RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 FGD6Q6ZV73 1430 aa35.71■■■■□ 3.31
TMEM249-201ENST00000561638 CDC42BPBQ9Y5S2 1711 aa35.71■■■■□ 3.31
TMEM249-201ENST00000561638 TSPOAP1O95153 1857 aa35.7■■■■□ 3.31
TMEM249-201ENST00000561638 EFCAB2Q5VUJ9 269 aa35.7■■■■□ 3.31
TMEM249-201ENST00000561638 ARAP3Q8WWN8 1544 aa35.7■■■■□ 3.31
TMEM249-201ENST00000561638 MIA2Q96PC5 1412 aa35.7■■■■□ 3.3
TMEM249-201ENST00000561638 FANCAO15360 1455 aa35.68■■■■□ 3.3
TMEM249-201ENST00000561638 TEX14Q8IWB6 1497 aa35.63■■■■□ 3.29
TMEM249-201ENST00000561638 FAM50AQ14320 339 aaKnown RBP35.62■■■■□ 3.29
TMEM249-201ENST00000561638 PTPN23Q9H3S7 1636 aa35.61■■■■□ 3.29
TMEM249-201ENST00000561638 ZNF644Q9H582 1327 aaPredicted RBP35.6■■■■□ 3.29
TMEM249-201ENST00000561638 CFAP74Q9C0B2 1584 aa35.6■■■■□ 3.29
TMEM249-201ENST00000561638 RRBP1Q9P2E9 1410 aaKnown RBP35.59■■■■□ 3.29
TMEM249-201ENST00000561638 CAMSAP2Q08AD1 1489 aa35.58■■■■□ 3.29
TMEM249-201ENST00000561638 PPRC1Q5VV67 1664 aaKnown RBP35.57■■■■□ 3.29
TMEM249-201ENST00000561638 SAMD9LQ8IVG5 1584 aa35.56■■■■□ 3.28
TMEM249-201ENST00000561638 NEO1Q92859 1461 aa35.55■■■■□ 3.28
TMEM249-201ENST00000561638 AKNAQ7Z591 1439 aa35.53■■■■□ 3.28
TMEM249-201ENST00000561638 ADGRL1O94910 1474 aa35.52■■■■□ 3.28
TMEM249-201ENST00000561638 TCOF1Q13428 1488 aaKnown RBP35.52■■■■□ 3.28
TMEM249-201ENST00000561638 PLEKHH2Q8IVE3 1493 aa35.52■■■■□ 3.28
TMEM249-201ENST00000561638 ABCC1P33527 1531 aa35.47■■■■□ 3.27
TMEM249-201ENST00000561638 SYCP2Q9BX26 1530 aa35.47■■■■□ 3.27
TMEM249-201ENST00000561638 HNRNPMP52272 730 aaKnown RBP eCLIP35.46■■■■□ 3.27
TMEM249-201ENST00000561638 SCAPERQ9BY12 1400 aa35.45■■■■□ 3.27
TMEM249-201ENST00000561638 KIAA1107Q9UPP5 1409 aa35.44■■■■□ 3.26
TMEM249-201ENST00000561638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.43■■■■□ 3.26
TMEM249-201ENST00000561638 ITGAEP38570 1179 aa35.41■■■■□ 3.26
TMEM249-201ENST00000561638 TRIM26Q12899 539 aaPredicted RBP35.41■■■■□ 3.26
TMEM249-201ENST00000561638 ARHGEF12Q9NZN5 1544 aa35.39■■■■□ 3.26
TMEM249-201ENST00000561638 MBD5Q9P267 1494 aa35.37■■■■□ 3.25
TMEM249-201ENST00000561638 DENND4BO75064 1496 aaPredicted RBP35.35■■■■□ 3.25
TMEM249-201ENST00000561638 RSPH4AQ5TD94 716 aa35.35■■■■□ 3.25
TMEM249-201ENST00000561638 CCDC141Q6ZP82 1450 aa35.34■■■■□ 3.25
TMEM249-201ENST00000561638 ARHGEF5Q12774 1597 aa35.33■■■■□ 3.25
TMEM249-201ENST00000561638 TRAPPC8Q9Y2L5 1435 aa35.33■■■■□ 3.25
TMEM249-201ENST00000561638 DNMT1P26358 1616 aaKnown RBP35.33■■■■□ 3.25
TMEM249-201ENST00000561638 DAPK1P53355 1430 aa35.32■■■■□ 3.25
TMEM249-201ENST00000561638 POGZQ7Z3K3 1410 aa35.31■■■■□ 3.24
TMEM249-201ENST00000561638 ZNF518AQ6AHZ1 1483 aa35.31■■■■□ 3.24
TMEM249-201ENST00000561638 RAPGEF3O95398 923 aa35.3■■■■□ 3.24
TMEM249-201ENST00000561638 AFAP1Q8N556 730 aa35.3■■■■□ 3.24
TMEM249-201ENST00000561638 ABCC5O15440 1437 aa35.29■■■■□ 3.24
TMEM249-201ENST00000561638 TSPY4P0CV99 314 aa35.29■■■■□ 3.24
TMEM249-201ENST00000561638 TSPY10P0CW01 314 aa35.29■■■■□ 3.24
TMEM249-201ENST00000561638 MYT1LQ9UL68 1186 aa35.24■■■■□ 3.23
TMEM249-201ENST00000561638 CHIC2Q9UKJ5 165 aa35.23■■■■□ 3.23
TMEM249-201ENST00000561638 KDM6BO15054 1643 aa35.22■■■■□ 3.23
TMEM249-201ENST00000561638 COL17A1Q9UMD9 1497 aaPredicted RBP35.22■■■■□ 3.23
TMEM249-201ENST00000561638 CROCC2H7BZ55 1655 aa35.22■■■■□ 3.23
TMEM249-201ENST00000561638 SPAG9O60271 1321 aaKnown RBP35.22■■■■□ 3.23
TMEM249-201ENST00000561638 RICTORQ6R327 1708 aa35.21■■■■□ 3.23
TMEM249-201ENST00000561638 C9orf84Q5VXU9 1444 aa35.21■■■■□ 3.23
TMEM249-201ENST00000561638 SHANK2Q9UPX8 1470 aa35.19■■■■□ 3.22
TMEM249-201ENST00000561638 PTPRKQ15262 1439 aa35.18■■■■□ 3.22
TMEM249-201ENST00000561638 KDM5CP41229 1560 aa35.17■■■■□ 3.22
TMEM249-201ENST00000561638 FRMPD1Q5SYB0 1578 aa35.17■■■■□ 3.22
TMEM249-201ENST00000561638 PCGF6Q9BYE7 350 aa35.13■■■■□ 3.21
TMEM249-201ENST00000561638 HECW2Q9P2P5 1572 aa35.12■■■■□ 3.21
TMEM249-201ENST00000561638 MAST1Q9Y2H9 1570 aa35.1■■■■□ 3.21
TMEM249-201ENST00000561638 ATP7AQ04656 1500 aa35.1■■■■□ 3.21
TMEM249-201ENST00000561638 ZFYVE16Q7Z3T8 1539 aa35.1■■■■□ 3.21
TMEM249-201ENST00000561638 ANKRD30AQ9BXX3 1397 aa35.1■■■■□ 3.21
TMEM249-201ENST00000561638 ZMYM4Q5VZL5 1548 aa35.09■■■■□ 3.21
TMEM249-201ENST00000561638 RTEL1-TNFRSF6BF6WH68 1400 aa35.08■■■■□ 3.21
TMEM249-201ENST00000561638 MLH3Q9UHC1 1453 aa35.08■■■■□ 3.21
TMEM249-201ENST00000561638 INO80Q9ULG1 1556 aaPredicted RBP35.08■■■■□ 3.21
TMEM249-201ENST00000561638 ADGBQ8N7X0 1667 aa35.07■■■■□ 3.2
TMEM249-201ENST00000561638 RRP7BPQ9NSQ0 103 aa35.05■■■■□ 3.2
TMEM249-201ENST00000561638 ROCK1Q13464 1354 aa35.05■■■■□ 3.2
TMEM249-201ENST00000561638 ADGRL2O95490 1459 aa35.04■■■■□ 3.2
TMEM249-201ENST00000561638 NCOA1Q15788 1441 aa35.03■■■■□ 3.2
TMEM249-201ENST00000561638 MAGI2Q86UL8 1455 aa35.03■■■■□ 3.2
TMEM249-201ENST00000561638 KIDINS220Q9ULH0 1771 aa35.03■■■■□ 3.2
TMEM249-201ENST00000561638 KIF15Q9NS87 1388 aa35■■■■□ 3.19
TMEM249-201ENST00000561638 PLXNC1O60486 1568 aa34.99■■■■□ 3.19
TMEM249-201ENST00000561638 YEATS2Q9ULM3 1422 aa34.98■■■■□ 3.19
TMEM249-201ENST00000561638 ABCA6Q8N139 1617 aa34.94■■■■□ 3.18
TMEM249-201ENST00000561638 HFM1A2PYH4 1435 aa34.94■■■■□ 3.18
TMEM249-201ENST00000561638 DIP2CQ9Y2E4 1556 aa34.91■■■■□ 3.18
TMEM249-201ENST00000561638 ARHGEF40Q8TER5 1519 aa34.91■■■■□ 3.18
TMEM249-201ENST00000561638 NAIPQ13075 1403 aa34.9■■■■□ 3.18
TMEM249-201ENST00000561638 DUOX2Q9NRD8 1548 aa34.89■■■■□ 3.18
TMEM249-201ENST00000561638 A2MP01023 1474 aa34.86■■■■□ 3.17
TMEM249-201ENST00000561638 GCC2Q8IWJ2 1684 aa34.86■■■■□ 3.17
TMEM249-201ENST00000561638 ATP10AO60312 1499 aa34.86■■■■□ 3.17
TMEM249-201ENST00000561638 ANKRD50Q9ULJ7 1429 aa34.85■■■■□ 3.17
TMEM249-201ENST00000561638 SETD5Q9C0A6 1442 aa34.84■■■■□ 3.17
TMEM249-201ENST00000561638 DHX29Q7Z478 1369 aaKnown RBP34.83■■■■□ 3.17
TMEM249-201ENST00000561638 ERBINQ96RT1 1412 aa34.81■■■■□ 3.16
TMEM249-201ENST00000561638 RAB3GAP2Q9H2M9 1393 aa34.76■■■■□ 3.16
TMEM249-201ENST00000561638 REREQ9P2R6 1566 aa34.73■■■■□ 3.15
TMEM249-201ENST00000561638 KIF3BO15066 747 aa34.72■■■■□ 3.15
TMEM249-201ENST00000561638 ARID4BQ4LE39 1312 aaPredicted RBP34.71■■■■□ 3.15
TMEM249-201ENST00000561638 EIF2AK4Q9P2K8 1649 aaKnown RBP34.69■■■■□ 3.14
TMEM249-201ENST00000561638 AGLP35573 1532 aa34.63■■■■□ 3.13
TMEM249-201ENST00000561638 TRIM52Q96A61 297 aa34.63■■■■□ 3.13
TMEM249-201ENST00000561638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.62■■■■□ 3.13
TMEM249-201ENST00000561638 GGT6Q6P531 493 aa34.62■■■■□ 3.13
TMEM249-201ENST00000561638 SIGLEC1Q9BZZ2 1709 aa34.61■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms