RNA–Protein interactions for RNA: ENST00000562890.1

SCAPER-204, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 671 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-204ENST00000562890 EFCAB2Q5VUJ9 269 aa10.78□□□□□ -0.68
SCAPER-204ENST00000562890 MYO5CQ9NQX4 1742 aa10.78□□□□□ -0.68
SCAPER-204ENST00000562890 CDC42BPBQ9Y5S2 1711 aa10.77□□□□□ -0.69
SCAPER-204ENST00000562890 CFAP74Q9C0B2 1584 aa10.77□□□□□ -0.69
SCAPER-204ENST00000562890 RICTORQ6R327 1708 aa10.76□□□□□ -0.69
SCAPER-204ENST00000562890 FRMPD1Q5SYB0 1578 aa10.76□□□□□ -0.69
SCAPER-204ENST00000562890 DENND4BO75064 1496 aaPredicted RBP10.75□□□□□ -0.69
SCAPER-204ENST00000562890 SCAPERQ9BY12 1400 aa10.74□□□□□ -0.69
SCAPER-204ENST00000562890 CDC42BPAQ5VT25 1732 aa10.72□□□□□ -0.69
SCAPER-204ENST00000562890 ADGRL1O94910 1474 aa10.72□□□□□ -0.69
SCAPER-204ENST00000562890 GPATCH8Q9UKJ3 1502 aaKnown RBP10.71□□□□□ -0.69
SCAPER-204ENST00000562890 PREX2Q70Z35 1606 aa10.7□□□□□ -0.7
SCAPER-204ENST00000562890 ARHGAP5Q13017 1502 aa10.7□□□□□ -0.7
SCAPER-204ENST00000562890 VPS8Q8N3P4 1428 aa10.7□□□□□ -0.7
SCAPER-204ENST00000562890 AFAP1Q8N556 730 aa10.7□□□□□ -0.7
SCAPER-204ENST00000562890 ZMYM4Q5VZL5 1548 aa10.69□□□□□ -0.7
SCAPER-204ENST00000562890 MAGI2Q86UL8 1455 aa10.69□□□□□ -0.7
SCAPER-204ENST00000562890 MTUS2Q5JR59 1369 aa10.69□□□□□ -0.7
SCAPER-204ENST00000562890 ARHGEF12Q9NZN5 1544 aa10.68□□□□□ -0.7
SCAPER-204ENST00000562890 POGZQ7Z3K3 1410 aa10.68□□□□□ -0.7
SCAPER-204ENST00000562890 MAP3K1Q13233 1512 aa10.67□□□□□ -0.7
SCAPER-204ENST00000562890 YEATS2Q9ULM3 1422 aa10.67□□□□□ -0.7
SCAPER-204ENST00000562890 TIAM1Q13009 1591 aa10.66□□□□□ -0.7
SCAPER-204ENST00000562890 CFDP1Q9UEE9 299 aaPredicted RBP10.66□□□□□ -0.7
SCAPER-204ENST00000562890 TRAPPC8Q9Y2L5 1435 aa10.66□□□□□ -0.7
SCAPER-204ENST00000562890 CCNB3Q8WWL7 1395 aa10.65□□□□□ -0.7
SCAPER-204ENST00000562890 KDM5CP41229 1560 aa10.65□□□□□ -0.7
SCAPER-204ENST00000562890 EHBP1L1Q8N3D4 1523 aa10.65□□□□□ -0.7
SCAPER-204ENST00000562890 SIGLEC1Q9BZZ2 1709 aa10.65□□□□□ -0.7
SCAPER-204ENST00000562890 HNRNPMP52272 730 aaKnown RBP eCLIP10.65□□□□□ -0.7
SCAPER-204ENST00000562890 KANK4Q5T7N3 995 aaPredicted RBP10.65□□□□□ -0.7
SCAPER-204ENST00000562890 ZNF777Q9ULD5 760 aaPredicted RBP10.65□□□□□ -0.7
SCAPER-204ENST00000562890 ZNF518AQ6AHZ1 1483 aa10.65□□□□□ -0.7
SCAPER-204ENST00000562890 ADAMTSL3P82987 1691 aa10.65□□□□□ -0.7
SCAPER-204ENST00000562890 ITSN2Q9NZM3 1697 aa10.65□□□□□ -0.7
SCAPER-204ENST00000562890 SAMD9LQ8IVG5 1584 aa10.65□□□□□ -0.71
SCAPER-204ENST00000562890 ABCC1P33527 1531 aa10.64□□□□□ -0.71
SCAPER-204ENST00000562890 ZFYVE16Q7Z3T8 1539 aa10.64□□□□□ -0.71
SCAPER-204ENST00000562890 ATP10AO60312 1499 aa10.64□□□□□ -0.71
SCAPER-204ENST00000562890 MLH3Q9UHC1 1453 aa10.64□□□□□ -0.71
SCAPER-204ENST00000562890 BCORL1Q5H9F3 1711 aa10.64□□□□□ -0.71
SCAPER-204ENST00000562890 ARHGEF40Q8TER5 1519 aa10.63□□□□□ -0.71
SCAPER-204ENST00000562890 LRRC9Q6ZRR7 1453 aa10.63□□□□□ -0.71
SCAPER-204ENST00000562890 KIAA1107Q9UPP5 1409 aa10.63□□□□□ -0.71
SCAPER-204ENST00000562890 SUPT6HQ7KZ85 1726 aaKnown RBP10.63□□□□□ -0.71
SCAPER-204ENST00000562890 ARID4BQ4LE39 1312 aaPredicted RBP10.62□□□□□ -0.71
SCAPER-204ENST00000562890 ZNF644Q9H582 1327 aaPredicted RBP10.62□□□□□ -0.71
SCAPER-204ENST00000562890 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
SCAPER-204ENST00000562890 KIDINS220Q9ULH0 1771 aa10.61□□□□□ -0.71
SCAPER-204ENST00000562890 PLEKHH2Q8IVE3 1493 aa10.6□□□□□ -0.71
SCAPER-204ENST00000562890 MBD5Q9P267 1494 aa10.6□□□□□ -0.71
SCAPER-204ENST00000562890 HECW2Q9P2P5 1572 aa10.6□□□□□ -0.71
SCAPER-204ENST00000562890 C9orf84Q5VXU9 1444 aa10.59□□□□□ -0.71
SCAPER-204ENST00000562890 RSPH4AQ5TD94 716 aa10.59□□□□□ -0.71
SCAPER-204ENST00000562890 MYT1LQ9UL68 1186 aa10.59□□□□□ -0.71
SCAPER-204ENST00000562890 DIP2CQ9Y2E4 1556 aa10.59□□□□□ -0.71
SCAPER-204ENST00000562890 SYCP2Q9BX26 1530 aa10.58□□□□□ -0.72
SCAPER-204ENST00000562890 REREQ9P2R6 1566 aa10.58□□□□□ -0.72
SCAPER-204ENST00000562890 ABCA6Q8N139 1617 aa10.58□□□□□ -0.72
SCAPER-204ENST00000562890 SPAG9O60271 1321 aaKnown RBP10.58□□□□□ -0.72
SCAPER-204ENST00000562890 PTPRMP28827 1452 aa10.57□□□□□ -0.72
SCAPER-204ENST00000562890 APLP2Q06481 763 aa10.57□□□□□ -0.72
SCAPER-204ENST00000562890 MLECQ14165 292 aa10.57□□□□□ -0.72
SCAPER-204ENST00000562890 MADDQ8WXG6 1647 aa10.57□□□□□ -0.72
SCAPER-204ENST00000562890 AGLP35573 1532 aa10.55□□□□□ -0.72
SCAPER-204ENST00000562890 RIMS1Q86UR5 1692 aaKnown RBP10.54□□□□□ -0.72
SCAPER-204ENST00000562890 RTEL1-TNFRSF6BF6WH68 1400 aa10.54□□□□□ -0.72
SCAPER-204ENST00000562890 MIA2Q96PC5 1412 aa10.54□□□□□ -0.72
SCAPER-204ENST00000562890 CAMSAP2Q08AD1 1489 aa10.54□□□□□ -0.72
SCAPER-204ENST00000562890 ATP7AQ04656 1500 aa10.53□□□□□ -0.72
SCAPER-204ENST00000562890 INO80Q9ULG1 1556 aaPredicted RBP10.53□□□□□ -0.72
SCAPER-204ENST00000562890 FER1L4A9Z1Z3 1794 aa10.52□□□□□ -0.72
SCAPER-204ENST00000562890 MYOM3Q5VTT5 1437 aa10.52□□□□□ -0.73
SCAPER-204ENST00000562890 ARHGEF5Q12774 1597 aa10.52□□□□□ -0.73
SCAPER-204ENST00000562890 TSPY4P0CV99 314 aa10.51□□□□□ -0.73
SCAPER-204ENST00000562890 TSPY10P0CW01 314 aa10.51□□□□□ -0.73
SCAPER-204ENST00000562890 ADGBQ8N7X0 1667 aa10.5□□□□□ -0.73
SCAPER-204ENST00000562890 A2MP01023 1474 aa10.5□□□□□ -0.73
SCAPER-204ENST00000562890 CCDC141Q6ZP82 1450 aa10.5□□□□□ -0.73
SCAPER-204ENST00000562890 DHX29Q7Z478 1369 aaKnown RBP10.5□□□□□ -0.73
SCAPER-204ENST00000562890 PLXNC1O60486 1568 aa10.49□□□□□ -0.73
SCAPER-204ENST00000562890 CEBPAP49715 358 aaPredicted RBP10.49□□□□□ -0.73
SCAPER-204ENST00000562890 SETD1BQ9UPS6 1966 aaKnown RBP10.48□□□□□ -0.73
SCAPER-204ENST00000562890 MAPK8IP2Q13387 824 aaPredicted RBP10.47□□□□□ -0.73
SCAPER-204ENST00000562890 MAST1Q9Y2H9 1570 aa10.47□□□□□ -0.73
SCAPER-204ENST00000562890 PTPN23Q9H3S7 1636 aa10.47□□□□□ -0.73
SCAPER-204ENST00000562890 GGT6Q6P531 493 aa10.46□□□□□ -0.73
SCAPER-204ENST00000562890 TCOF1Q13428 1488 aaKnown RBP10.46□□□□□ -0.74
SCAPER-204ENST00000562890 C3P01024 1663 aa10.46□□□□□ -0.74
SCAPER-204ENST00000562890 ABCC5O15440 1437 aa10.45□□□□□ -0.74
SCAPER-204ENST00000562890 FGD6Q6ZV73 1430 aa10.45□□□□□ -0.74
SCAPER-204ENST00000562890 ZMYM3Q14202 1370 aa10.45□□□□□ -0.74
SCAPER-204ENST00000562890 SCAF1Q9H7N4 1312 aaKnown RBP10.45□□□□□ -0.74
SCAPER-204ENST00000562890 LMTK3Q96Q04 1460 aa10.44□□□□□ -0.74
SCAPER-204ENST00000562890 CNTLNQ9NXG0 1405 aa10.44□□□□□ -0.74
SCAPER-204ENST00000562890 KIF3BO15066 747 aa10.44□□□□□ -0.74
SCAPER-204ENST00000562890 ESF1Q9H501 851 aaKnown RBP10.44□□□□□ -0.74
SCAPER-204ENST00000562890 MROH2AA6NES4 1674 aa10.44□□□□□ -0.74
SCAPER-204ENST00000562890 CLTCQ00610 1675 aaKnown RBP10.42□□□□□ -0.74
SCAPER-204ENST00000562890 DAPK1P53355 1430 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms