RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 CFAP74Q9C0B2 1584 aa25.89■■□□□ 1.73
PKD1-226ENST00000562425 BCORL1Q5H9F3 1711 aa25.85■■□□□ 1.73
PKD1-226ENST00000562425 MYO5CQ9NQX4 1742 aa25.85■■□□□ 1.73
PKD1-226ENST00000562425 APLP2Q06481 763 aa25.84■■□□□ 1.73
PKD1-226ENST00000562425 ARHGEF40Q8TER5 1519 aa25.83■■□□□ 1.72
PKD1-226ENST00000562425 ARHGAP5Q13017 1502 aa25.82■■□□□ 1.72
PKD1-226ENST00000562425 EHBP1L1Q8N3D4 1523 aa25.82■■□□□ 1.72
PKD1-226ENST00000562425 DENND4BO75064 1496 aaPredicted RBP25.81■■□□□ 1.72
PKD1-226ENST00000562425 TIAM1Q13009 1591 aa25.8■■□□□ 1.72
PKD1-226ENST00000562425 RICTORQ6R327 1708 aa25.8■■□□□ 1.72
PKD1-226ENST00000562425 MAP3K1Q13233 1512 aa25.78■■□□□ 1.72
PKD1-226ENST00000562425 CCNB3Q8WWL7 1395 aa25.78■■□□□ 1.72
PKD1-226ENST00000562425 MADDQ8WXG6 1647 aa25.77■■□□□ 1.72
PKD1-226ENST00000562425 ARID4BQ4LE39 1312 aaPredicted RBP25.77■■□□□ 1.72
PKD1-226ENST00000562425 SCAPERQ9BY12 1400 aa25.77■■□□□ 1.72
PKD1-226ENST00000562425 PREX2Q70Z35 1606 aa25.74■■□□□ 1.71
PKD1-226ENST00000562425 ZMYM4Q5VZL5 1548 aa25.74■■□□□ 1.71
PKD1-226ENST00000562425 GPATCH8Q9UKJ3 1502 aaKnown RBP25.74■■□□□ 1.71
PKD1-226ENST00000562425 CFDP1Q9UEE9 299 aaPredicted RBP25.73■■□□□ 1.71
PKD1-226ENST00000562425 LRRC9Q6ZRR7 1453 aa25.72■■□□□ 1.71
PKD1-226ENST00000562425 CDC42BPBQ9Y5S2 1711 aa25.71■■□□□ 1.71
PKD1-226ENST00000562425 POGZQ7Z3K3 1410 aa25.71■■□□□ 1.71
PKD1-226ENST00000562425 ZNF777Q9ULD5 760 aaPredicted RBP25.7■■□□□ 1.7
PKD1-226ENST00000562425 MAGI2Q86UL8 1455 aa25.7■■□□□ 1.7
PKD1-226ENST00000562425 CDC42BPAQ5VT25 1732 aa25.69■■□□□ 1.7
PKD1-226ENST00000562425 FBXO41Q8TF61 875 aa25.68■■□□□ 1.7
PKD1-226ENST00000562425 SUPT6HQ7KZ85 1726 aaKnown RBP25.68■■□□□ 1.7
PKD1-226ENST00000562425 NCOA2Q15596 1464 aa25.67■■□□□ 1.7
PKD1-226ENST00000562425 KANK4Q5T7N3 995 aaPredicted RBP25.67■■□□□ 1.7
PKD1-226ENST00000562425 RIMS1Q86UR5 1692 aaKnown RBP25.67■■□□□ 1.7
PKD1-226ENST00000562425 ZFYVE16Q7Z3T8 1539 aa25.67■■□□□ 1.7
PKD1-226ENST00000562425 LMTK3Q96Q04 1460 aa25.66■■□□□ 1.7
PKD1-226ENST00000562425 ZNF518AQ6AHZ1 1483 aa25.64■■□□□ 1.69
PKD1-226ENST00000562425 PLEKHH2Q8IVE3 1493 aa25.62■■□□□ 1.69
PKD1-226ENST00000562425 AFAP1Q8N556 730 aa25.62■■□□□ 1.69
PKD1-226ENST00000562425 ITSN2Q9NZM3 1697 aa25.61■■□□□ 1.69
PKD1-226ENST00000562425 ABCC1P33527 1531 aa25.6■■□□□ 1.69
PKD1-226ENST00000562425 MYT1LQ9UL68 1186 aa25.59■■□□□ 1.69
PKD1-226ENST00000562425 YEATS2Q9ULM3 1422 aa25.59■■□□□ 1.69
PKD1-226ENST00000562425 KIAA1107Q9UPP5 1409 aa25.59■■□□□ 1.69
PKD1-226ENST00000562425 ARHGEF12Q9NZN5 1544 aa25.57■■□□□ 1.68
PKD1-226ENST00000562425 SAMD9LQ8IVG5 1584 aa25.56■■□□□ 1.68
PKD1-226ENST00000562425 HNRNPMP52272 730 aaKnown RBP eCLIP25.56■■□□□ 1.68
PKD1-226ENST00000562425 TRAPPC8Q9Y2L5 1435 aa25.55■■□□□ 1.68
PKD1-226ENST00000562425 SIGLEC1Q9BZZ2 1709 aa25.54■■□□□ 1.68
PKD1-226ENST00000562425 KDM5CP41229 1560 aa25.53■■□□□ 1.68
PKD1-226ENST00000562425 FER1L4A9Z1Z3 1794 aa25.53■■□□□ 1.68
PKD1-226ENST00000562425 ZNF644Q9H582 1327 aaPredicted RBP25.52■■□□□ 1.68
PKD1-226ENST00000562425 SYCP2Q9BX26 1530 aa25.52■■□□□ 1.68
PKD1-226ENST00000562425 MLH3Q9UHC1 1453 aa25.51■■□□□ 1.67
PKD1-226ENST00000562425 ATP10AO60312 1499 aa25.5■■□□□ 1.67
PKD1-226ENST00000562425 C9orf84Q5VXU9 1444 aa25.49■■□□□ 1.67
PKD1-226ENST00000562425 RSPH4AQ5TD94 716 aa25.49■■□□□ 1.67
PKD1-226ENST00000562425 MYOM3Q5VTT5 1437 aa25.48■■□□□ 1.67
PKD1-226ENST00000562425 SPAG9O60271 1321 aaKnown RBP25.48■■□□□ 1.67
PKD1-226ENST00000562425 MIA2Q96PC5 1412 aa25.47■■□□□ 1.67
PKD1-226ENST00000562425 CAMSAP2Q08AD1 1489 aa25.44■■□□□ 1.66
PKD1-226ENST00000562425 MBD5Q9P267 1494 aa25.43■■□□□ 1.66
PKD1-226ENST00000562425 HSPA2P54652 639 aa25.42■■□□□ 1.66
PKD1-226ENST00000562425 MLECQ14165 292 aa25.42■■□□□ 1.66
PKD1-226ENST00000562425 PLPPR3Q6T4P5 718 aa25.39■■□□□ 1.66
PKD1-226ENST00000562425 TSPY4P0CV99 314 aa25.38■■□□□ 1.65
PKD1-226ENST00000562425 TSPY10P0CW01 314 aa25.38■■□□□ 1.65
PKD1-226ENST00000562425 PREX1Q8TCU6 1659 aa25.38■■□□□ 1.65
PKD1-226ENST00000562425 CCDC141Q6ZP82 1450 aa25.37■■□□□ 1.65
PKD1-226ENST00000562425 REREQ9P2R6 1566 aa25.36■■□□□ 1.65
PKD1-226ENST00000562425 DIP2CQ9Y2E4 1556 aa25.36■■□□□ 1.65
PKD1-226ENST00000562425 KIDINS220Q9ULH0 1771 aa25.36■■□□□ 1.65
PKD1-226ENST00000562425 SETD1BQ9UPS6 1966 aaKnown RBP25.35■■□□□ 1.65
PKD1-226ENST00000562425 ATP7AQ04656 1500 aa25.35■■□□□ 1.65
PKD1-226ENST00000562425 RTEL1-TNFRSF6BF6WH68 1400 aa25.35■■□□□ 1.65
PKD1-226ENST00000562425 ARHGEF5Q12774 1597 aa25.34■■□□□ 1.65
PKD1-226ENST00000562425 ABCA6Q8N139 1617 aa25.34■■□□□ 1.65
PKD1-226ENST00000562425 FGD6Q6ZV73 1430 aa25.33■■□□□ 1.65
PKD1-226ENST00000562425 INO80Q9ULG1 1556 aaPredicted RBP25.31■■□□□ 1.64
PKD1-226ENST00000562425 PTPN23Q9H3S7 1636 aa25.28■■□□□ 1.64
PKD1-226ENST00000562425 CERKQ8TCT0 537 aa25.28■■□□□ 1.64
PKD1-226ENST00000562425 AGLP35573 1532 aa25.27■■□□□ 1.64
PKD1-226ENST00000562425 PPARGC1BQ86YN6 1023 aaKnown RBP25.26■■□□□ 1.63
PKD1-226ENST00000562425 UHRF1BP1Q6BDS2 1440 aa25.26■■□□□ 1.63
PKD1-226ENST00000562425 A2MP01023 1474 aa25.26■■□□□ 1.63
PKD1-226ENST00000562425 TCOF1Q13428 1488 aaKnown RBP25.26■■□□□ 1.63
PKD1-226ENST00000562425 DMRT2Q9Y5R5 561 aa25.25■■□□□ 1.63
PKD1-226ENST00000562425 CEBPAP49715 358 aaPredicted RBP25.22■■□□□ 1.63
PKD1-226ENST00000562425 FAM50AQ14320 339 aaKnown RBP25.22■■□□□ 1.63
PKD1-226ENST00000562425 ESF1Q9H501 851 aaKnown RBP25.21■■□□□ 1.63
PKD1-226ENST00000562425 DHX29Q7Z478 1369 aaKnown RBP25.2■■□□□ 1.63
PKD1-226ENST00000562425 ADGBQ8N7X0 1667 aa25.2■■□□□ 1.63
PKD1-226ENST00000562425 STRCQ7RTU9 1775 aa25.19■■□□□ 1.62
PKD1-226ENST00000562425 MAST1Q9Y2H9 1570 aa25.18■■□□□ 1.62
PKD1-226ENST00000562425 C3P01024 1663 aa25.18■■□□□ 1.62
PKD1-226ENST00000562425 ABCC5O15440 1437 aa25.18■■□□□ 1.62
PKD1-226ENST00000562425 CNTLNQ9NXG0 1405 aa25.17■■□□□ 1.62
PKD1-226ENST00000562425 PLXNC1O60486 1568 aa25.16■■□□□ 1.62
PKD1-226ENST00000562425 DAPK1P53355 1430 aa25.16■■□□□ 1.62
PKD1-226ENST00000562425 SHANK2Q9UPX8 1470 aa25.15■■□□□ 1.62
PKD1-226ENST00000562425 DNMT1P26358 1616 aaKnown RBP25.13■■□□□ 1.61
PKD1-226ENST00000562425 PPP6R1Q9UPN7 881 aa25.13■■□□□ 1.61
PKD1-226ENST00000562425 GGT6Q6P531 493 aa25.12■■□□□ 1.61
PKD1-226ENST00000562425 PTPRTO14522 1441 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms