RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 CDC42BPBQ9Y5S2 1711 aa27.11■■□□□ 1.93
SPSB3-202ENST00000563668 PREX2Q70Z35 1606 aa27.05■■□□□ 1.92
SPSB3-202ENST00000563668 POGZQ7Z3K3 1410 aa27.05■■□□□ 1.92
SPSB3-202ENST00000563668 MTUS2Q5JR59 1369 aa27.05■■□□□ 1.92
SPSB3-202ENST00000563668 CDC42BPAQ5VT25 1732 aa27.05■■□□□ 1.92
SPSB3-202ENST00000563668 YEATS2Q9ULM3 1422 aa27.03■■□□□ 1.92
SPSB3-202ENST00000563668 VPS8Q8N3P4 1428 aa27.03■■□□□ 1.92
SPSB3-202ENST00000563668 ZMYM4Q5VZL5 1548 aa27.02■■□□□ 1.92
SPSB3-202ENST00000563668 GPATCH8Q9UKJ3 1502 aaKnown RBP27.02■■□□□ 1.92
SPSB3-202ENST00000563668 AFAP1Q8N556 730 aa27.01■■□□□ 1.91
SPSB3-202ENST00000563668 ARHGEF12Q9NZN5 1544 aa27■■□□□ 1.91
SPSB3-202ENST00000563668 ARHGEF40Q8TER5 1519 aa26.99■■□□□ 1.91
SPSB3-202ENST00000563668 ZNF777Q9ULD5 760 aaPredicted RBP26.96■■□□□ 1.91
SPSB3-202ENST00000563668 ZFYVE16Q7Z3T8 1539 aa26.95■■□□□ 1.91
SPSB3-202ENST00000563668 TRAPPC8Q9Y2L5 1435 aa26.95■■□□□ 1.91
SPSB3-202ENST00000563668 EHBP1L1Q8N3D4 1523 aa26.95■■□□□ 1.9
SPSB3-202ENST00000563668 SIGLEC1Q9BZZ2 1709 aa26.94■■□□□ 1.9
SPSB3-202ENST00000563668 ABCC1P33527 1531 aa26.94■■□□□ 1.9
SPSB3-202ENST00000563668 ARID4BQ4LE39 1312 aaPredicted RBP26.94■■□□□ 1.9
SPSB3-202ENST00000563668 MAGI2Q86UL8 1455 aa26.94■■□□□ 1.9
SPSB3-202ENST00000563668 CCNB3Q8WWL7 1395 aa26.93■■□□□ 1.9
SPSB3-202ENST00000563668 TIAM1Q13009 1591 aa26.93■■□□□ 1.9
SPSB3-202ENST00000563668 ZNF518AQ6AHZ1 1483 aa26.92■■□□□ 1.9
SPSB3-202ENST00000563668 SAMD9LQ8IVG5 1584 aa26.92■■□□□ 1.9
SPSB3-202ENST00000563668 CFDP1Q9UEE9 299 aaPredicted RBP26.9■■□□□ 1.9
SPSB3-202ENST00000563668 KDM5CP41229 1560 aa26.9■■□□□ 1.9
SPSB3-202ENST00000563668 ITSN2Q9NZM3 1697 aa26.88■■□□□ 1.89
SPSB3-202ENST00000563668 HNRNPMP52272 730 aaKnown RBP eCLIP26.88■■□□□ 1.89
SPSB3-202ENST00000563668 KANK4Q5T7N3 995 aaPredicted RBP26.88■■□□□ 1.89
SPSB3-202ENST00000563668 ZNF644Q9H582 1327 aaPredicted RBP26.87■■□□□ 1.89
SPSB3-202ENST00000563668 ADAMTSL3P82987 1691 aa26.87■■□□□ 1.89
SPSB3-202ENST00000563668 BCORL1Q5H9F3 1711 aa26.86■■□□□ 1.89
SPSB3-202ENST00000563668 NCOA2Q15596 1464 aa26.85■■□□□ 1.89
SPSB3-202ENST00000563668 SYCP2Q9BX26 1530 aa26.84■■□□□ 1.89
SPSB3-202ENST00000563668 ATP10AO60312 1499 aa26.84■■□□□ 1.89
SPSB3-202ENST00000563668 LRRC9Q6ZRR7 1453 aa26.84■■□□□ 1.89
SPSB3-202ENST00000563668 MYT1LQ9UL68 1186 aa26.83■■□□□ 1.89
SPSB3-202ENST00000563668 HECW2Q9P2P5 1572 aa26.82■■□□□ 1.88
SPSB3-202ENST00000563668 MLH3Q9UHC1 1453 aa26.81■■□□□ 1.88
SPSB3-202ENST00000563668 SUPT6HQ7KZ85 1726 aaKnown RBP26.8■■□□□ 1.88
SPSB3-202ENST00000563668 MLECQ14165 292 aa26.8■■□□□ 1.88
SPSB3-202ENST00000563668 MADDQ8WXG6 1647 aa26.79■■□□□ 1.88
SPSB3-202ENST00000563668 DIP2CQ9Y2E4 1556 aa26.79■■□□□ 1.88
SPSB3-202ENST00000563668 C9orf84Q5VXU9 1444 aa26.79■■□□□ 1.88
SPSB3-202ENST00000563668 KIAA1107Q9UPP5 1409 aa26.78■■□□□ 1.88
SPSB3-202ENST00000563668 MAP3K1Q13233 1512 aa26.78■■□□□ 1.88
SPSB3-202ENST00000563668 ABCA6Q8N139 1617 aa26.78■■□□□ 1.88
SPSB3-202ENST00000563668 KIDINS220Q9ULH0 1771 aa26.77■■□□□ 1.88
SPSB3-202ENST00000563668 PTPRMP28827 1452 aa26.76■■□□□ 1.87
SPSB3-202ENST00000563668 PLEKHH2Q8IVE3 1493 aa26.73■■□□□ 1.87
SPSB3-202ENST00000563668 MBD5Q9P267 1494 aa26.73■■□□□ 1.87
SPSB3-202ENST00000563668 SPAG9O60271 1321 aaKnown RBP26.72■■□□□ 1.87
SPSB3-202ENST00000563668 RIMS1Q86UR5 1692 aaKnown RBP26.69■■□□□ 1.86
SPSB3-202ENST00000563668 REREQ9P2R6 1566 aa26.67■■□□□ 1.86
SPSB3-202ENST00000563668 CAMSAP2Q08AD1 1489 aa26.66■■□□□ 1.86
SPSB3-202ENST00000563668 APLP2Q06481 763 aa26.65■■□□□ 1.86
SPSB3-202ENST00000563668 ATP7AQ04656 1500 aa26.65■■□□□ 1.86
SPSB3-202ENST00000563668 PLPPR3Q6T4P5 718 aa26.65■■□□□ 1.86
SPSB3-202ENST00000563668 INO80Q9ULG1 1556 aaPredicted RBP26.64■■□□□ 1.86
SPSB3-202ENST00000563668 FER1L4A9Z1Z3 1794 aa26.6■■□□□ 1.85
SPSB3-202ENST00000563668 AGLP35573 1532 aa26.6■■□□□ 1.85
SPSB3-202ENST00000563668 MYOM3Q5VTT5 1437 aa26.59■■□□□ 1.85
SPSB3-202ENST00000563668 CEBPAP49715 358 aaPredicted RBP26.56■■□□□ 1.84
SPSB3-202ENST00000563668 CCDC141Q6ZP82 1450 aa26.56■■□□□ 1.84
SPSB3-202ENST00000563668 A2MP01023 1474 aa26.54■■□□□ 1.84
SPSB3-202ENST00000563668 RTEL1-TNFRSF6BF6WH68 1400 aa26.53■■□□□ 1.84
SPSB3-202ENST00000563668 MIA2Q96PC5 1412 aa26.52■■□□□ 1.84
SPSB3-202ENST00000563668 PLXNC1O60486 1568 aa26.52■■□□□ 1.84
SPSB3-202ENST00000563668 RSPH4AQ5TD94 716 aa26.51■■□□□ 1.83
SPSB3-202ENST00000563668 ARHGEF5Q12774 1597 aa26.51■■□□□ 1.83
SPSB3-202ENST00000563668 ADGBQ8N7X0 1667 aa26.46■■□□□ 1.83
SPSB3-202ENST00000563668 LMTK3Q96Q04 1460 aa26.45■■□□□ 1.82
SPSB3-202ENST00000563668 TSPY4P0CV99 314 aa26.44■■□□□ 1.82
SPSB3-202ENST00000563668 TSPY10P0CW01 314 aa26.44■■□□□ 1.82
SPSB3-202ENST00000563668 GGT6Q6P531 493 aa26.44■■□□□ 1.82
SPSB3-202ENST00000563668 DHX29Q7Z478 1369 aaKnown RBP26.44■■□□□ 1.82
SPSB3-202ENST00000563668 PTPN23Q9H3S7 1636 aa26.42■■□□□ 1.82
SPSB3-202ENST00000563668 FGD6Q6ZV73 1430 aa26.41■■□□□ 1.82
SPSB3-202ENST00000563668 ESF1Q9H501 851 aaKnown RBP26.4■■□□□ 1.82
SPSB3-202ENST00000563668 HSPA2P54652 639 aa26.39■■□□□ 1.82
SPSB3-202ENST00000563668 C3P01024 1663 aa26.39■■□□□ 1.82
SPSB3-202ENST00000563668 PPARGC1BQ86YN6 1023 aaKnown RBP26.39■■□□□ 1.81
SPSB3-202ENST00000563668 ABCC5O15440 1437 aa26.38■■□□□ 1.81
SPSB3-202ENST00000563668 MAST1Q9Y2H9 1570 aa26.37■■□□□ 1.81
SPSB3-202ENST00000563668 KIF3BO15066 747 aa26.36■■□□□ 1.81
SPSB3-202ENST00000563668 TCOF1Q13428 1488 aaKnown RBP26.36■■□□□ 1.81
SPSB3-202ENST00000563668 CNTLNQ9NXG0 1405 aa26.34■■□□□ 1.81
SPSB3-202ENST00000563668 ZMYM3Q14202 1370 aa26.34■■□□□ 1.81
SPSB3-202ENST00000563668 CLTCQ00610 1675 aaKnown RBP26.33■■□□□ 1.81
SPSB3-202ENST00000563668 DAPK1P53355 1430 aa26.31■■□□□ 1.8
SPSB3-202ENST00000563668 MROH2AA6NES4 1674 aa26.28■■□□□ 1.8
SPSB3-202ENST00000563668 DNMT1P26358 1616 aaKnown RBP26.28■■□□□ 1.8
SPSB3-202ENST00000563668 CROCC2H7BZ55 1655 aa26.28■■□□□ 1.8
SPSB3-202ENST00000563668 PREX1Q8TCU6 1659 aa26.27■■□□□ 1.8
SPSB3-202ENST00000563668 FAM50AQ14320 339 aaKnown RBP26.27■■□□□ 1.8
SPSB3-202ENST00000563668 CHIC2Q9UKJ5 165 aa26.27■■□□□ 1.8
SPSB3-202ENST00000563668 RRP7BPQ9NSQ0 103 aa26.26■■□□□ 1.79
SPSB3-202ENST00000563668 PPP6R1Q9UPN7 881 aa26.26■■□□□ 1.79
SPSB3-202ENST00000563668 SHANK2Q9UPX8 1470 aa26.25■■□□□ 1.79
SPSB3-202ENST00000563668 SETD1BQ9UPS6 1966 aaKnown RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms