RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-204ENST00000563047 CDK11AQ9UQ88 783 aaPredicted RBP34.92■■■■□ 3.18
GGA2-204ENST00000563047 RIMS1Q86UR5 1692 aaKnown RBP34.92■■■■□ 3.18
GGA2-204ENST00000563047 KIF14Q15058 1648 aa34.9■■■■□ 3.18
GGA2-204ENST00000563047 MYO5CQ9NQX4 1742 aa34.89■■■■□ 3.18
GGA2-204ENST00000563047 EFCAB2Q5VUJ9 269 aa34.87■■■■□ 3.17
GGA2-204ENST00000563047 TROQ12816 1431 aaPredicted RBP34.87■■■■□ 3.17
GGA2-204ENST00000563047 LRRIQ1Q96JM4 1722 aa34.86■■■■□ 3.17
GGA2-204ENST00000563047 PCF11O94913 1555 aaKnown RBP34.86■■■■□ 3.17
GGA2-204ENST00000563047 LMTK3Q96Q04 1460 aa34.84■■■■□ 3.17
GGA2-204ENST00000563047 CLIP1P30622 1438 aa34.78■■■■□ 3.16
GGA2-204ENST00000563047 MLECQ14165 292 aa34.77■■■■□ 3.16
GGA2-204ENST00000563047 ATP10AO60312 1499 aa34.76■■■■□ 3.15
GGA2-204ENST00000563047 ARHGAP5Q13017 1502 aa34.76■■■■□ 3.15
GGA2-204ENST00000563047 PLPPR3Q6T4P5 718 aa34.73■■■■□ 3.15
GGA2-204ENST00000563047 C9orf84Q5VXU9 1444 aa34.72■■■■□ 3.15
GGA2-204ENST00000563047 CASKIN1Q8WXD9 1431 aa34.72■■■■□ 3.15
GGA2-204ENST00000563047 ZNF518AQ6AHZ1 1483 aa34.71■■■■□ 3.15
GGA2-204ENST00000563047 FER1L4A9Z1Z3 1794 aa34.7■■■■□ 3.15
GGA2-204ENST00000563047 AFAP1Q8N556 730 aa34.69■■■■□ 3.14
GGA2-204ENST00000563047 KDM5CP41229 1560 aa34.68■■■■□ 3.14
GGA2-204ENST00000563047 CDC42BPBQ9Y5S2 1711 aa34.68■■■■□ 3.14
GGA2-204ENST00000563047 ARHGEF12Q9NZN5 1544 aa34.66■■■■□ 3.14
GGA2-204ENST00000563047 CCDC18Q5T9S5 1454 aa34.66■■■■□ 3.14
GGA2-204ENST00000563047 HSPA2P54652 639 aa34.64■■■■□ 3.14
GGA2-204ENST00000563047 PREX2Q70Z35 1606 aa34.6■■■■□ 3.13
GGA2-204ENST00000563047 FBXO41Q8TF61 875 aa34.6■■■■□ 3.13
GGA2-204ENST00000563047 DIP2CQ9Y2E4 1556 aa34.57■■■■□ 3.12
GGA2-204ENST00000563047 FYCO1Q9BQS8 1478 aa34.56■■■■□ 3.12
GGA2-204ENST00000563047 MYT1LQ9UL68 1186 aa34.55■■■■□ 3.12
GGA2-204ENST00000563047 ABCC1P33527 1531 aa34.55■■■■□ 3.12
GGA2-204ENST00000563047 TRAPPC8Q9Y2L5 1435 aa34.54■■■■□ 3.12
GGA2-204ENST00000563047 MLH3Q9UHC1 1453 aa34.53■■■■□ 3.12
GGA2-204ENST00000563047 ABCA6Q8N139 1617 aa34.52■■■■□ 3.12
GGA2-204ENST00000563047 REREQ9P2R6 1566 aa34.51■■■■□ 3.12
GGA2-204ENST00000563047 CDC42BPAQ5VT25 1732 aa34.5■■■■□ 3.11
GGA2-204ENST00000563047 CEBPAP49715 358 aaPredicted RBP34.5■■■■□ 3.11
GGA2-204ENST00000563047 ITSN2Q9NZM3 1697 aa34.5■■■■□ 3.11
GGA2-204ENST00000563047 PREX1Q8TCU6 1659 aa34.44■■■■□ 3.1
GGA2-204ENST00000563047 KIDINS220Q9ULH0 1771 aa34.41■■■■□ 3.1
GGA2-204ENST00000563047 AGLP35573 1532 aa34.4■■■■□ 3.1
GGA2-204ENST00000563047 SAMD9LQ8IVG5 1584 aa34.37■■■■□ 3.09
GGA2-204ENST00000563047 GPATCH8Q9UKJ3 1502 aaKnown RBP34.37■■■■□ 3.09
GGA2-204ENST00000563047 ZNF777Q9ULD5 760 aaPredicted RBP34.36■■■■□ 3.09
GGA2-204ENST00000563047 SYCP2Q9BX26 1530 aa34.32■■■■□ 3.08
GGA2-204ENST00000563047 C3P01024 1663 aa34.31■■■■□ 3.08
GGA2-204ENST00000563047 SETD1BQ9UPS6 1966 aaKnown RBP34.31■■■■□ 3.08
GGA2-204ENST00000563047 UHRF1BP1Q6BDS2 1440 aa34.3■■■■□ 3.08
GGA2-204ENST00000563047 HNRNPMP52272 730 aaKnown RBP eCLIP34.28■■■■□ 3.08
GGA2-204ENST00000563047 ESF1Q9H501 851 aaKnown RBP34.25■■■■□ 3.07
GGA2-204ENST00000563047 STRCQ7RTU9 1775 aa34.24■■■■□ 3.07
GGA2-204ENST00000563047 CERKQ8TCT0 537 aa34.24■■■■□ 3.07
GGA2-204ENST00000563047 CFDP1Q9UEE9 299 aaPredicted RBP34.24■■■■□ 3.07
GGA2-204ENST00000563047 SPAG9O60271 1321 aaKnown RBP34.24■■■■□ 3.07
GGA2-204ENST00000563047 CCNB3Q8WWL7 1395 aa34.23■■■■□ 3.07
GGA2-204ENST00000563047 MTUS2Q5JR59 1369 aa34.23■■■■□ 3.07
GGA2-204ENST00000563047 KIAA1107Q9UPP5 1409 aa34.22■■■■□ 3.07
GGA2-204ENST00000563047 PLEKHH2Q8IVE3 1493 aa34.2■■■■□ 3.06
GGA2-204ENST00000563047 CNTLNQ9NXG0 1405 aa34.19■■■■□ 3.06
GGA2-204ENST00000563047 ATP7AQ04656 1500 aa34.18■■■■□ 3.06
GGA2-204ENST00000563047 INO80Q9ULG1 1556 aaPredicted RBP34.15■■■■□ 3.06
GGA2-204ENST00000563047 DMRT2Q9Y5R5 561 aa34.15■■■■□ 3.06
GGA2-204ENST00000563047 SUPT6HQ7KZ85 1726 aaKnown RBP34.15■■■■□ 3.06
GGA2-204ENST00000563047 TIAM1Q13009 1591 aa34.12■■■■□ 3.05
GGA2-204ENST00000563047 PLXNC1O60486 1568 aa34.11■■■■□ 3.05
GGA2-204ENST00000563047 EHBP1L1Q8N3D4 1523 aa34.1■■■■□ 3.05
GGA2-204ENST00000563047 MROH2AA6NES4 1674 aa34.1■■■■□ 3.05
GGA2-204ENST00000563047 CEP162Q5TB80 1403 aa34.1■■■■□ 3.05
GGA2-204ENST00000563047 ZNF644Q9H582 1327 aaPredicted RBP34.09■■■■□ 3.05
GGA2-204ENST00000563047 A2MP01023 1474 aa34.09■■■■□ 3.05
GGA2-204ENST00000563047 ZMYM3Q14202 1370 aa34.07■■■■□ 3.04
GGA2-204ENST00000563047 NPATQ14207 1427 aa34.04■■■■□ 3.04
GGA2-204ENST00000563047 MBD5Q9P267 1494 aa34.04■■■■□ 3.04
GGA2-204ENST00000563047 PTPRTO14522 1441 aa34.04■■■■□ 3.04
GGA2-204ENST00000563047 CLTCQ00610 1675 aaKnown RBP34.01■■■■□ 3.04
GGA2-204ENST00000563047 NCOA1Q15788 1441 aa33.99■■■■□ 3.03
GGA2-204ENST00000563047 ADGBQ8N7X0 1667 aa33.99■■■■□ 3.03
GGA2-204ENST00000563047 GGT6Q6P531 493 aa33.98■■■■□ 3.03
GGA2-204ENST00000563047 RTEL1-TNFRSF6BF6WH68 1400 aa33.94■■■■□ 3.02
GGA2-204ENST00000563047 CAMSAP1Q5T5Y3 1602 aa33.93■■■■□ 3.02
GGA2-204ENST00000563047 NCOA2Q15596 1464 aa33.91■■■■□ 3.02
GGA2-204ENST00000563047 PTPRKQ15262 1439 aa33.91■■■■□ 3.02
GGA2-204ENST00000563047 PPP6R1Q9UPN7 881 aa33.89■■■■□ 3.02
GGA2-204ENST00000563047 MYO3AQ8NEV4 1616 aa33.87■■■■□ 3.01
GGA2-204ENST00000563047 DHX29Q7Z478 1369 aaKnown RBP33.86■■■■□ 3.01
GGA2-204ENST00000563047 LTBP4Q8N2S1 1624 aa33.86■■■■□ 3.01
GGA2-204ENST00000563047 ZNF142P52746 1687 aaPredicted RBP33.85■■■■□ 3.01
GGA2-204ENST00000563047 CAMSAP2Q08AD1 1489 aa33.85■■■■□ 3.01
GGA2-204ENST00000563047 CCDC141Q6ZP82 1450 aa33.84■■■■□ 3.01
GGA2-204ENST00000563047 NCKAP5LQ9HCH0 1330 aa33.81■■■■□ 3
GGA2-204ENST00000563047 CEP170BQ9Y4F5 1589 aaPredicted RBP33.81■■■■□ 3
GGA2-204ENST00000563047 RSPH4AQ5TD94 716 aa33.78■■■■□ 3
GGA2-204ENST00000563047 PLA2R1Q13018 1463 aa33.77■■■■□ 3
GGA2-204ENST00000563047 LOC105371045A0A1W2PR82 267 aa33.76■■■□□ 2.99
GGA2-204ENST00000563047 KIF3BO15066 747 aa33.76■■■□□ 2.99
GGA2-204ENST00000563047 VPS8Q8N3P4 1428 aa33.75■■■□□ 2.99
GGA2-204ENST00000563047 PKD2Q13563 968 aa33.73■■■□□ 2.99
GGA2-204ENST00000563047 TCOF1Q13428 1488 aaKnown RBP33.73■■■□□ 2.99
GGA2-204ENST00000563047 ARHGEF5Q12774 1597 aa33.72■■■□□ 2.99
GGA2-204ENST00000563047 LRRC9Q6ZRR7 1453 aa33.72■■■□□ 2.99
GGA2-204ENST00000563047 IQSEC2Q5JU85 1478 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms