1Q05682 793 aaKnown RBP7.9□□□□□ -1.15
TUBGCP4-207ENST00000563963 AXDND1Q5T1B0 1012 aaPredicted RBP7.89□□□□□ -1.15
TUBGCP4-207ENST00000563963 STAC3Q96MF2 364 aa7.89□□□□□ -1.15
TUBGCP4-207ENST00000563963 USP35Q9P2H5 1018 aa7.89□□□□□ -1.15
TUBGCP4-207ENST00000563963 PHF14O94880 888 aa7.88□□□□□ -1.15
TUBGCP4-207ENST00000563963 IRX3P78415 501 aaPredicted RBP7.87□□□□□ -1.15
TUBGCP4-207ENST00000563963 TNNT2P45379 298 aaPredicted RBP7.87□□□□□ -1.15
TUBGCP4-207ENST00000563963 CC2D2BQ6DHV5 1058 aa7.87□□□□□ -1.15
TUBGCP4-207ENST00000563963 DNAJC2Q99543 621 aaKnown RBP7.87□□□□□ -1.15
TUBGCP4-207ENST00000563963 PRDM2Q13029 1718 aa7.87□□□□□ -1.15
TUBGCP4-207ENST00000563963 KIF21AQ7Z4S6 1674 aa7.87□□□□□ -1.15
TUBGCP4-207ENST00000563963 C11orf95C9JLR9 678 aaPredicted RBP7.85□□□□□ -1.15
TUBGCP4-207ENST00000563963 WDR97A6NE52 1622 aa7.85□□□□□ -1.15
TUBGCP4-207ENST00000563963 CADPSQ9ULU8 1353 aa7.84□□□□□ -1.15
TUBGCP4-207ENST00000563963 PLCD3Q8N3E9 789 aa7.84□□□□□ -1.15
TUBGCP4-207ENST00000563963 CEP164Q9UPV0 1460 aa7.83□□□□□ -1.16
TUBGCP4-207ENST00000563963 PRDM16Q9HAZ2 1276 aa7.83□□□□□ -1.16
TUBGCP4-207ENST00000563963 HDAC5Q9UQL6 1122 aa7.83□□□□□ -1.16
TUBGCP4-207ENST00000563963 FAM43BQ6ZT52 329 aaPredicted RBP7.83□□□□□ -1.16
TUBGCP4-207ENST00000563963 OSCARQ8IYS5 282 aa7.82□□□□□ -1.16
TUBGCP4-207ENST00000563963 VGFO15240 615 aaPredicted RBP7.82□□□□□ -1.16
TUBGCP4-207ENST00000563963 ABCC8Q09428 1581 aa7.82□□□□□ -1.16
TUBGCP4-207ENST00000563963 MSH5O43196 834 aa7.82□□□□□ -1.16
TUBGCP4-207ENST00000563963 FAM43AQ8N2R8 423 aa7.82□□□□□ -1.16
TUBGCP4-207ENST00000563963 FKBP8Q14318 412 aa7.81□□□□□ -1.16
TUBGCP4-207ENST00000563963 RAD21O60216 631 aa7.81□□□□□ -1.16
TUBGCP4-207ENST00000563963 ANP32AP39687 249 aaKnown RBP7.81□□□□□ -1.16
TUBGCP4-207ENST00000563963 TRIM44Q96DX7 344 aaPredicted RBP7.8□□□□□ -1.16
TUBGCP4-207ENST00000563963 KCNG1Q9UIX4 513 aa7.8□□□□□ -1.16
TUBGCP4-207ENST00000563963 RGS3P49796 1198 aa7.8□□□□□ -1.16
TUBGCP4-207ENST00000563963 RBM25P49756 843 aaKnown RBP7.8□□□□□ -1.16
TUBGCP4-207ENST00000563963 CC2D1BQ5T0F9 858 aaKnown RBP7.8□□□□□ -1.16
TUBGCP4-207ENST00000563963 CCDC27Q2M243 656 aa7.79□□□□□ -1.16
TUBGCP4-207ENST00000563963 RGS22Q8NE09 1264 aa7.78□□□□□ -1.16
TUBGCP4-207ENST00000563963 MAFGO15525 162 aa7.78□□□□□ -1.16
TUBGCP4-207ENST00000563963 NOP58Q9Y2X3 529 aaKnown RBP7.78□□□□□ -1.16
TUBGCP4-207ENST00000563963 ILDR2Q71H61 639 aa7.77□□□□□ -1.17
TUBGCP4-207ENST00000563963 NESP48681 1621 aa7.77□□□□□ -1.17
TUBGCP4-207ENST00000563963 FAM50AQ14320 339 aaKnown RBP7.77□□□□□ -1.17
TUBGCP4-207ENST00000563963 KCTD17Q8N5Z5 321 aa7.76□□□□□ -1.17
TUBGCP4-207ENST00000563963 DNTTIP2Q5QJE6 756 aaKnown RBP7.76□□□□□ -1.17
TUBGCP4-207ENST00000563963 FAM9BQ8IZU0 186 aa7.76□□□□□ -1.17
TUBGCP4-207ENST00000563963 ZNF692Q9BU19 519 aaPredicted RBP7.76□□□□□ -1.17
TUBGCP4-207ENST00000563963 IFT140Q96RY7 1462 aa7.75□□□□□ -1.17
TUBGCP4-207ENST00000563963 FAM177A1Q8N128 213 aaPredicted RBP7.75□□□□□ -1.17
TUBGCP4-207ENST00000563963 CENPJQ9HC77 1338 aaPredicted RBP7.75□□□□□ -1.17
TUBGCP4-207ENST00000563963 PLEKHD1A6NEE1 506 aa7.74□□□□□ -1.17
TUBGCP4-207ENST00000563963 TAF3Q5VWG9 929 aa7.74□□□□□ -1.17
TUBGCP4-207ENST00000563963 LAS1LQ9Y4W2 734 aaKnown RBP7.74□□□□□ -1.17
TUBGCP4-207ENST00000563963 HSP90AB4PQ58FF6 505 aa7.74□□□□□ -1.17
TUBGCP4-207ENST00000563963 CFTRP13569 1480 aa7.74□□□□□ -1.17
TUBGCP4-207ENST00000563963 PDCL3Q9H2J4 239 aa7.74□□□□□ -1.17
TUBGCP4-207ENST00000563963 PRDM4Q9UKN5 801 aa7.73□□□□□ -1.17
TUBGCP4-207ENST00000563963 TOP2AP11388 1531 aaKnown RBP7.73□□□□□ -1.17
TUBGCP4-207ENST00000563963 FANCD2Q9BXW9 1451 aa7.73□□□□□ -1.17
TUBGCP4-207ENST00000563963 CYB5RLQ6IPT4 315 aa7.72□□□□□ -1.17
TUBGCP4-207ENST00000563963 NECTIN2Q92692 538 aa7.72□□□□□ -1.17
TUBGCP4-207ENST00000563963 SOX12O15370 315 aa7.71□□□□□ -1.18
TUBGCP4-207ENST00000563963 CEP120Q8N960 986 aa7.71□□□□□ -1.18
TUBGCP4-207ENST00000563963 RSF1Q96T23 1441 aaPredicted RBP7.71□□□□□ -1.18
TUBGCP4-207ENST00000563963 CASC1Q6TDU7 716 aa7.71□□□□□ -1.18
TUBGCP4-207ENST00000563963 KDM4AO75164 1064 aa7.7□□□□□ -1.18
TUBGCP4-207ENST00000563963 ZNF830Q96NB3 372 aaPredicted RBP7.7□□□□□ -1.18
TUBGCP4-207ENST00000563963 MROH2BQ7Z745 1585 aa7.7□□□□□ -1.18
TUBGCP4-207ENST00000563963 PNNQ9H307 717 aaKnown RBP7.7□□□□□ -1.18
TUBGCP4-207ENST00000563963 ZNF428Q96B54 188 aa7.69□□□□□ -1.18
TUBGCP4-207ENST00000563963 MMP14P50281 582 aa7.69□□□□□ -1.18
TUBGCP4-207ENST00000563963 MAPK8IP2Q13387 824 aaPredicted RBP7.69□□□□□ -1.18
TUBGCP4-207ENST00000563963 MAP7D2Q96T17 732 aa7.69□□□□□ -1.18
TUBGCP4-207ENST00000563963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.68□□□□□ -1.18
TUBGCP4-207ENST00000563963 RIMBP3CA6NJZ7 1639 aa7.67□□□□□ -1.18
TUBGCP4-207ENST00000563963 RIMBP3BA6NNM3 1639 aa7.67□□□□□ -1.18
TUBGCP4-207ENST00000563963 RIMBP3Q9UFD9 1639 aa7.67□□□□□ -1.18
TUBGCP4-207ENST00000563963 TTC36A6NLP5 189 aa7.67□□□□□ -1.18
TUBGCP4-207ENST00000563963 MYCNP04198 464 aaPredicted RBP7.66□□□□□ -1.18
TUBGCP4-207ENST00000563963 VGLL3A8MV65 326 aa7.66□□□□□ -1.18
TUBGCP4-207ENST00000563963 SSR1P43307 286 aaKnown RBP7.66□□□□□ -1.18
TUBGCP4-207ENST00000563963 FOXD1Q16676 465 aa7.66□□□□□ -1.18
TUBGCP4-207ENST00000563963 FOXD4L5Q5VV16 416 aaPredicted RBP7.66□□□□□ -1.18
TUBGCP4-207ENST00000563963 SMAP1Q8IYB5 467 aaPredicted RBP7.66□□□□□ -1.18
TUBGCP4-207ENST00000563963 FOXD4L4Q8WXT5 416 aaPredicted RBP7.66□□□□□ -1.18
TUBGCP4-207ENST00000563963 MTMR7Q9Y216 660 aa7.66□□□□□ -1.18
TUBGCP4-207ENST00000563963 NBPF20Q3BBV1 942 aa7.65□□□□□ -1.18
TUBGCP4-207ENST00000563963 RALBP1Q15311 655 aa7.65□□□□□ -1.18
TUBGCP4-207ENST00000563963 DNMBPQ6XZF7 1577 aa7.65□□□□□ -1.19
TUBGCP4-207ENST00000563963 WASHC2CQ9Y4E1 1318 aa7.65□□□□□ -1.19
TUBGCP4-207ENST00000563963 EXOC8Q8IYI6 725 aa7.65□□□□□ -1.19
TUBGCP4-207ENST00000563963 NBPF1Q3BBV0 1214 aa7.64□□□□□ -1.19
TUBGCP4-207ENST00000563963 HSP90AB3PQ58FF7 597 aa7.64□□□□□ -1.19
TUBGCP4-207ENST00000563963 ZBTB47Q9UFB7 747 aaPredicted RBP7.64□□□□□ -1.19
TUBGCP4-207ENST00000563963 NBPF11Q86T75 865 aa7.64□□□□□ -1.19
TUBGCP4-207ENST00000563963 TCERG1O14776 1098 aaKnown RBP7.64□□□□□ -1.19
TUBGCP4-207ENST00000563963 TMEM51Q9NW97 253 aa7.63□□□□□ -1.19
TUBGCP4-207ENST00000563963 TMTC2Q8N394 836 aa7.63□□□□□ -1.19
TUBGCP4-207ENST00000563963 TPM2P07951 284 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms